RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
PKP2-206ENST00000549461 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
PKP2-206ENST00000549461 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
PKP2-206ENST00000549461 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
PKP2-206ENST00000549461 ZNF335Q9H4Z2 1342 aaPredicted RBP13.08□□□□□ -0.32
PKP2-206ENST00000549461 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
PKP2-206ENST00000549461 POLR3GLQ9BT43 218 aa13.07□□□□□ -0.32
PKP2-206ENST00000549461 TMF1P82094 1093 aa13.05□□□□□ -0.32
PKP2-206ENST00000549461 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
PKP2-206ENST00000549461 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
PKP2-206ENST00000549461 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
PKP2-206ENST00000549461 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
PKP2-206ENST00000549461 CDK19Q9BWU1 502 aa13.03□□□□□ -0.32
PKP2-206ENST00000549461 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
PKP2-206ENST00000549461 MYOM1P52179 1685 aa13.02□□□□□ -0.32
PKP2-206ENST00000549461 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.33
PKP2-206ENST00000549461 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
PKP2-206ENST00000549461 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
PKP2-206ENST00000549461 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
PKP2-206ENST00000549461 XIRP1Q702N8 1843 aaKnown RBP13□□□□□ -0.33
PKP2-206ENST00000549461 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
PKP2-206ENST00000549461 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
PKP2-206ENST00000549461 NUTM2FA1L443 756 aa13□□□□□ -0.33
PKP2-206ENST00000549461 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
PKP2-206ENST00000549461 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
PKP2-206ENST00000549461 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
PKP2-206ENST00000549461 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
PKP2-206ENST00000549461 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
PKP2-206ENST00000549461 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
PKP2-206ENST00000549461 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
PKP2-206ENST00000549461 CDC42BPGQ6DT37 1551 aa12.97□□□□□ -0.33
PKP2-206ENST00000549461 ATP7BP35670 1465 aa12.97□□□□□ -0.33
PKP2-206ENST00000549461 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
PKP2-206ENST00000549461 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
PKP2-206ENST00000549461 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
PKP2-206ENST00000549461 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
PKP2-206ENST00000549461 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
PKP2-206ENST00000549461 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
PKP2-206ENST00000549461 PANK3Q9H999 370 aa12.95□□□□□ -0.34
PKP2-206ENST00000549461 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
PKP2-206ENST00000549461 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
PKP2-206ENST00000549461 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
PKP2-206ENST00000549461 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
PKP2-206ENST00000549461 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
PKP2-206ENST00000549461 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
PKP2-206ENST00000549461 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
PKP2-206ENST00000549461 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
PKP2-206ENST00000549461 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
PKP2-206ENST00000549461 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
PKP2-206ENST00000549461 A0A1W2PP64 1363 aa12.91□□□□□ -0.34
PKP2-206ENST00000549461 MST1RQ04912 1400 aa12.9□□□□□ -0.34
PKP2-206ENST00000549461 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
PKP2-206ENST00000549461 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
PKP2-206ENST00000549461 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
PKP2-206ENST00000549461 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
PKP2-206ENST00000549461 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
PKP2-206ENST00000549461 MSH6P52701 1360 aa12.9□□□□□ -0.34
PKP2-206ENST00000549461 ORAI2Q96SN7 254 aa12.89□□□□□ -0.35
PKP2-206ENST00000549461 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
PKP2-206ENST00000549461 C1orf167Q5SNV9 1468 aa12.89□□□□□ -0.35
PKP2-206ENST00000549461 DCCP43146 1447 aa12.88□□□□□ -0.35
PKP2-206ENST00000549461 ATF3P18847 181 aa12.88□□□□□ -0.35
PKP2-206ENST00000549461 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
PKP2-206ENST00000549461 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
PKP2-206ENST00000549461 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
PKP2-206ENST00000549461 NINLQ9Y2I6 1382 aa12.87□□□□□ -0.35
PKP2-206ENST00000549461 PLEKHG3A1L390 1219 aa12.87□□□□□ -0.35
PKP2-206ENST00000549461 ACEP12821 1306 aa12.87□□□□□ -0.35
PKP2-206ENST00000549461 AKAP12Q02952 1782 aa12.86□□□□□ -0.35
PKP2-206ENST00000549461 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
PKP2-206ENST00000549461 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
PKP2-206ENST00000549461 MIER1Q8N108 512 aa12.85□□□□□ -0.35
PKP2-206ENST00000549461 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
PKP2-206ENST00000549461 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
PKP2-206ENST00000549461 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
PKP2-206ENST00000549461 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
PKP2-206ENST00000549461 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
PKP2-206ENST00000549461 DDX17Q92841 729 aaKnown RBP12.84□□□□□ -0.35
PKP2-206ENST00000549461 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
PKP2-206ENST00000549461 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
PKP2-206ENST00000549461 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
PKP2-206ENST00000549461 CC2D1BQ5T0F9 858 aaKnown RBP12.83□□□□□ -0.36
PKP2-206ENST00000549461 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
PKP2-206ENST00000549461 USP6P35125 1406 aa12.82□□□□□ -0.36
PKP2-206ENST00000549461 XPCQ01831 940 aaPredicted RBP12.82□□□□□ -0.36
PKP2-206ENST00000549461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
PKP2-206ENST00000549461 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
PKP2-206ENST00000549461 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
PKP2-206ENST00000549461 KNSTRNQ9Y448 316 aa12.82□□□□□ -0.36
PKP2-206ENST00000549461 SSH2Q76I76 1423 aa12.81□□□□□ -0.36
PKP2-206ENST00000549461 FOXO3O43524 673 aa12.81□□□□□ -0.36
PKP2-206ENST00000549461 BRINP3Q76B58 766 aa12.81□□□□□ -0.36
PKP2-206ENST00000549461 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
PKP2-206ENST00000549461 NME9Q86XW9 330 aa12.8□□□□□ -0.36
PKP2-206ENST00000549461 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
PKP2-206ENST00000549461 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
PKP2-206ENST00000549461 FYB1O15117 783 aa12.79□□□□□ -0.36
PKP2-206ENST00000549461 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
PKP2-206ENST00000549461 TTC21BQ7Z4L5 1316 aa12.79□□□□□ -0.36
PKP2-206ENST00000549461 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms