RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 KIAA1210Q9ULL0 1709 aa34.67■■■■□ 3.14
RBFOX1-209ENST00000547427 PRAM1Q96QH2 718 aa34.67■■■■□ 3.14
RBFOX1-209ENST00000547427 CDC42BPGQ6DT37 1551 aa34.66■■■■□ 3.14
RBFOX1-209ENST00000547427 DLC1Q96QB1 1528 aa34.66■■■■□ 3.14
RBFOX1-209ENST00000547427 SAFB2Q14151 953 aaKnown RBP eCLIP34.65■■■■□ 3.14
RBFOX1-209ENST00000547427 C1orf167Q5SNV9 1468 aa34.63■■■■□ 3.13
RBFOX1-209ENST00000547427 AHDC1Q5TGY3 1603 aaPredicted RBP34.6■■■■□ 3.13
RBFOX1-209ENST00000547427 DISP3Q9P2K9 1392 aa34.59■■■■□ 3.13
RBFOX1-209ENST00000547427 COL16A1Q07092 1604 aaPredicted RBP34.56■■■■□ 3.12
RBFOX1-209ENST00000547427 NUTM2FA1L443 756 aa34.56■■■■□ 3.12
RBFOX1-209ENST00000547427 TONSLQ96HA7 1378 aa34.56■■■■□ 3.12
RBFOX1-209ENST00000547427 NBPF1Q3BBV0 1214 aa34.55■■■■□ 3.12
RBFOX1-209ENST00000547427 ORAI2Q96SN7 254 aa34.55■■■■□ 3.12
RBFOX1-209ENST00000547427 ARHGEF28Q8N1W1 1705 aaKnown RBP34.54■■■■□ 3.12
RBFOX1-209ENST00000547427 FMN2Q9NZ56 1722 aa34.54■■■■□ 3.12
RBFOX1-209ENST00000547427 NHSL1Q5SYE7 1610 aa34.54■■■■□ 3.12
RBFOX1-209ENST00000547427 ESCO1Q5FWF5 840 aa34.53■■■■□ 3.12
RBFOX1-209ENST00000547427 MED1Q15648 1581 aaPredicted RBP34.53■■■■□ 3.12
RBFOX1-209ENST00000547427 JCADQ9P266 1359 aa34.49■■■■□ 3.11
RBFOX1-209ENST00000547427 DDX17Q92841 729 aaKnown RBP34.49■■■■□ 3.11
RBFOX1-209ENST00000547427 MINK1Q8N4C8 1332 aaPredicted RBP34.49■■■■□ 3.11
RBFOX1-209ENST00000547427 HIRIP3Q9BW71 556 aaPredicted RBP34.48■■■■□ 3.11
RBFOX1-209ENST00000547427 TRPM1Q7Z4N2 1603 aa34.48■■■■□ 3.11
RBFOX1-209ENST00000547427 ADGRB2O60241 1585 aa34.45■■■■□ 3.11
RBFOX1-209ENST00000547427 RGPD8O14715 1765 aaPredicted RBP34.44■■■■□ 3.1
RBFOX1-209ENST00000547427 LRRC59Q96AG4 307 aaKnown RBP34.42■■■■□ 3.1
RBFOX1-209ENST00000547427 ROCK2O75116 1388 aaKnown RBP34.41■■■■□ 3.1
RBFOX1-209ENST00000547427 PHF23Q9BUL5 403 aaPredicted RBP34.4■■■■□ 3.1
RBFOX1-209ENST00000547427 SHPRHQ149N8 1683 aa34.39■■■■□ 3.1
RBFOX1-209ENST00000547427 NBPF8Q3BBV2 869 aa34.39■■■■□ 3.1
RBFOX1-209ENST00000547427 NPHP3Q7Z494 1330 aa34.38■■■■□ 3.09
RBFOX1-209ENST00000547427 KIF1AQ12756 1690 aa34.38■■■■□ 3.09
RBFOX1-209ENST00000547427 FOXO3O43524 673 aa34.37■■■■□ 3.09
RBFOX1-209ENST00000547427 EIF3AQ14152 1382 aaKnown RBP34.36■■■■□ 3.09
RBFOX1-209ENST00000547427 WASLO00401 505 aaPredicted RBP34.36■■■■□ 3.09
RBFOX1-209ENST00000547427 SOS2Q07890 1332 aaPredicted RBP34.34■■■■□ 3.09
RBFOX1-209ENST00000547427 SPATA31A6Q5VVP1 1343 aa34.34■■■■□ 3.09
RBFOX1-209ENST00000547427 ANKARQ7Z5J8 1434 aa34.34■■■■□ 3.09
RBFOX1-209ENST00000547427 CENPJQ9HC77 1338 aaPredicted RBP34.33■■■■□ 3.09
RBFOX1-209ENST00000547427 PHF8Q9UPP1 1060 aa34.33■■■■□ 3.09
RBFOX1-209ENST00000547427 CLSPNQ9HAW4 1339 aa34.32■■■■□ 3.09
RBFOX1-209ENST00000547427 USP32Q8NFA0 1604 aa34.31■■■■□ 3.08
RBFOX1-209ENST00000547427 TULP4Q9NRJ4 1543 aa34.3■■■■□ 3.08
RBFOX1-209ENST00000547427 XPCQ01831 940 aaPredicted RBP34.3■■■■□ 3.08
RBFOX1-209ENST00000547427 QRICH2Q9H0J4 1663 aa34.29■■■■□ 3.08
RBFOX1-209ENST00000547427 CCER1Q8TC90 406 aaPredicted RBP34.29■■■■□ 3.08
RBFOX1-209ENST00000547427 NUTM2BA6NNL0 878 aaPredicted RBP34.27■■■■□ 3.08
RBFOX1-209ENST00000547427 NUTM2EB1AL46 878 aaPredicted RBP34.27■■■■□ 3.08
RBFOX1-209ENST00000547427 NUTM2AQ8IVF1 878 aaPredicted RBP34.27■■■■□ 3.08
RBFOX1-209ENST00000547427 PNPLA6Q8IY17 1366 aa34.26■■■■□ 3.08
RBFOX1-209ENST00000547427 MEX3CQ5U5Q3 659 aaKnown RBP34.26■■■■□ 3.08
RBFOX1-209ENST00000547427 PMFBP1Q8TBY8 1022 aa34.26■■■■□ 3.08
RBFOX1-209ENST00000547427 CDK19Q9BWU1 502 aa34.26■■■■□ 3.08
RBFOX1-209ENST00000547427 PXDNQ92626 1479 aa34.26■■■■□ 3.07
RBFOX1-209ENST00000547427 CARD11Q9BXL7 1154 aa34.25■■■■□ 3.07
RBFOX1-209ENST00000547427 RALGAPBQ86X10 1494 aa34.24■■■■□ 3.07
RBFOX1-209ENST00000547427 PRR36Q9H6K5 1346 aa34.24■■■■□ 3.07
RBFOX1-209ENST00000547427 GPRASP1Q5JY77 1395 aa34.23■■■■□ 3.07
RBFOX1-209ENST00000547427 KRT28Q7Z3Y7 464 aa34.23■■■■□ 3.07
RBFOX1-209ENST00000547427 ITSN1Q15811 1721 aa34.23■■■■□ 3.07
RBFOX1-209ENST00000547427 PSME1Q06323 249 aa34.21■■■■□ 3.07
RBFOX1-209ENST00000547427 LRP6O75581 1613 aa34.21■■■■□ 3.07
RBFOX1-209ENST00000547427 NUDT16Q96DE0 195 aaKnown RBP34.2■■■■□ 3.07
RBFOX1-209ENST00000547427 SRPK2P78362 688 aaKnown RBP34.18■■■■□ 3.06
RBFOX1-209ENST00000547427 ATP7BP35670 1465 aa34.17■■■■□ 3.06
RBFOX1-209ENST00000547427 TIMELESSQ9UNS1 1208 aa34.17■■■■□ 3.06
RBFOX1-209ENST00000547427 NGDNQ8NEJ9 315 aaKnown RBP34.15■■■■□ 3.06
RBFOX1-209ENST00000547427 ILDR2Q71H61 639 aa34.14■■■■□ 3.06
RBFOX1-209ENST00000547427 SPATA31A3Q5VYP0 1347 aa34.12■■■■□ 3.05
RBFOX1-209ENST00000547427 COL22A1Q8NFW1 1626 aaPredicted RBP34.12■■■■□ 3.05
RBFOX1-209ENST00000547427 EVC2Q86UK5 1308 aa34.11■■■■□ 3.05
RBFOX1-209ENST00000547427 CABP2Q9NPB3 220 aa34.11■■■■□ 3.05
RBFOX1-209ENST00000547427 CCDC61Q9Y6R9 512 aa34.11■■■■□ 3.05
RBFOX1-209ENST00000547427 LMOD2Q6P5Q4 547 aa34.1■■■■□ 3.05
RBFOX1-209ENST00000547427 TOPAZ1Q8N9V7 1692 aa34.09■■■■□ 3.05
RBFOX1-209ENST00000547427 RGS17Q9UGC6 210 aaPredicted RBP34.09■■■■□ 3.05
RBFOX1-209ENST00000547427 TNS3Q68CZ2 1445 aa34.08■■■■□ 3.05
RBFOX1-209ENST00000547427 ADAMTS2O95450 1211 aa34.07■■■■□ 3.04
RBFOX1-209ENST00000547427 SBNO1A3KN83 1393 aa34.07■■■■□ 3.04
RBFOX1-209ENST00000547427 C8orf37Q96NL8 207 aa34.04■■■■□ 3.04
RBFOX1-209ENST00000547427 TRPM3Q9HCF6 1732 aaPredicted RBP34.02■■■■□ 3.04
RBFOX1-209ENST00000547427 PPIP5K1Q6PFW1 1433 aa34.02■■■■□ 3.04
RBFOX1-209ENST00000547427 ARHGEF10O15013 1369 aa34.01■■■■□ 3.04
RBFOX1-209ENST00000547427 PAK3O75914 559 aaPredicted RBP34.01■■■■□ 3.03
RBFOX1-209ENST00000547427 ACEP12821 1306 aa34.01■■■■□ 3.03
RBFOX1-209ENST00000547427 PLEKHG3A1L390 1219 aa34■■■■□ 3.03
RBFOX1-209ENST00000547427 PLEKHG5O94827 1062 aa34■■■■□ 3.03
RBFOX1-209ENST00000547427 HAP1P54257 671 aaPredicted RBP34■■■■□ 3.03
RBFOX1-209ENST00000547427 ZNF772Q68DY9 489 aaPredicted RBP34■■■■□ 3.03
RBFOX1-209ENST00000547427 SBNO2Q9Y2G9 1366 aa33.98■■■■□ 3.03
RBFOX1-209ENST00000547427 NGLY1Q96IV0 654 aa33.98■■■■□ 3.03
RBFOX1-209ENST00000547427 AFF2P51816 1311 aa33.98■■■■□ 3.03
RBFOX1-209ENST00000547427 POLR3AO14802 1390 aaPredicted RBP33.98■■■■□ 3.03
RBFOX1-209ENST00000547427 POTEAQ6S8J7 498 aa33.97■■■■□ 3.03
RBFOX1-209ENST00000547427 MARF1Q9Y4F3 1742 aaKnown RBP33.96■■■■□ 3.03
RBFOX1-209ENST00000547427 CABP1Q9NZU7 370 aa33.95■■■■□ 3.03
RBFOX1-209ENST00000547427 ALS2Q96Q42 1657 aa33.94■■■■□ 3.02
RBFOX1-209ENST00000547427 ST20-MTHFSA0A0A6YYL1 179 aa33.93■■■■□ 3.02
RBFOX1-209ENST00000547427 CABLES1Q8TDN4 633 aa33.93■■■■□ 3.02
RBFOX1-209ENST00000547427 ATAD2Q6PL18 1390 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms