RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
RBFOX1-207ENST00000547338 WAPLQ7Z5K2 1190 aa24.58■■□□□ 1.53
RBFOX1-207ENST00000547338 CDC42BPGQ6DT37 1551 aa24.58■■□□□ 1.52
RBFOX1-207ENST00000547338 KDM2AQ9Y2K7 1162 aa24.57■■□□□ 1.52
RBFOX1-207ENST00000547338 C1orf167Q5SNV9 1468 aa24.57■■□□□ 1.52
RBFOX1-207ENST00000547338 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
RBFOX1-207ENST00000547338 ILDR2Q71H61 639 aa24.53■■□□□ 1.52
RBFOX1-207ENST00000547338 DLC1Q96QB1 1528 aa24.52■■□□□ 1.52
RBFOX1-207ENST00000547338 SIRT1Q96EB6 747 aa24.51■■□□□ 1.51
RBFOX1-207ENST00000547338 STAC3Q96MF2 364 aa24.51■■□□□ 1.51
RBFOX1-207ENST00000547338 DDX17Q92841 729 aaKnown RBP24.49■■□□□ 1.51
RBFOX1-207ENST00000547338 SIN3AQ96ST3 1273 aa24.49■■□□□ 1.51
RBFOX1-207ENST00000547338 ORAI2Q96SN7 254 aa24.48■■□□□ 1.51
RBFOX1-207ENST00000547338 JCADQ9P266 1359 aa24.48■■□□□ 1.51
RBFOX1-207ENST00000547338 FMN2Q9NZ56 1722 aa24.47■■□□□ 1.51
RBFOX1-207ENST00000547338 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
RBFOX1-207ENST00000547338 PRAM1Q96QH2 718 aa24.45■■□□□ 1.5
RBFOX1-207ENST00000547338 KIAA1210Q9ULL0 1709 aa24.44■■□□□ 1.5
RBFOX1-207ENST00000547338 LRP6O75581 1613 aa24.43■■□□□ 1.5
RBFOX1-207ENST00000547338 ARHGEF28Q8N1W1 1705 aaKnown RBP24.42■■□□□ 1.5
RBFOX1-207ENST00000547338 CENPBP07199 599 aaPredicted RBP24.41■■□□□ 1.5
RBFOX1-207ENST00000547338 L3MBTL2Q969R5 705 aa24.41■■□□□ 1.5
RBFOX1-207ENST00000547338 RGS17Q9UGC6 210 aaPredicted RBP24.41■■□□□ 1.5
RBFOX1-207ENST00000547338 TRAK1Q9UPV9 953 aa24.41■■□□□ 1.5
RBFOX1-207ENST00000547338 ADGRB2O60241 1585 aa24.41■■□□□ 1.5
RBFOX1-207ENST00000547338 SAFB2Q14151 953 aaKnown RBP eCLIP24.4■■□□□ 1.5
RBFOX1-207ENST00000547338 NUTM2FA1L443 756 aa24.39■■□□□ 1.49
RBFOX1-207ENST00000547338 NBPF1Q3BBV0 1214 aa24.38■■□□□ 1.49
RBFOX1-207ENST00000547338 SOS2Q07890 1332 aaPredicted RBP24.38■■□□□ 1.49
RBFOX1-207ENST00000547338 USP32Q8NFA0 1604 aa24.38■■□□□ 1.49
RBFOX1-207ENST00000547338 RGPD8O14715 1765 aaPredicted RBP24.37■■□□□ 1.49
RBFOX1-207ENST00000547338 PXDNQ92626 1479 aa24.36■■□□□ 1.49
RBFOX1-207ENST00000547338 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
RBFOX1-207ENST00000547338 ESCO1Q5FWF5 840 aa24.35■■□□□ 1.49
RBFOX1-207ENST00000547338 PNPLA6Q8IY17 1366 aa24.35■■□□□ 1.49
RBFOX1-207ENST00000547338 POGKQ9P215 609 aa24.35■■□□□ 1.49
RBFOX1-207ENST00000547338 SPATA31A6Q5VVP1 1343 aa24.34■■□□□ 1.49
RBFOX1-207ENST00000547338 LRRC59Q96AG4 307 aaKnown RBP24.32■■□□□ 1.48
RBFOX1-207ENST00000547338 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
RBFOX1-207ENST00000547338 HIRIP3Q9BW71 556 aaPredicted RBP24.31■■□□□ 1.48
RBFOX1-207ENST00000547338 TONSLQ96HA7 1378 aa24.31■■□□□ 1.48
RBFOX1-207ENST00000547338 TRPM1Q7Z4N2 1603 aa24.31■■□□□ 1.48
RBFOX1-207ENST00000547338 KIF1AQ12756 1690 aa24.3■■□□□ 1.48
RBFOX1-207ENST00000547338 MINK1Q8N4C8 1332 aaPredicted RBP24.3■■□□□ 1.48
RBFOX1-207ENST00000547338 FOXO3O43524 673 aa24.29■■□□□ 1.48
RBFOX1-207ENST00000547338 NPHP3Q7Z494 1330 aa24.28■■□□□ 1.48
RBFOX1-207ENST00000547338 PRR36Q9H6K5 1346 aa24.28■■□□□ 1.48
RBFOX1-207ENST00000547338 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
RBFOX1-207ENST00000547338 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
RBFOX1-207ENST00000547338 MIER1Q8N108 512 aa24.27■■□□□ 1.48
RBFOX1-207ENST00000547338 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.47
RBFOX1-207ENST00000547338 TULP4Q9NRJ4 1543 aa24.26■■□□□ 1.47
RBFOX1-207ENST00000547338 NBPF8Q3BBV2 869 aa24.25■■□□□ 1.47
RBFOX1-207ENST00000547338 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
RBFOX1-207ENST00000547338 WASLO00401 505 aaPredicted RBP24.24■■□□□ 1.47
RBFOX1-207ENST00000547338 NUTM2BA6NNL0 878 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-207ENST00000547338 NUTM2EB1AL46 878 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-207ENST00000547338 NUTM2AQ8IVF1 878 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-207ENST00000547338 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
RBFOX1-207ENST00000547338 ATP7BP35670 1465 aa24.21■■□□□ 1.47
RBFOX1-207ENST00000547338 SOCS7O14512 581 aa24.18■■□□□ 1.46
RBFOX1-207ENST00000547338 QRICH2Q9H0J4 1663 aa24.18■■□□□ 1.46
RBFOX1-207ENST00000547338 SPATA31A3Q5VYP0 1347 aa24.17■■□□□ 1.46
RBFOX1-207ENST00000547338 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 GPRASP1Q5JY77 1395 aa24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 TOPAZ1Q8N9V7 1692 aa24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 MEX3CQ5U5Q3 659 aaKnown RBP24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 KRT28Q7Z3Y7 464 aa24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 PMFBP1Q8TBY8 1022 aa24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 TRPM3Q9HCF6 1732 aaPredicted RBP24.16■■□□□ 1.46
RBFOX1-207ENST00000547338 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
RBFOX1-207ENST00000547338 ROCK2O75116 1388 aaKnown RBP24.14■■□□□ 1.46
RBFOX1-207ENST00000547338 CDK19Q9BWU1 502 aa24.14■■□□□ 1.45
RBFOX1-207ENST00000547338 TNS3Q68CZ2 1445 aa24.13■■□□□ 1.45
RBFOX1-207ENST00000547338 ITSN1Q15811 1721 aa24.13■■□□□ 1.45
RBFOX1-207ENST00000547338 NUDT16Q96DE0 195 aaKnown RBP24.12■■□□□ 1.45
RBFOX1-207ENST00000547338 SBNO1A3KN83 1393 aa24.12■■□□□ 1.45
RBFOX1-207ENST00000547338 AFF2P51816 1311 aa24.11■■□□□ 1.45
RBFOX1-207ENST00000547338 RALGAPBQ86X10 1494 aa24.11■■□□□ 1.45
RBFOX1-207ENST00000547338 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
RBFOX1-207ENST00000547338 ALS2Q96Q42 1657 aa24.09■■□□□ 1.45
RBFOX1-207ENST00000547338 MARF1Q9Y4F3 1742 aaKnown RBP24.09■■□□□ 1.45
RBFOX1-207ENST00000547338 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
RBFOX1-207ENST00000547338 ABCA3Q99758 1704 aa24.08■■□□□ 1.45
RBFOX1-207ENST00000547338 PSME1Q06323 249 aa24.07■■□□□ 1.44
RBFOX1-207ENST00000547338 ZNF772Q68DY9 489 aaPredicted RBP24.06■■□□□ 1.44
RBFOX1-207ENST00000547338 POLR3AO14802 1390 aaPredicted RBP24.05■■□□□ 1.44
RBFOX1-207ENST00000547338 CABP2Q9NPB3 220 aa24.04■■□□□ 1.44
RBFOX1-207ENST00000547338 CCDC61Q9Y6R9 512 aa24.03■■□□□ 1.44
RBFOX1-207ENST00000547338 CRYBG1Q9Y4K1 1723 aa24.03■■□□□ 1.44
RBFOX1-207ENST00000547338 PLEKHG3A1L390 1219 aa24.02■■□□□ 1.44
RBFOX1-207ENST00000547338 CABLES1Q8TDN4 633 aa24.02■■□□□ 1.44
RBFOX1-207ENST00000547338 ARHGEF10O15013 1369 aa24.02■■□□□ 1.44
RBFOX1-207ENST00000547338 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
RBFOX1-207ENST00000547338 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
RBFOX1-207ENST00000547338 NGLY1Q96IV0 654 aa24.01■■□□□ 1.43
RBFOX1-207ENST00000547338 ACEP12821 1306 aa24■■□□□ 1.43
RBFOX1-207ENST00000547338 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
RBFOX1-207ENST00000547338 BCL9LQ86UU0 1499 aa23.99■■□□□ 1.43
RBFOX1-207ENST00000547338 PPIP5K1Q6PFW1 1433 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms