RNA–Protein interactions for RNA: ENST00000549524.1

TCHP-207, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 3,428 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-207ENST00000549524 ERVK-7P63135 1459 aa11.29□□□□□ -0.6
TCHP-207ENST00000549524 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
TCHP-207ENST00000549524 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.6
TCHP-207ENST00000549524 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
TCHP-207ENST00000549524 DLC1Q96QB1 1528 aa11.27□□□□□ -0.61
TCHP-207ENST00000549524 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.61
TCHP-207ENST00000549524 TSPOAP1O95153 1857 aa11.27□□□□□ -0.61
TCHP-207ENST00000549524 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
TCHP-207ENST00000549524 RGS3P49796 1198 aa11.26□□□□□ -0.61
TCHP-207ENST00000549524 RGL3Q3MIN7 710 aa11.26□□□□□ -0.61
TCHP-207ENST00000549524 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
TCHP-207ENST00000549524 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
TCHP-207ENST00000549524 WDR43Q15061 677 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCHP-207ENST00000549524 ARXQ96QS3 562 aa11.25□□□□□ -0.61
TCHP-207ENST00000549524 UBR1Q8IWV7 1749 aa11.25□□□□□ -0.61
TCHP-207ENST00000549524 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
TCHP-207ENST00000549524 PANK3Q9H999 370 aa11.24□□□□□ -0.61
TCHP-207ENST00000549524 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
TCHP-207ENST00000549524 FRAT2O75474 233 aaPredicted RBP11.23□□□□□ -0.61
TCHP-207ENST00000549524 TMF1P82094 1093 aa11.22□□□□□ -0.61
TCHP-207ENST00000549524 KIF20BQ96Q89 1820 aa11.22□□□□□ -0.61
TCHP-207ENST00000549524 TULP4Q9NRJ4 1543 aa11.22□□□□□ -0.61
TCHP-207ENST00000549524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
TCHP-207ENST00000549524 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
TCHP-207ENST00000549524 PUS7Q96PZ0 661 aaKnown RBP11.21□□□□□ -0.61
TCHP-207ENST00000549524 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
TCHP-207ENST00000549524 GOLGA2Q08379 1002 aa11.21□□□□□ -0.62
TCHP-207ENST00000549524 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.62
TCHP-207ENST00000549524 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.62
TCHP-207ENST00000549524 C8orf34Q49A92 452 aa11.21□□□□□ -0.62
TCHP-207ENST00000549524 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
TCHP-207ENST00000549524 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
TCHP-207ENST00000549524 PTPRMP28827 1452 aa11.2□□□□□ -0.62
TCHP-207ENST00000549524 KNSTRNQ9Y448 316 aa11.2□□□□□ -0.62
TCHP-207ENST00000549524 AKAP12Q02952 1782 aa11.2□□□□□ -0.62
TCHP-207ENST00000549524 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
TCHP-207ENST00000549524 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
TCHP-207ENST00000549524 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
TCHP-207ENST00000549524 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
TCHP-207ENST00000549524 USP54Q70EL1 1684 aa11.19□□□□□ -0.62
TCHP-207ENST00000549524 BECN1Q14457 450 aa11.19□□□□□ -0.62
TCHP-207ENST00000549524 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
TCHP-207ENST00000549524 CPS1P31327 1500 aa11.18□□□□□ -0.62
TCHP-207ENST00000549524 FAM43AQ8N2R8 423 aa11.18□□□□□ -0.62
TCHP-207ENST00000549524 MON2Q7Z3U7 1717 aa11.18□□□□□ -0.62
TCHP-207ENST00000549524 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
TCHP-207ENST00000549524 MED14O60244 1454 aa11.17□□□□□ -0.62
TCHP-207ENST00000549524 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
TCHP-207ENST00000549524 KIF3BO15066 747 aa11.16□□□□□ -0.62
TCHP-207ENST00000549524 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
TCHP-207ENST00000549524 C3P01024 1663 aa11.16□□□□□ -0.62
TCHP-207ENST00000549524 ZNF142P52746 1687 aaPredicted RBP11.16□□□□□ -0.62
TCHP-207ENST00000549524 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
TCHP-207ENST00000549524 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.62
TCHP-207ENST00000549524 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
TCHP-207ENST00000549524 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
TCHP-207ENST00000549524 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
TCHP-207ENST00000549524 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
TCHP-207ENST00000549524 L1TD1Q5T7N2 865 aaKnown RBP11.13□□□□□ -0.63
TCHP-207ENST00000549524 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
TCHP-207ENST00000549524 TECPR2O15040 1411 aa11.13□□□□□ -0.63
TCHP-207ENST00000549524 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
TCHP-207ENST00000549524 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 PLEKHH1Q9ULM0 1364 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 FER1L4A9Z1Z3 1794 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 ADRA2BP18089 450 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 ADGRF5Q8IZF2 1346 aa11.12□□□□□ -0.63
TCHP-207ENST00000549524 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
TCHP-207ENST00000549524 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
TCHP-207ENST00000549524 NLRP1Q9C000 1473 aa11.11□□□□□ -0.63
TCHP-207ENST00000549524 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
TCHP-207ENST00000549524 RAPGEF3O95398 923 aa11.11□□□□□ -0.63
TCHP-207ENST00000549524 IQSEC2Q5JU85 1478 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 SLIT1O75093 1534 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
TCHP-207ENST00000549524 SLC52A1Q9NWF4 448 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 BCAR3O75815 825 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 POGKQ9P215 609 aa11.1□□□□□ -0.63
TCHP-207ENST00000549524 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
TCHP-207ENST00000549524 APAF1O14727 1248 aa11.09□□□□□ -0.63
TCHP-207ENST00000549524 E9PSI1 815 aa11.09□□□□□ -0.63
TCHP-207ENST00000549524 ITSN1Q15811 1721 aa11.08□□□□□ -0.64
TCHP-207ENST00000549524 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
TCHP-207ENST00000549524 ZNF521Q96K83 1311 aa11.08□□□□□ -0.64
TCHP-207ENST00000549524 IGHDP01880 384 aa11.07□□□□□ -0.64
TCHP-207ENST00000549524 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
TCHP-207ENST00000549524 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
TCHP-207ENST00000549524 COL3A1P02461 1466 aaPredicted RBP11.07□□□□□ -0.64
TCHP-207ENST00000549524 CLUAP1Q96AJ1 413 aa11.07□□□□□ -0.64
TCHP-207ENST00000549524 FAM69CQ0P6D2 419 aa11.06□□□□□ -0.64
TCHP-207ENST00000549524 PDE3AQ14432 1141 aa11.06□□□□□ -0.64
TCHP-207ENST00000549524 NSD2O96028 1365 aa11.06□□□□□ -0.64
TCHP-207ENST00000549524 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
TCHP-207ENST00000549524 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
TCHP-207ENST00000549524 GLIPR1L2Q4G1C9 344 aa11.06□□□□□ -0.64
TCHP-207ENST00000549524 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms