RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 SIN3AQ96ST3 1273 aa33.68■■■□□ 2.98
CTDSP2-203ENST00000547701 NHSL1Q5SYE7 1610 aa33.68■■■□□ 2.98
CTDSP2-203ENST00000547701 L3MBTL2Q969R5 705 aa33.66■■■□□ 2.98
CTDSP2-203ENST00000547701 JCADQ9P266 1359 aa33.6■■■□□ 2.97
CTDSP2-203ENST00000547701 ADGRB2O60241 1585 aa33.6■■■□□ 2.97
CTDSP2-203ENST00000547701 MED1Q15648 1581 aaPredicted RBP33.6■■■□□ 2.97
CTDSP2-203ENST00000547701 FMN2Q9NZ56 1722 aa33.6■■■□□ 2.97
CTDSP2-203ENST00000547701 PRAM1Q96QH2 718 aa33.6■■■□□ 2.97
CTDSP2-203ENST00000547701 ARHGEF28Q8N1W1 1705 aaKnown RBP33.56■■■□□ 2.96
CTDSP2-203ENST00000547701 TRAK1Q9UPV9 953 aa33.56■■■□□ 2.96
CTDSP2-203ENST00000547701 DISP3Q9P2K9 1392 aa33.55■■■□□ 2.96
CTDSP2-203ENST00000547701 NEUROD1Q13562 356 aa33.54■■■□□ 2.96
CTDSP2-203ENST00000547701 POGKQ9P215 609 aa33.54■■■□□ 2.96
CTDSP2-203ENST00000547701 SHPRHQ149N8 1683 aa33.54■■■□□ 2.96
CTDSP2-203ENST00000547701 ORAI2Q96SN7 254 aa33.53■■■□□ 2.96
CTDSP2-203ENST00000547701 SOS2Q07890 1332 aaPredicted RBP33.52■■■□□ 2.96
CTDSP2-203ENST00000547701 NBPF1Q3BBV0 1214 aa33.5■■■□□ 2.95
CTDSP2-203ENST00000547701 LRRC59Q96AG4 307 aaKnown RBP33.5■■■□□ 2.95
CTDSP2-203ENST00000547701 TRPM1Q7Z4N2 1603 aa33.49■■■□□ 2.95
CTDSP2-203ENST00000547701 SPATA31A6Q5VVP1 1343 aa33.49■■■□□ 2.95
CTDSP2-203ENST00000547701 ANKARQ7Z5J8 1434 aa33.48■■■□□ 2.95
CTDSP2-203ENST00000547701 CLSPNQ9HAW4 1339 aa33.47■■■□□ 2.95
CTDSP2-203ENST00000547701 ESCO1Q5FWF5 840 aa33.45■■■□□ 2.95
CTDSP2-203ENST00000547701 KIF1AQ12756 1690 aa33.45■■■□□ 2.94
CTDSP2-203ENST00000547701 EIF3AQ14152 1382 aaKnown RBP33.45■■■□□ 2.94
CTDSP2-203ENST00000547701 NPHP3Q7Z494 1330 aa33.44■■■□□ 2.94
CTDSP2-203ENST00000547701 RGPD8O14715 1765 aaPredicted RBP33.42■■■□□ 2.94
CTDSP2-203ENST00000547701 SAFB2Q14151 953 aaKnown RBP eCLIP33.42■■■□□ 2.94
CTDSP2-203ENST00000547701 GPRASP1Q5JY77 1395 aa33.41■■■□□ 2.94
CTDSP2-203ENST00000547701 TONSLQ96HA7 1378 aa33.4■■■□□ 2.94
CTDSP2-203ENST00000547701 WASLO00401 505 aaPredicted RBP33.4■■■□□ 2.94
CTDSP2-203ENST00000547701 USP32Q8NFA0 1604 aa33.39■■■□□ 2.94
CTDSP2-203ENST00000547701 PCGF6Q9BYE7 350 aa33.39■■■□□ 2.94
CTDSP2-203ENST00000547701 PXDNQ92626 1479 aa33.38■■■□□ 2.93
CTDSP2-203ENST00000547701 DDX17Q92841 729 aaKnown RBP33.38■■■□□ 2.93
CTDSP2-203ENST00000547701 TULP4Q9NRJ4 1543 aa33.38■■■□□ 2.93
CTDSP2-203ENST00000547701 NBPF8Q3BBV2 869 aa33.36■■■□□ 2.93
CTDSP2-203ENST00000547701 PNPLA6Q8IY17 1366 aa33.35■■■□□ 2.93
CTDSP2-203ENST00000547701 MINK1Q8N4C8 1332 aaPredicted RBP33.35■■■□□ 2.93
CTDSP2-203ENST00000547701 NUTM2FA1L443 756 aa33.33■■■□□ 2.93
CTDSP2-203ENST00000547701 FOXO3O43524 673 aa33.33■■■□□ 2.93
CTDSP2-203ENST00000547701 TIMELESSQ9UNS1 1208 aa33.33■■■□□ 2.93
CTDSP2-203ENST00000547701 PHF8Q9UPP1 1060 aa33.33■■■□□ 2.93
CTDSP2-203ENST00000547701 ROCK2O75116 1388 aaKnown RBP33.32■■■□□ 2.92
CTDSP2-203ENST00000547701 COL22A1Q8NFW1 1626 aaPredicted RBP33.31■■■□□ 2.92
CTDSP2-203ENST00000547701 HIRIP3Q9BW71 556 aaPredicted RBP33.31■■■□□ 2.92
CTDSP2-203ENST00000547701 CENPJQ9HC77 1338 aaPredicted RBP33.3■■■□□ 2.92
CTDSP2-203ENST00000547701 LRP6O75581 1613 aa33.3■■■□□ 2.92
CTDSP2-203ENST00000547701 RALGAPBQ86X10 1494 aa33.29■■■□□ 2.92
CTDSP2-203ENST00000547701 PRR36Q9H6K5 1346 aa33.28■■■□□ 2.92
CTDSP2-203ENST00000547701 PHF23Q9BUL5 403 aaPredicted RBP33.27■■■□□ 2.92
CTDSP2-203ENST00000547701 RGS17Q9UGC6 210 aaPredicted RBP33.27■■■□□ 2.92
CTDSP2-203ENST00000547701 ATP7BP35670 1465 aa33.26■■■□□ 2.92
CTDSP2-203ENST00000547701 ITSN1Q15811 1721 aa33.26■■■□□ 2.92
CTDSP2-203ENST00000547701 QRICH2Q9H0J4 1663 aa33.23■■■□□ 2.91
CTDSP2-203ENST00000547701 SBNO1A3KN83 1393 aa33.23■■■□□ 2.91
CTDSP2-203ENST00000547701 ILDR2Q71H61 639 aa33.23■■■□□ 2.91
CTDSP2-203ENST00000547701 CDK19Q9BWU1 502 aa33.23■■■□□ 2.91
CTDSP2-203ENST00000547701 KRT28Q7Z3Y7 464 aa33.22■■■□□ 2.91
CTDSP2-203ENST00000547701 SPATA31A3Q5VYP0 1347 aa33.22■■■□□ 2.91
CTDSP2-203ENST00000547701 PSME1Q06323 249 aa33.21■■■□□ 2.91
CTDSP2-203ENST00000547701 NUDT16Q96DE0 195 aaKnown RBP33.21■■■□□ 2.91
CTDSP2-203ENST00000547701 SBNO2Q9Y2G9 1366 aa33.2■■■□□ 2.9
CTDSP2-203ENST00000547701 TOPAZ1Q8N9V7 1692 aa33.19■■■□□ 2.9
CTDSP2-203ENST00000547701 CCDC61Q9Y6R9 512 aa33.18■■■□□ 2.9
CTDSP2-203ENST00000547701 PLEKHG3A1L390 1219 aa33.16■■■□□ 2.9
CTDSP2-203ENST00000547701 TNS3Q68CZ2 1445 aa33.15■■■□□ 2.9
CTDSP2-203ENST00000547701 TRPM3Q9HCF6 1732 aaPredicted RBP33.14■■■□□ 2.9
CTDSP2-203ENST00000547701 POLR3AO14802 1390 aaPredicted RBP33.14■■■□□ 2.9
CTDSP2-203ENST00000547701 CARD11Q9BXL7 1154 aa33.14■■■□□ 2.9
CTDSP2-203ENST00000547701 XPCQ01831 940 aaPredicted RBP33.13■■■□□ 2.89
CTDSP2-203ENST00000547701 PMFBP1Q8TBY8 1022 aa33.13■■■□□ 2.89
CTDSP2-203ENST00000547701 ARHGEF10O15013 1369 aa33.1■■■□□ 2.89
CTDSP2-203ENST00000547701 EVC2Q86UK5 1308 aa33.1■■■□□ 2.89
CTDSP2-203ENST00000547701 NUTM2BA6NNL0 878 aaPredicted RBP33.09■■■□□ 2.89
CTDSP2-203ENST00000547701 NUTM2EB1AL46 878 aaPredicted RBP33.09■■■□□ 2.89
CTDSP2-203ENST00000547701 MEX3CQ5U5Q3 659 aaKnown RBP33.09■■■□□ 2.89
CTDSP2-203ENST00000547701 ZNF772Q68DY9 489 aaPredicted RBP33.09■■■□□ 2.89
CTDSP2-203ENST00000547701 NUTM2AQ8IVF1 878 aaPredicted RBP33.09■■■□□ 2.89
CTDSP2-203ENST00000547701 ALS2Q96Q42 1657 aa33.07■■■□□ 2.89
CTDSP2-203ENST00000547701 NGDNQ8NEJ9 315 aaKnown RBP33.07■■■□□ 2.88
CTDSP2-203ENST00000547701 MARF1Q9Y4F3 1742 aaKnown RBP33.06■■■□□ 2.88
CTDSP2-203ENST00000547701 POTEAQ6S8J7 498 aa33.05■■■□□ 2.88
CTDSP2-203ENST00000547701 SRPK2P78362 688 aaKnown RBP33.04■■■□□ 2.88
CTDSP2-203ENST00000547701 BRD4O60885 1362 aaPredicted RBP33.04■■■□□ 2.88
CTDSP2-203ENST00000547701 SLC24A1O60721 1099 aa33.02■■■□□ 2.88
CTDSP2-203ENST00000547701 FNBP4Q8N3X1 1017 aaPredicted RBP33.01■■■□□ 2.87
CTDSP2-203ENST00000547701 PUS7Q96PZ0 661 aaKnown RBP33.01■■■□□ 2.87
CTDSP2-203ENST00000547701 CABP2Q9NPB3 220 aa33.01■■■□□ 2.87
CTDSP2-203ENST00000547701 ACEP12821 1306 aa33.01■■■□□ 2.87
CTDSP2-203ENST00000547701 PPIP5K1Q6PFW1 1433 aa33■■■□□ 2.87
CTDSP2-203ENST00000547701 AFF2P51816 1311 aa32.99■■■□□ 2.87
CTDSP2-203ENST00000547701 SOCS7O14512 581 aa32.98■■■□□ 2.87
CTDSP2-203ENST00000547701 CCER1Q8TC90 406 aaPredicted RBP32.98■■■□□ 2.87
CTDSP2-203ENST00000547701 ATAD2Q6PL18 1390 aa32.96■■■□□ 2.87
CTDSP2-203ENST00000547701 C8orf37Q96NL8 207 aa32.96■■■□□ 2.87
CTDSP2-203ENST00000547701 ABCA3Q99758 1704 aa32.96■■■□□ 2.87
CTDSP2-203ENST00000547701 ADAMTS2O95450 1211 aa32.95■■■□□ 2.87
CTDSP2-203ENST00000547701 NGLY1Q96IV0 654 aa32.94■■■□□ 2.86
CTDSP2-203ENST00000547701 TESK2Q96S53 571 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms