RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 C22orf23Q9BZE7 217 aa17.83■□□□□ 0.45
CACNB3-209ENST00000548860 NUTM2GQ5VZR2 741 aa17.83■□□□□ 0.45
CACNB3-209ENST00000548860 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.45
CACNB3-209ENST00000548860 ARID3AQ99856 593 aa17.83■□□□□ 0.45
CACNB3-209ENST00000548860 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
CACNB3-209ENST00000548860 TAOK2Q9UL54 1235 aa17.82■□□□□ 0.44
CACNB3-209ENST00000548860 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
CACNB3-209ENST00000548860 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
CACNB3-209ENST00000548860 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
CACNB3-209ENST00000548860 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
CACNB3-209ENST00000548860 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
CACNB3-209ENST00000548860 TXNDC2Q86VQ3 553 aa17.8■□□□□ 0.44
CACNB3-209ENST00000548860 ANP32BQ92688 251 aaKnown RBP17.8■□□□□ 0.44
CACNB3-209ENST00000548860 ITSN2Q9NZM3 1697 aa17.79■□□□□ 0.44
CACNB3-209ENST00000548860 NOS1P29475 1434 aa17.79■□□□□ 0.44
CACNB3-209ENST00000548860 IDI1Q13907 227 aa17.79■□□□□ 0.44
CACNB3-209ENST00000548860 MIS18AQ9NYP9 233 aa17.78■□□□□ 0.44
CACNB3-209ENST00000548860 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
CACNB3-209ENST00000548860 MBD5Q9P267 1494 aa17.78■□□□□ 0.44
CACNB3-209ENST00000548860 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
CACNB3-209ENST00000548860 UHRF1BP1Q6BDS2 1440 aa17.77■□□□□ 0.44
CACNB3-209ENST00000548860 GOLGA6L3A6NEY3 463 aa17.77■□□□□ 0.43
CACNB3-209ENST00000548860 CDK19Q9BWU1 502 aa17.77■□□□□ 0.43
CACNB3-209ENST00000548860 ADGRL2O95490 1459 aa17.77■□□□□ 0.43
CACNB3-209ENST00000548860 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
CACNB3-209ENST00000548860 MVPQ14764 893 aaKnown RBP17.76■□□□□ 0.43
CACNB3-209ENST00000548860 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
CACNB3-209ENST00000548860 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
CACNB3-209ENST00000548860 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
CACNB3-209ENST00000548860 TRIM27P14373 513 aa17.75■□□□□ 0.43
CACNB3-209ENST00000548860 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
CACNB3-209ENST00000548860 KDM5CP41229 1560 aa17.75■□□□□ 0.43
CACNB3-209ENST00000548860 FAM83GA6ND36 823 aa17.75■□□□□ 0.43
CACNB3-209ENST00000548860 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
CACNB3-209ENST00000548860 ABCA8O94911 1581 aa17.74■□□□□ 0.43
CACNB3-209ENST00000548860 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
CACNB3-209ENST00000548860 PLA2R1Q13018 1463 aa17.74■□□□□ 0.43
CACNB3-209ENST00000548860 TBC1D2Q9BYX2 928 aa17.74■□□□□ 0.43
CACNB3-209ENST00000548860 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
CACNB3-209ENST00000548860 SCAF11Q99590 1463 aaKnown RBP17.73■□□□□ 0.43
CACNB3-209ENST00000548860 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-209ENST00000548860 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
CACNB3-209ENST00000548860 SAMD9LQ8IVG5 1584 aa17.71■□□□□ 0.43
CACNB3-209ENST00000548860 GOLGA6L22H0YM25 854 aa17.71■□□□□ 0.43
CACNB3-209ENST00000548860 FAM69CQ0P6D2 419 aa17.71■□□□□ 0.43
CACNB3-209ENST00000548860 TRIM6-TRIM34B2RNG4 842 aa17.71■□□□□ 0.43
CACNB3-209ENST00000548860 KDM2BQ8NHM5 1336 aa17.71■□□□□ 0.43
CACNB3-209ENST00000548860 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
CACNB3-209ENST00000548860 ADGBQ8N7X0 1667 aa17.7■□□□□ 0.42
CACNB3-209ENST00000548860 GPRASP1Q5JY77 1395 aa17.7■□□□□ 0.42
CACNB3-209ENST00000548860 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
CACNB3-209ENST00000548860 NME9Q86XW9 330 aa17.7■□□□□ 0.42
CACNB3-209ENST00000548860 COG3Q96JB2 828 aa17.7■□□□□ 0.42
CACNB3-209ENST00000548860 RILPL2Q969X0 211 aa17.68■□□□□ 0.42
CACNB3-209ENST00000548860 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
CACNB3-209ENST00000548860 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
CACNB3-209ENST00000548860 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
CACNB3-209ENST00000548860 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
CACNB3-209ENST00000548860 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
CACNB3-209ENST00000548860 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
CACNB3-209ENST00000548860 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
CACNB3-209ENST00000548860 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
CACNB3-209ENST00000548860 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
CACNB3-209ENST00000548860 SMARCA5O60264 1052 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-209ENST00000548860 TRAK2O60296 914 aa17.66■□□□□ 0.42
CACNB3-209ENST00000548860 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
CACNB3-209ENST00000548860 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-209ENST00000548860 TWISTNBQ3B726 338 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-209ENST00000548860 MPNDQ8N594 471 aa17.66■□□□□ 0.42
CACNB3-209ENST00000548860 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
CACNB3-209ENST00000548860 PLCH2O75038 1416 aa17.65■□□□□ 0.42
CACNB3-209ENST00000548860 MCM10Q7L590 875 aa17.65■□□□□ 0.42
CACNB3-209ENST00000548860 FANCAO15360 1455 aa17.65■□□□□ 0.42
CACNB3-209ENST00000548860 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
CACNB3-209ENST00000548860 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
CACNB3-209ENST00000548860 AMPHP49418 695 aa17.65■□□□□ 0.42
CACNB3-209ENST00000548860 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
CACNB3-209ENST00000548860 FYB1O15117 783 aa17.64■□□□□ 0.42
CACNB3-209ENST00000548860 EIF2S2P20042 333 aaKnown RBP17.64■□□□□ 0.42
CACNB3-209ENST00000548860 CHMP5Q9NZZ3 219 aa17.64■□□□□ 0.42
CACNB3-209ENST00000548860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.64■□□□□ 0.41
CACNB3-209ENST00000548860 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
CACNB3-209ENST00000548860 CASC1Q6TDU7 716 aa17.63■□□□□ 0.41
CACNB3-209ENST00000548860 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
CACNB3-209ENST00000548860 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
CACNB3-209ENST00000548860 PANK2Q9BZ23 570 aa17.63■□□□□ 0.41
CACNB3-209ENST00000548860 CCDC9Q9Y3X0 531 aaKnown RBP17.63■□□□□ 0.41
CACNB3-209ENST00000548860 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
CACNB3-209ENST00000548860 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
CACNB3-209ENST00000548860 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
CACNB3-209ENST00000548860 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
CACNB3-209ENST00000548860 CDC42BPBQ9Y5S2 1711 aa17.61■□□□□ 0.41
CACNB3-209ENST00000548860 ATAD2Q6PL18 1390 aa17.61■□□□□ 0.41
CACNB3-209ENST00000548860 CROCC2H7BZ55 1655 aa17.61■□□□□ 0.41
CACNB3-209ENST00000548860 SHANK2Q9UPX8 1470 aa17.61■□□□□ 0.41
CACNB3-209ENST00000548860 A0A0G2JS52 829 aa17.61■□□□□ 0.41
CACNB3-209ENST00000548860 CHD1LQ86WJ1 897 aa17.61■□□□□ 0.41
CACNB3-209ENST00000548860 KIF16BQ96L93 1317 aa17.6■□□□□ 0.41
CACNB3-209ENST00000548860 CHD1O14646 1710 aa17.6■□□□□ 0.41
CACNB3-209ENST00000548860 F6X3S4 739 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms