RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 C1orf167Q5SNV9 1468 aa26.98■■□□□ 1.91
PRPF40B-206ENST00000547764 KIAA1210Q9ULL0 1709 aa26.97■■□□□ 1.91
PRPF40B-206ENST00000547764 SAFB2Q14151 953 aaKnown RBP eCLIP26.97■■□□□ 1.91
PRPF40B-206ENST00000547764 POGKQ9P215 609 aa26.97■■□□□ 1.91
PRPF40B-206ENST00000547764 CDC42BPGQ6DT37 1551 aa26.97■■□□□ 1.91
PRPF40B-206ENST00000547764 NBPF1Q3BBV0 1214 aa26.96■■□□□ 1.91
PRPF40B-206ENST00000547764 PHLPP1O60346 1717 aa26.94■■□□□ 1.9
PRPF40B-206ENST00000547764 ORAI2Q96SN7 254 aa26.92■■□□□ 1.9
PRPF40B-206ENST00000547764 AHDC1Q5TGY3 1603 aaPredicted RBP26.91■■□□□ 1.9
PRPF40B-206ENST00000547764 TONSLQ96HA7 1378 aa26.91■■□□□ 1.9
PRPF40B-206ENST00000547764 NUTM2FA1L443 756 aa26.89■■□□□ 1.9
PRPF40B-206ENST00000547764 COL16A1Q07092 1604 aaPredicted RBP26.88■■□□□ 1.89
PRPF40B-206ENST00000547764 DDX17Q92841 729 aaKnown RBP26.87■■□□□ 1.89
PRPF40B-206ENST00000547764 NBPF8Q3BBV2 869 aa26.86■■□□□ 1.89
PRPF40B-206ENST00000547764 ESCO1Q5FWF5 840 aa26.86■■□□□ 1.89
PRPF40B-206ENST00000547764 ARHGEF28Q8N1W1 1705 aaKnown RBP26.86■■□□□ 1.89
PRPF40B-206ENST00000547764 MINK1Q8N4C8 1332 aaPredicted RBP26.86■■□□□ 1.89
PRPF40B-206ENST00000547764 FMN2Q9NZ56 1722 aa26.85■■□□□ 1.89
PRPF40B-206ENST00000547764 HIRIP3Q9BW71 556 aaPredicted RBP26.85■■□□□ 1.89
PRPF40B-206ENST00000547764 NHSL1Q5SYE7 1610 aa26.84■■□□□ 1.89
PRPF40B-206ENST00000547764 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.89
PRPF40B-206ENST00000547764 JCADQ9P266 1359 aa26.83■■□□□ 1.88
PRPF40B-206ENST00000547764 DISP3Q9P2K9 1392 aa26.83■■□□□ 1.88
PRPF40B-206ENST00000547764 ADGRB2O60241 1585 aa26.82■■□□□ 1.88
PRPF40B-206ENST00000547764 MED1Q15648 1581 aaPredicted RBP26.82■■□□□ 1.88
PRPF40B-206ENST00000547764 ROCK2O75116 1388 aaKnown RBP26.8■■□□□ 1.88
PRPF40B-206ENST00000547764 WASLO00401 505 aaPredicted RBP26.78■■□□□ 1.88
PRPF40B-206ENST00000547764 CLSPNQ9HAW4 1339 aa26.78■■□□□ 1.88
PRPF40B-206ENST00000547764 LRRC59Q96AG4 307 aaKnown RBP26.77■■□□□ 1.88
PRPF40B-206ENST00000547764 SOS2Q07890 1332 aaPredicted RBP26.76■■□□□ 1.87
PRPF40B-206ENST00000547764 FOXO3O43524 673 aa26.76■■□□□ 1.87
PRPF40B-206ENST00000547764 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
PRPF40B-206ENST00000547764 RGPD8O14715 1765 aaPredicted RBP26.74■■□□□ 1.87
PRPF40B-206ENST00000547764 NPHP3Q7Z494 1330 aa26.74■■□□□ 1.87
PRPF40B-206ENST00000547764 CENPJQ9HC77 1338 aaPredicted RBP26.74■■□□□ 1.87
PRPF40B-206ENST00000547764 GPRASP1Q5JY77 1395 aa26.73■■□□□ 1.87
PRPF40B-206ENST00000547764 PHF8Q9UPP1 1060 aa26.73■■□□□ 1.87
PRPF40B-206ENST00000547764 EIF3AQ14152 1382 aaKnown RBP26.72■■□□□ 1.87
PRPF40B-206ENST00000547764 USP32Q8NFA0 1604 aa26.72■■□□□ 1.87
PRPF40B-206ENST00000547764 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
PRPF40B-206ENST00000547764 PRR36Q9H6K5 1346 aa26.71■■□□□ 1.87
PRPF40B-206ENST00000547764 SHPRHQ149N8 1683 aa26.71■■□□□ 1.87
PRPF40B-206ENST00000547764 TULP4Q9NRJ4 1543 aa26.7■■□□□ 1.87
PRPF40B-206ENST00000547764 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.87
PRPF40B-206ENST00000547764 XPCQ01831 940 aaPredicted RBP26.7■■□□□ 1.86
PRPF40B-206ENST00000547764 CDK19Q9BWU1 502 aa26.7■■□□□ 1.86
PRPF40B-206ENST00000547764 KIF1AQ12756 1690 aa26.7■■□□□ 1.86
PRPF40B-206ENST00000547764 RALGAPBQ86X10 1494 aa26.69■■□□□ 1.86
PRPF40B-206ENST00000547764 PXDNQ92626 1479 aa26.68■■□□□ 1.86
PRPF40B-206ENST00000547764 CARD11Q9BXL7 1154 aa26.68■■□□□ 1.86
PRPF40B-206ENST00000547764 PNPLA6Q8IY17 1366 aa26.68■■□□□ 1.86
PRPF40B-206ENST00000547764 PMFBP1Q8TBY8 1022 aa26.67■■□□□ 1.86
PRPF40B-206ENST00000547764 PHF23Q9BUL5 403 aaPredicted RBP26.67■■□□□ 1.86
PRPF40B-206ENST00000547764 TIMELESSQ9UNS1 1208 aa26.66■■□□□ 1.86
PRPF40B-206ENST00000547764 NUDT16Q96DE0 195 aaKnown RBP26.65■■□□□ 1.86
PRPF40B-206ENST00000547764 QRICH2Q9H0J4 1663 aa26.65■■□□□ 1.86
PRPF40B-206ENST00000547764 KRT28Q7Z3Y7 464 aa26.64■■□□□ 1.86
PRPF40B-206ENST00000547764 LRP6O75581 1613 aa26.64■■□□□ 1.85
PRPF40B-206ENST00000547764 ATP7BP35670 1465 aa26.63■■□□□ 1.85
PRPF40B-206ENST00000547764 NUTM2BA6NNL0 878 aaPredicted RBP26.63■■□□□ 1.85
PRPF40B-206ENST00000547764 NUTM2EB1AL46 878 aaPredicted RBP26.63■■□□□ 1.85
PRPF40B-206ENST00000547764 NUTM2AQ8IVF1 878 aaPredicted RBP26.63■■□□□ 1.85
PRPF40B-206ENST00000547764 PSME1Q06323 249 aa26.61■■□□□ 1.85
PRPF40B-206ENST00000547764 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
PRPF40B-206ENST00000547764 MEX3CQ5U5Q3 659 aaKnown RBP26.58■■□□□ 1.85
PRPF40B-206ENST00000547764 CABP2Q9NPB3 220 aa26.58■■□□□ 1.85
PRPF40B-206ENST00000547764 RGS17Q9UGC6 210 aaPredicted RBP26.58■■□□□ 1.85
PRPF40B-206ENST00000547764 CCDC61Q9Y6R9 512 aa26.58■■□□□ 1.85
PRPF40B-206ENST00000547764 SPATA31A3Q5VYP0 1347 aa26.58■■□□□ 1.85
PRPF40B-206ENST00000547764 ILDR2Q71H61 639 aa26.57■■□□□ 1.84
PRPF40B-206ENST00000547764 NGDNQ8NEJ9 315 aaKnown RBP26.56■■□□□ 1.84
PRPF40B-206ENST00000547764 EVC2Q86UK5 1308 aa26.56■■□□□ 1.84
PRPF40B-206ENST00000547764 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
PRPF40B-206ENST00000547764 SBNO1A3KN83 1393 aa26.54■■□□□ 1.84
PRPF40B-206ENST00000547764 COL22A1Q8NFW1 1626 aaPredicted RBP26.54■■□□□ 1.84
PRPF40B-206ENST00000547764 TOPAZ1Q8N9V7 1692 aa26.53■■□□□ 1.84
PRPF40B-206ENST00000547764 PLEKHG3A1L390 1219 aa26.52■■□□□ 1.84
PRPF40B-206ENST00000547764 TNS3Q68CZ2 1445 aa26.52■■□□□ 1.84
PRPF40B-206ENST00000547764 SBNO2Q9Y2G9 1366 aa26.51■■□□□ 1.83
PRPF40B-206ENST00000547764 ACEP12821 1306 aa26.49■■□□□ 1.83
PRPF40B-206ENST00000547764 ADAMTS2O95450 1211 aa26.49■■□□□ 1.83
PRPF40B-206ENST00000547764 PPIP5K1Q6PFW1 1433 aa26.48■■□□□ 1.83
PRPF40B-206ENST00000547764 POLR3AO14802 1390 aaPredicted RBP26.48■■□□□ 1.83
PRPF40B-206ENST00000547764 LMOD2Q6P5Q4 547 aa26.48■■□□□ 1.83
PRPF40B-206ENST00000547764 TRPM3Q9HCF6 1732 aaPredicted RBP26.48■■□□□ 1.83
PRPF40B-206ENST00000547764 ST20-MTHFSA0A0A6YYL1 179 aa26.46■■□□□ 1.83
PRPF40B-206ENST00000547764 C8orf37Q96NL8 207 aa26.46■■□□□ 1.83
PRPF40B-206ENST00000547764 CABP1Q9NZU7 370 aa26.46■■□□□ 1.83
PRPF40B-206ENST00000547764 ARHGEF10O15013 1369 aa26.46■■□□□ 1.83
PRPF40B-206ENST00000547764 POTEAQ6S8J7 498 aa26.45■■□□□ 1.82
PRPF40B-206ENST00000547764 PAK3O75914 559 aaPredicted RBP26.44■■□□□ 1.82
PRPF40B-206ENST00000547764 AFF2P51816 1311 aa26.42■■□□□ 1.82
PRPF40B-206ENST00000547764 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
PRPF40B-206ENST00000547764 CABLES1Q8TDN4 633 aa26.42■■□□□ 1.82
PRPF40B-206ENST00000547764 TESK2Q96S53 571 aa26.42■■□□□ 1.82
PRPF40B-206ENST00000547764 USP47Q96K76 1375 aa26.42■■□□□ 1.82
PRPF40B-206ENST00000547764 ZNF772Q68DY9 489 aaPredicted RBP26.41■■□□□ 1.82
PRPF40B-206ENST00000547764 NGLY1Q96IV0 654 aa26.41■■□□□ 1.82
PRPF40B-206ENST00000547764 ALS2Q96Q42 1657 aa26.41■■□□□ 1.82
PRPF40B-206ENST00000547764 ATAD2Q6PL18 1390 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms