RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
PRIM1-203ENST00000548173 WAPLQ7Z5K2 1190 aa11.56□□□□□ -0.56
PRIM1-203ENST00000548173 DCAF11Q8TEB1 546 aa11.56□□□□□ -0.56
PRIM1-203ENST00000548173 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
PRIM1-203ENST00000548173 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
PRIM1-203ENST00000548173 AHDC1Q5TGY3 1603 aaPredicted RBP11.56□□□□□ -0.56
PRIM1-203ENST00000548173 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
PRIM1-203ENST00000548173 LAMC1P11047 1609 aa11.55□□□□□ -0.56
PRIM1-203ENST00000548173 COL16A1Q07092 1604 aaPredicted RBP11.55□□□□□ -0.56
PRIM1-203ENST00000548173 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
PRIM1-203ENST00000548173 C1orf167Q5SNV9 1468 aa11.54□□□□□ -0.56
PRIM1-203ENST00000548173 JCADQ9P266 1359 aa11.54□□□□□ -0.56
PRIM1-203ENST00000548173 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
PRIM1-203ENST00000548173 ADGRB1O14514 1584 aa11.52□□□□□ -0.57
PRIM1-203ENST00000548173 CDC42BPGQ6DT37 1551 aa11.52□□□□□ -0.57
PRIM1-203ENST00000548173 NHSL1Q5SYE7 1610 aa11.51□□□□□ -0.57
PRIM1-203ENST00000548173 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
PRIM1-203ENST00000548173 ORAI2Q96SN7 254 aa11.51□□□□□ -0.57
PRIM1-203ENST00000548173 DDX17Q92841 729 aaKnown RBP11.5□□□□□ -0.57
PRIM1-203ENST00000548173 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
PRIM1-203ENST00000548173 PRAM1Q96QH2 718 aa11.49□□□□□ -0.57
PRIM1-203ENST00000548173 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
PRIM1-203ENST00000548173 LRRC59Q96AG4 307 aaKnown RBP11.48□□□□□ -0.57
PRIM1-203ENST00000548173 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
PRIM1-203ENST00000548173 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
PRIM1-203ENST00000548173 TRAK1Q9UPV9 953 aa11.48□□□□□ -0.57
PRIM1-203ENST00000548173 SOS2Q07890 1332 aaPredicted RBP11.48□□□□□ -0.57
PRIM1-203ENST00000548173 SHPRHQ149N8 1683 aa11.47□□□□□ -0.57
PRIM1-203ENST00000548173 NUTM2FA1L443 756 aa11.47□□□□□ -0.57
PRIM1-203ENST00000548173 SAFB2Q14151 953 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRIM1-203ENST00000548173 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
PRIM1-203ENST00000548173 POGKQ9P215 609 aa11.47□□□□□ -0.57
PRIM1-203ENST00000548173 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
PRIM1-203ENST00000548173 FMN2Q9NZ56 1722 aa11.46□□□□□ -0.58
PRIM1-203ENST00000548173 LRP6O75581 1613 aa11.46□□□□□ -0.58
PRIM1-203ENST00000548173 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
PRIM1-203ENST00000548173 PNPLA6Q8IY17 1366 aa11.44□□□□□ -0.58
PRIM1-203ENST00000548173 KIAA1210Q9ULL0 1709 aa11.44□□□□□ -0.58
PRIM1-203ENST00000548173 SOCS7O14512 581 aa11.44□□□□□ -0.58
PRIM1-203ENST00000548173 FOXO3O43524 673 aa11.44□□□□□ -0.58
PRIM1-203ENST00000548173 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
PRIM1-203ENST00000548173 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
PRIM1-203ENST00000548173 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
PRIM1-203ENST00000548173 NBPF1Q3BBV0 1214 aa11.43□□□□□ -0.58
PRIM1-203ENST00000548173 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
PRIM1-203ENST00000548173 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
PRIM1-203ENST00000548173 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
PRIM1-203ENST00000548173 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
PRIM1-203ENST00000548173 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
PRIM1-203ENST00000548173 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
PRIM1-203ENST00000548173 PXDNQ92626 1479 aa11.42□□□□□ -0.58
PRIM1-203ENST00000548173 ARHGEF28Q8N1W1 1705 aaKnown RBP11.41□□□□□ -0.58
PRIM1-203ENST00000548173 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
PRIM1-203ENST00000548173 MEX3CQ5U5Q3 659 aaKnown RBP11.41□□□□□ -0.58
PRIM1-203ENST00000548173 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
PRIM1-203ENST00000548173 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
PRIM1-203ENST00000548173 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
PRIM1-203ENST00000548173 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
PRIM1-203ENST00000548173 KIF1AQ12756 1690 aa11.4□□□□□ -0.59
PRIM1-203ENST00000548173 PRR36Q9H6K5 1346 aa11.39□□□□□ -0.59
PRIM1-203ENST00000548173 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
PRIM1-203ENST00000548173 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
PRIM1-203ENST00000548173 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
PRIM1-203ENST00000548173 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
PRIM1-203ENST00000548173 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
PRIM1-203ENST00000548173 ZNF772Q68DY9 489 aaPredicted RBP11.37□□□□□ -0.59
PRIM1-203ENST00000548173 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
PRIM1-203ENST00000548173 COL22A1Q8NFW1 1626 aaPredicted RBP11.37□□□□□ -0.59
PRIM1-203ENST00000548173 TRPM1Q7Z4N2 1603 aa11.36□□□□□ -0.59
PRIM1-203ENST00000548173 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
PRIM1-203ENST00000548173 PSME1Q06323 249 aa11.36□□□□□ -0.59
PRIM1-203ENST00000548173 NBPF8Q3BBV2 869 aa11.36□□□□□ -0.59
PRIM1-203ENST00000548173 AFF2P51816 1311 aa11.35□□□□□ -0.59
PRIM1-203ENST00000548173 C8orf37Q96NL8 207 aa11.35□□□□□ -0.59
PRIM1-203ENST00000548173 CDK19Q9BWU1 502 aa11.35□□□□□ -0.59
PRIM1-203ENST00000548173 CENPJQ9HC77 1338 aaPredicted RBP11.35□□□□□ -0.59
PRIM1-203ENST00000548173 ATP7BP35670 1465 aa11.34□□□□□ -0.59
PRIM1-203ENST00000548173 SBNO1A3KN83 1393 aa11.34□□□□□ -0.59
PRIM1-203ENST00000548173 NUDT16Q96DE0 195 aaKnown RBP11.34□□□□□ -0.59
PRIM1-203ENST00000548173 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
PRIM1-203ENST00000548173 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
PRIM1-203ENST00000548173 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
PRIM1-203ENST00000548173 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
PRIM1-203ENST00000548173 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
PRIM1-203ENST00000548173 NGLY1Q96IV0 654 aa11.33□□□□□ -0.6
PRIM1-203ENST00000548173 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
PRIM1-203ENST00000548173 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
PRIM1-203ENST00000548173 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
PRIM1-203ENST00000548173 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 ITSN1Q15811 1721 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
PRIM1-203ENST00000548173 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 RXRBP28702 533 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
PRIM1-203ENST00000548173 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
PRIM1-203ENST00000548173 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
PRIM1-203ENST00000548173 SRPK2P78362 688 aaKnown RBP11.29□□□□□ -0.6
PRIM1-203ENST00000548173 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms