RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
TUBA1C-203ENST00000548470 ROBO1Q9Y6N7 1651 aa16.7■□□□□ 0.26
TUBA1C-203ENST00000548470 NBPF8Q3BBV2 869 aa16.7■□□□□ 0.26
TUBA1C-203ENST00000548470 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
TUBA1C-203ENST00000548470 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
TUBA1C-203ENST00000548470 C1orf167Q5SNV9 1468 aa16.69■□□□□ 0.26
TUBA1C-203ENST00000548470 PLEKHH1Q9ULM0 1364 aa16.68■□□□□ 0.26
TUBA1C-203ENST00000548470 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
TUBA1C-203ENST00000548470 CDC42BPGQ6DT37 1551 aa16.67■□□□□ 0.26
TUBA1C-203ENST00000548470 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
TUBA1C-203ENST00000548470 JCADQ9P266 1359 aa16.66■□□□□ 0.26
TUBA1C-203ENST00000548470 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
TUBA1C-203ENST00000548470 NALCNQ8IZF0 1738 aa16.66■□□□□ 0.26
TUBA1C-203ENST00000548470 KIAA1210Q9ULL0 1709 aa16.65■□□□□ 0.26
TUBA1C-203ENST00000548470 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
TUBA1C-203ENST00000548470 AHDC1Q5TGY3 1603 aaPredicted RBP16.65■□□□□ 0.26
TUBA1C-203ENST00000548470 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.26
TUBA1C-203ENST00000548470 ORAI2Q96SN7 254 aa16.64■□□□□ 0.25
TUBA1C-203ENST00000548470 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
TUBA1C-203ENST00000548470 SPATA31A6Q5VVP1 1343 aa16.63■□□□□ 0.25
TUBA1C-203ENST00000548470 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
TUBA1C-203ENST00000548470 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
TUBA1C-203ENST00000548470 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
TUBA1C-203ENST00000548470 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
TUBA1C-203ENST00000548470 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
TUBA1C-203ENST00000548470 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
TUBA1C-203ENST00000548470 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
TUBA1C-203ENST00000548470 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
TUBA1C-203ENST00000548470 ROCK2O75116 1388 aaKnown RBP16.59■□□□□ 0.25
TUBA1C-203ENST00000548470 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
TUBA1C-203ENST00000548470 PSME1Q06323 249 aa16.58■□□□□ 0.24
TUBA1C-203ENST00000548470 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.24
TUBA1C-203ENST00000548470 CENPJQ9HC77 1338 aaPredicted RBP16.58■□□□□ 0.24
TUBA1C-203ENST00000548470 COL16A1Q07092 1604 aaPredicted RBP16.57■□□□□ 0.24
TUBA1C-203ENST00000548470 FOXO3O43524 673 aa16.57■□□□□ 0.24
TUBA1C-203ENST00000548470 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
TUBA1C-203ENST00000548470 ADGRB2O60241 1585 aa16.56■□□□□ 0.24
TUBA1C-203ENST00000548470 GPRASP1Q5JY77 1395 aa16.56■□□□□ 0.24
TUBA1C-203ENST00000548470 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
TUBA1C-203ENST00000548470 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
TUBA1C-203ENST00000548470 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
TUBA1C-203ENST00000548470 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
TUBA1C-203ENST00000548470 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
TUBA1C-203ENST00000548470 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
TUBA1C-203ENST00000548470 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
TUBA1C-203ENST00000548470 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
TUBA1C-203ENST00000548470 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
TUBA1C-203ENST00000548470 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
TUBA1C-203ENST00000548470 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.24
TUBA1C-203ENST00000548470 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
TUBA1C-203ENST00000548470 PNPLA6Q8IY17 1366 aa16.51■□□□□ 0.23
TUBA1C-203ENST00000548470 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
TUBA1C-203ENST00000548470 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
TUBA1C-203ENST00000548470 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
TUBA1C-203ENST00000548470 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
TUBA1C-203ENST00000548470 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 PRR36Q9H6K5 1346 aa16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 PXDNQ92626 1479 aa16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 PLEKHG3A1L390 1219 aa16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 MEX3CQ5U5Q3 659 aaKnown RBP16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 NGDNQ8NEJ9 315 aaKnown RBP16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
TUBA1C-203ENST00000548470 SRPK2P78362 688 aaKnown RBP16.48■□□□□ 0.23
TUBA1C-203ENST00000548470 PMFBP1Q8TBY8 1022 aa16.48■□□□□ 0.23
TUBA1C-203ENST00000548470 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
TUBA1C-203ENST00000548470 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
TUBA1C-203ENST00000548470 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
TUBA1C-203ENST00000548470 USP47Q96K76 1375 aa16.47■□□□□ 0.23
TUBA1C-203ENST00000548470 SBNO2Q9Y2G9 1366 aa16.47■□□□□ 0.23
TUBA1C-203ENST00000548470 HSPA5P11021 654 aaKnown RBP16.46■□□□□ 0.23
TUBA1C-203ENST00000548470 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
TUBA1C-203ENST00000548470 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.23
TUBA1C-203ENST00000548470 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
TUBA1C-203ENST00000548470 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
TUBA1C-203ENST00000548470 ATP7BP35670 1465 aa16.43■□□□□ 0.22
TUBA1C-203ENST00000548470 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
TUBA1C-203ENST00000548470 BRD4O60885 1362 aaPredicted RBP16.43■□□□□ 0.22
TUBA1C-203ENST00000548470 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
TUBA1C-203ENST00000548470 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
TUBA1C-203ENST00000548470 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
TUBA1C-203ENST00000548470 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
TUBA1C-203ENST00000548470 TNS3Q68CZ2 1445 aa16.42■□□□□ 0.22
TUBA1C-203ENST00000548470 ACEP12821 1306 aa16.42■□□□□ 0.22
TUBA1C-203ENST00000548470 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
TUBA1C-203ENST00000548470 LRP6O75581 1613 aa16.41■□□□□ 0.22
TUBA1C-203ENST00000548470 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
TUBA1C-203ENST00000548470 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
TUBA1C-203ENST00000548470 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
TUBA1C-203ENST00000548470 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
TUBA1C-203ENST00000548470 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
TUBA1C-203ENST00000548470 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.21
TUBA1C-203ENST00000548470 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
TUBA1C-203ENST00000548470 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
TUBA1C-203ENST00000548470 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
TUBA1C-203ENST00000548470 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
TUBA1C-203ENST00000548470 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
TUBA1C-203ENST00000548470 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
TUBA1C-203ENST00000548470 FNBP4Q8N3X1 1017 aaPredicted RBP16.38■□□□□ 0.21
TUBA1C-203ENST00000548470 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
TUBA1C-203ENST00000548470 ITSN1Q15811 1721 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms