RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PPLO60437 1756 aa17.55■□□□□ 0.4
HDAC7-226ENST00000547259 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
HDAC7-226ENST00000547259 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
HDAC7-226ENST00000547259 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
HDAC7-226ENST00000547259 DDX17Q92841 729 aaKnown RBP17.53■□□□□ 0.4
HDAC7-226ENST00000547259 NPHP3Q7Z494 1330 aa17.51■□□□□ 0.39
HDAC7-226ENST00000547259 ADAMTS2O95450 1211 aa17.51■□□□□ 0.39
HDAC7-226ENST00000547259 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
HDAC7-226ENST00000547259 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
HDAC7-226ENST00000547259 CLSPNQ9HAW4 1339 aa17.5■□□□□ 0.39
HDAC7-226ENST00000547259 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-226ENST00000547259 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
HDAC7-226ENST00000547259 USP21Q9UK80 565 aa17.49■□□□□ 0.39
HDAC7-226ENST00000547259 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-226ENST00000547259 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
HDAC7-226ENST00000547259 COL22A1Q8NFW1 1626 aaPredicted RBP17.46■□□□□ 0.39
HDAC7-226ENST00000547259 RGS12O14924 1447 aa17.46■□□□□ 0.39
HDAC7-226ENST00000547259 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
HDAC7-226ENST00000547259 SIN3AQ96ST3 1273 aa17.45■□□□□ 0.38
HDAC7-226ENST00000547259 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
HDAC7-226ENST00000547259 TECPR2O15040 1411 aa17.44■□□□□ 0.38
HDAC7-226ENST00000547259 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
HDAC7-226ENST00000547259 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
HDAC7-226ENST00000547259 IFT172Q9UG01 1749 aa17.43■□□□□ 0.38
HDAC7-226ENST00000547259 FOXO3O43524 673 aa17.42■□□□□ 0.38
HDAC7-226ENST00000547259 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
HDAC7-226ENST00000547259 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
HDAC7-226ENST00000547259 SPATA31E1Q6ZUB1 1445 aa17.41■□□□□ 0.38
HDAC7-226ENST00000547259 CCDC125Q86Z20 511 aa17.41■□□□□ 0.38
HDAC7-226ENST00000547259 STK26Q9P289 416 aa17.41■□□□□ 0.38
HDAC7-226ENST00000547259 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
HDAC7-226ENST00000547259 MARF1Q9Y4F3 1742 aaKnown RBP17.41■□□□□ 0.38
HDAC7-226ENST00000547259 ATRNO75882 1429 aa17.39■□□□□ 0.38
HDAC7-226ENST00000547259 MYOM2P54296 1465 aa17.39■□□□□ 0.37
HDAC7-226ENST00000547259 PXDNQ92626 1479 aa17.39■□□□□ 0.37
HDAC7-226ENST00000547259 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
HDAC7-226ENST00000547259 TONSLQ96HA7 1378 aa17.39■□□□□ 0.37
HDAC7-226ENST00000547259 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
HDAC7-226ENST00000547259 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
HDAC7-226ENST00000547259 PSME1Q06323 249 aa17.36■□□□□ 0.37
HDAC7-226ENST00000547259 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
HDAC7-226ENST00000547259 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
HDAC7-226ENST00000547259 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
HDAC7-226ENST00000547259 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
HDAC7-226ENST00000547259 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
HDAC7-226ENST00000547259 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
HDAC7-226ENST00000547259 SPATA31A3Q5VYP0 1347 aa17.34■□□□□ 0.37
HDAC7-226ENST00000547259 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.37
HDAC7-226ENST00000547259 EP400Q96L91 3159 aa17.33■□□□□ 0.37
HDAC7-226ENST00000547259 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
HDAC7-226ENST00000547259 XPCQ01831 940 aaPredicted RBP17.33■□□□□ 0.36
HDAC7-226ENST00000547259 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
HDAC7-226ENST00000547259 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
HDAC7-226ENST00000547259 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
HDAC7-226ENST00000547259 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
HDAC7-226ENST00000547259 SRCAPQ6ZRS2 3230 aa17.31■□□□□ 0.36
HDAC7-226ENST00000547259 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
HDAC7-226ENST00000547259 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
HDAC7-226ENST00000547259 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
HDAC7-226ENST00000547259 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
HDAC7-226ENST00000547259 STAC3Q96MF2 364 aa17.28■□□□□ 0.36
HDAC7-226ENST00000547259 POGKQ9P215 609 aa17.28■□□□□ 0.36
HDAC7-226ENST00000547259 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
HDAC7-226ENST00000547259 RGPD8O14715 1765 aaPredicted RBP17.28■□□□□ 0.36
HDAC7-226ENST00000547259 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
HDAC7-226ENST00000547259 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
HDAC7-226ENST00000547259 SLIT2O94813 1529 aa17.27■□□□□ 0.36
HDAC7-226ENST00000547259 NRXN1Q9ULB1 1477 aa17.27■□□□□ 0.36
HDAC7-226ENST00000547259 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.35
HDAC7-226ENST00000547259 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
HDAC7-226ENST00000547259 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
HDAC7-226ENST00000547259 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
HDAC7-226ENST00000547259 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
HDAC7-226ENST00000547259 ANKARQ7Z5J8 1434 aa17.25■□□□□ 0.35
HDAC7-226ENST00000547259 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
HDAC7-226ENST00000547259 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
HDAC7-226ENST00000547259 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
HDAC7-226ENST00000547259 VPS72Q15906 364 aa17.24■□□□□ 0.35
HDAC7-226ENST00000547259 DLC1Q96QB1 1528 aa17.24■□□□□ 0.35
HDAC7-226ENST00000547259 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
HDAC7-226ENST00000547259 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
HDAC7-226ENST00000547259 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-226ENST00000547259 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
HDAC7-226ENST00000547259 KIAA1210Q9ULL0 1709 aa17.22■□□□□ 0.35
HDAC7-226ENST00000547259 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
HDAC7-226ENST00000547259 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
HDAC7-226ENST00000547259 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
HDAC7-226ENST00000547259 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
HDAC7-226ENST00000547259 GLI3P10071 1580 aa17.2■□□□□ 0.34
HDAC7-226ENST00000547259 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDAC7-226ENST00000547259 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
HDAC7-226ENST00000547259 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
HDAC7-226ENST00000547259 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
HDAC7-226ENST00000547259 BRWD3Q6RI45 1802 aa17.18■□□□□ 0.34
HDAC7-226ENST00000547259 PLCH1Q4KWH8 1693 aa17.17■□□□□ 0.34
HDAC7-226ENST00000547259 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
HDAC7-226ENST00000547259 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
HDAC7-226ENST00000547259 TRAK1Q9UPV9 953 aa17.16■□□□□ 0.34
HDAC7-226ENST00000547259 ABCA3Q99758 1704 aa17.15■□□□□ 0.34
HDAC7-226ENST00000547259 FAM83GA6ND36 823 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms