RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
SMARCD1-205ENST00000548573 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 COG6Q9Y2V7 657 aa12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 ADGRB3O60242 1522 aa12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 PANK1Q8TE04 598 aa12.69□□□□□ -0.38
SMARCD1-205ENST00000548573 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 BECN1Q14457 450 aa12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
SMARCD1-205ENST00000548573 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
SMARCD1-205ENST00000548573 ZNF518AQ6AHZ1 1483 aa12.66□□□□□ -0.38
SMARCD1-205ENST00000548573 NOS1P29475 1434 aa12.66□□□□□ -0.38
SMARCD1-205ENST00000548573 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
SMARCD1-205ENST00000548573 SEC24BO95487 1268 aa12.65□□□□□ -0.38
SMARCD1-205ENST00000548573 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
SMARCD1-205ENST00000548573 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.39
SMARCD1-205ENST00000548573 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.39
SMARCD1-205ENST00000548573 PPLO60437 1756 aa12.65□□□□□ -0.39
SMARCD1-205ENST00000548573 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
SMARCD1-205ENST00000548573 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
SMARCD1-205ENST00000548573 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
SMARCD1-205ENST00000548573 UPF2Q9HAU5 1272 aaKnown RBP12.63□□□□□ -0.39
SMARCD1-205ENST00000548573 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
SMARCD1-205ENST00000548573 NSD2O96028 1365 aa12.63□□□□□ -0.39
SMARCD1-205ENST00000548573 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
SMARCD1-205ENST00000548573 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
SMARCD1-205ENST00000548573 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
SMARCD1-205ENST00000548573 MYH16Q9H6N6 1097 aa12.62□□□□□ -0.39
SMARCD1-205ENST00000548573 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
SMARCD1-205ENST00000548573 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
SMARCD1-205ENST00000548573 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
SMARCD1-205ENST00000548573 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
SMARCD1-205ENST00000548573 RLBP1P12271 317 aa12.61□□□□□ -0.39
SMARCD1-205ENST00000548573 MTHFSP49914 203 aa12.61□□□□□ -0.39
SMARCD1-205ENST00000548573 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
SMARCD1-205ENST00000548573 TRAK1Q9UPV9 953 aa12.61□□□□□ -0.39
SMARCD1-205ENST00000548573 PDZRN3Q9UPQ7 1066 aa12.61□□□□□ -0.39
SMARCD1-205ENST00000548573 ANTXR1Q9H6X2 564 aa12.6□□□□□ -0.39
SMARCD1-205ENST00000548573 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
SMARCD1-205ENST00000548573 ANKRD36BQ8N2N9 1353 aa12.59□□□□□ -0.39
SMARCD1-205ENST00000548573 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
SMARCD1-205ENST00000548573 NPATQ14207 1427 aa12.59□□□□□ -0.39
SMARCD1-205ENST00000548573 TNNQ9UQP3 1299 aa12.58□□□□□ -0.39
SMARCD1-205ENST00000548573 ZKSCAN2Q63HK3 967 aa12.58□□□□□ -0.4
SMARCD1-205ENST00000548573 GLI2P10070 1586 aa12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 TULP4Q9NRJ4 1543 aa12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
SMARCD1-205ENST00000548573 ARHGEF28Q8N1W1 1705 aaKnown RBP12.56□□□□□ -0.4
SMARCD1-205ENST00000548573 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
SMARCD1-205ENST00000548573 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
SMARCD1-205ENST00000548573 TMEM132EQ6IEE7 984 aa12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 POGKQ9P215 609 aa12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 ASXL2Q76L83 1435 aa12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
SMARCD1-205ENST00000548573 FRMPD1Q5SYB0 1578 aa12.54□□□□□ -0.4
SMARCD1-205ENST00000548573 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
SMARCD1-205ENST00000548573 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
SMARCD1-205ENST00000548573 CFAP74Q9C0B2 1584 aa12.53□□□□□ -0.4
SMARCD1-205ENST00000548573 PIK3C2BO00750 1634 aa12.53□□□□□ -0.4
SMARCD1-205ENST00000548573 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
SMARCD1-205ENST00000548573 CAMSAP1Q5T5Y3 1602 aa12.53□□□□□ -0.4
SMARCD1-205ENST00000548573 ABCC3O15438 1527 aa12.52□□□□□ -0.4
SMARCD1-205ENST00000548573 ABCC11Q96J66 1382 aa12.52□□□□□ -0.4
SMARCD1-205ENST00000548573 IL16Q14005 1332 aa12.52□□□□□ -0.4
SMARCD1-205ENST00000548573 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.4
SMARCD1-205ENST00000548573 POGZQ7Z3K3 1410 aa12.52□□□□□ -0.41
SMARCD1-205ENST00000548573 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
SMARCD1-205ENST00000548573 NEXMIFQ5QGS0 1516 aa12.51□□□□□ -0.41
SMARCD1-205ENST00000548573 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
SMARCD1-205ENST00000548573 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
SMARCD1-205ENST00000548573 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
SMARCD1-205ENST00000548573 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
SMARCD1-205ENST00000548573 TRIM27P14373 513 aa12.5□□□□□ -0.41
SMARCD1-205ENST00000548573 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
SMARCD1-205ENST00000548573 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
SMARCD1-205ENST00000548573 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
SMARCD1-205ENST00000548573 MED14O60244 1454 aa12.5□□□□□ -0.41
SMARCD1-205ENST00000548573 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
SMARCD1-205ENST00000548573 ANKRD26Q9UPS8 1709 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 CFAP65Q6ZU64 1925 aaKnown RBP12.49□□□□□ -0.41
SMARCD1-205ENST00000548573 A0A1W2PP64 1363 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms