RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 STAC3Q96MF2 364 aa35.4■■■■□ 3.26
USP44-205ENST00000549639 DHX57Q6P158 1386 aaKnown RBP35.38■■■■□ 3.25
USP44-205ENST00000549639 CFAP70Q5T0N1 1121 aa35.35■■■■□ 3.25
USP44-205ENST00000549639 WAPLQ7Z5K2 1190 aa35.35■■■■□ 3.25
USP44-205ENST00000549639 ORAI2Q96SN7 254 aa35.34■■■■□ 3.25
USP44-205ENST00000549639 LRP6O75581 1613 aa35.33■■■■□ 3.25
USP44-205ENST00000549639 MEX3CQ5U5Q3 659 aaKnown RBP35.33■■■■□ 3.25
USP44-205ENST00000549639 POTEAQ6S8J7 498 aa35.3■■■■□ 3.24
USP44-205ENST00000549639 DDX17Q92841 729 aaKnown RBP35.29■■■■□ 3.24
USP44-205ENST00000549639 SOS2Q07890 1332 aaPredicted RBP35.29■■■■□ 3.24
USP44-205ENST00000549639 PLEKHH1Q9ULM0 1364 aa35.27■■■■□ 3.24
USP44-205ENST00000549639 DCAF11Q8TEB1 546 aa35.27■■■■□ 3.24
USP44-205ENST00000549639 ESCO1Q5FWF5 840 aa35.26■■■■□ 3.24
USP44-205ENST00000549639 PNPLA6Q8IY17 1366 aa35.25■■■■□ 3.23
USP44-205ENST00000549639 ZNF772Q68DY9 489 aaPredicted RBP35.25■■■■□ 3.23
USP44-205ENST00000549639 NUTM2BA6NNL0 878 aaPredicted RBP35.23■■■■□ 3.23
USP44-205ENST00000549639 NUTM2EB1AL46 878 aaPredicted RBP35.23■■■■□ 3.23
USP44-205ENST00000549639 NUTM2AQ8IVF1 878 aaPredicted RBP35.23■■■■□ 3.23
USP44-205ENST00000549639 NPHP3Q7Z494 1330 aa35.23■■■■□ 3.23
USP44-205ENST00000549639 DLC1Q96QB1 1528 aa35.22■■■■□ 3.23
USP44-205ENST00000549639 KDM2AQ9Y2K7 1162 aa35.22■■■■□ 3.23
USP44-205ENST00000549639 ADGRB1O14514 1584 aa35.19■■■■□ 3.22
USP44-205ENST00000549639 FMN2Q9NZ56 1722 aa35.18■■■■□ 3.22
USP44-205ENST00000549639 PRAM1Q96QH2 718 aa35.17■■■■□ 3.22
USP44-205ENST00000549639 POGKQ9P215 609 aa35.15■■■■□ 3.22
USP44-205ENST00000549639 NUTM2FA1L443 756 aa35.13■■■■□ 3.21
USP44-205ENST00000549639 FOXO3O43524 673 aa35.12■■■■□ 3.21
USP44-205ENST00000549639 PXDNQ92626 1479 aa35.1■■■■□ 3.21
USP44-205ENST00000549639 KIF1AQ12756 1690 aa35.1■■■■□ 3.21
USP44-205ENST00000549639 TRAK1Q9UPV9 953 aa35.08■■■■□ 3.21
USP44-205ENST00000549639 AFF2P51816 1311 aa35.07■■■■□ 3.21
USP44-205ENST00000549639 COL22A1Q8NFW1 1626 aaPredicted RBP35.07■■■■□ 3.21
USP44-205ENST00000549639 SAFB2Q14151 953 aaKnown RBP eCLIP35.07■■■■□ 3.2
USP44-205ENST00000549639 ADGRB2O60241 1585 aa35.05■■■■□ 3.2
USP44-205ENST00000549639 C8orf37Q96NL8 207 aa35.04■■■■□ 3.2
USP44-205ENST00000549639 ANKARQ7Z5J8 1434 aa35.03■■■■□ 3.2
USP44-205ENST00000549639 PHF8Q9UPP1 1060 aa35.02■■■■□ 3.2
USP44-205ENST00000549639 EIF3AQ14152 1382 aaKnown RBP35.01■■■■□ 3.2
USP44-205ENST00000549639 RXRBP28702 533 aa35.01■■■■□ 3.2
USP44-205ENST00000549639 ADAMTS2O95450 1211 aa35■■■■□ 3.19
USP44-205ENST00000549639 XPCQ01831 940 aaPredicted RBP34.99■■■■□ 3.19
USP44-205ENST00000549639 NGLY1Q96IV0 654 aa34.99■■■■□ 3.19
USP44-205ENST00000549639 KIAA1210Q9ULL0 1709 aa34.98■■■■□ 3.19
USP44-205ENST00000549639 PSME1Q06323 249 aa34.97■■■■□ 3.19
USP44-205ENST00000549639 KRT28Q7Z3Y7 464 aa34.96■■■■□ 3.19
USP44-205ENST00000549639 SPATA31A3Q5VYP0 1347 aa34.96■■■■□ 3.19
USP44-205ENST00000549639 RGPD8O14715 1765 aaPredicted RBP34.95■■■■□ 3.19
USP44-205ENST00000549639 CDK12Q9NYV4 1490 aaPredicted RBP34.95■■■■□ 3.19
USP44-205ENST00000549639 MINK1Q8N4C8 1332 aaPredicted RBP34.93■■■■□ 3.18
USP44-205ENST00000549639 WASLO00401 505 aaPredicted RBP34.91■■■■□ 3.18
USP44-205ENST00000549639 HIRIP3Q9BW71 556 aaPredicted RBP34.91■■■■□ 3.18
USP44-205ENST00000549639 QTRT2Q9H974 415 aaKnown RBP34.91■■■■□ 3.18
USP44-205ENST00000549639 ARHGEF28Q8N1W1 1705 aaKnown RBP34.9■■■■□ 3.18
USP44-205ENST00000549639 FNBP4Q8N3X1 1017 aaPredicted RBP34.9■■■■□ 3.18
USP44-205ENST00000549639 USP32Q8NFA0 1604 aa34.89■■■■□ 3.18
USP44-205ENST00000549639 RBM6P78332 1123 aaKnown RBP34.89■■■■□ 3.18
USP44-205ENST00000549639 TULP4Q9NRJ4 1543 aa34.89■■■■□ 3.18
USP44-205ENST00000549639 SBNO1A3KN83 1393 aa34.88■■■■□ 3.17
USP44-205ENST00000549639 TNS3Q68CZ2 1445 aa34.87■■■■□ 3.17
USP44-205ENST00000549639 USP21Q9UK80 565 aa34.86■■■■□ 3.17
USP44-205ENST00000549639 PMFBP1Q8TBY8 1022 aa34.83■■■■□ 3.17
USP44-205ENST00000549639 TRPC5Q9UL62 973 aaPredicted RBP34.83■■■■□ 3.17
USP44-205ENST00000549639 MARF1Q9Y4F3 1742 aaKnown RBP34.82■■■■□ 3.16
USP44-205ENST00000549639 ARHGEF10O15013 1369 aa34.82■■■■□ 3.16
USP44-205ENST00000549639 PRR36Q9H6K5 1346 aa34.81■■■■□ 3.16
USP44-205ENST00000549639 GPRASP1Q5JY77 1395 aa34.8■■■■□ 3.16
USP44-205ENST00000549639 L3MBTL2Q969R5 705 aa34.8■■■■□ 3.16
USP44-205ENST00000549639 NBPF1Q3BBV0 1214 aa34.79■■■■□ 3.16
USP44-205ENST00000549639 SIN3AQ96ST3 1273 aa34.76■■■■□ 3.16
USP44-205ENST00000549639 ATRNO75882 1429 aa34.74■■■■□ 3.15
USP44-205ENST00000549639 HAP1P54257 671 aaPredicted RBP34.74■■■■□ 3.15
USP44-205ENST00000549639 ITSN1Q15811 1721 aa34.73■■■■□ 3.15
USP44-205ENST00000549639 LMOD2Q6P5Q4 547 aa34.73■■■■□ 3.15
USP44-205ENST00000549639 NGDNQ8NEJ9 315 aaKnown RBP34.73■■■■□ 3.15
USP44-205ENST00000549639 NUDT16Q96DE0 195 aaKnown RBP34.73■■■■□ 3.15
USP44-205ENST00000549639 ATP7BP35670 1465 aa34.72■■■■□ 3.15
USP44-205ENST00000549639 BCL9LQ86UU0 1499 aa34.72■■■■□ 3.15
USP44-205ENST00000549639 CDK19Q9BWU1 502 aa34.72■■■■□ 3.15
USP44-205ENST00000549639 RGS12O14924 1447 aa34.72■■■■□ 3.15
USP44-205ENST00000549639 NEUROD1Q13562 356 aa34.71■■■■□ 3.15
USP44-205ENST00000549639 TRPM3Q9HCF6 1732 aaPredicted RBP34.69■■■■□ 3.14
USP44-205ENST00000549639 CENPJQ9HC77 1338 aaPredicted RBP34.69■■■■□ 3.14
USP44-205ENST00000549639 SLIT2O94813 1529 aa34.68■■■■□ 3.14
USP44-205ENST00000549639 TRIM26Q12899 539 aaPredicted RBP34.66■■■■□ 3.14
USP44-205ENST00000549639 UNC5CLQ8IV45 518 aa34.66■■■■□ 3.14
USP44-205ENST00000549639 UPF1Q92900 1129 aaKnown RBP eCLIP34.66■■■■□ 3.14
USP44-205ENST00000549639 CCDC61Q9Y6R9 512 aa34.66■■■■□ 3.14
USP44-205ENST00000549639 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.66■■■■□ 3.14
USP44-205ENST00000549639 CABLES1Q8TDN4 633 aa34.65■■■■□ 3.14
USP44-205ENST00000549639 ALS2Q96Q42 1657 aa34.63■■■■□ 3.13
USP44-205ENST00000549639 ABCA3Q99758 1704 aa34.62■■■■□ 3.13
USP44-205ENST00000549639 TRPM1Q7Z4N2 1603 aa34.62■■■■□ 3.13
USP44-205ENST00000549639 GJD4Q96KN9 370 aaPredicted RBP34.61■■■■□ 3.13
USP44-205ENST00000549639 POLR3AO14802 1390 aaPredicted RBP34.6■■■■□ 3.13
USP44-205ENST00000549639 PLEKHG3A1L390 1219 aa34.59■■■■□ 3.13
USP44-205ENST00000549639 TOPAZ1Q8N9V7 1692 aa34.59■■■■□ 3.13
USP44-205ENST00000549639 PAK3O75914 559 aaPredicted RBP34.58■■■■□ 3.13
USP44-205ENST00000549639 ROCK2O75116 1388 aaKnown RBP34.57■■■■□ 3.12
USP44-205ENST00000549639 SRPK2P78362 688 aaKnown RBP34.56■■■■□ 3.12
USP44-205ENST00000549639 NWD2Q9ULI1 1742 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms