RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 RGPD8O14715 1765 aaPredicted RBP15.24■□□□□ 0.03
BEST3-208ENST00000547208 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
BEST3-208ENST00000547208 YTHDC2Q9H6S0 1430 aaKnown RBP15.23■□□□□ 0.03
BEST3-208ENST00000547208 SPATA31A6Q5VVP1 1343 aa15.22■□□□□ 0.03
BEST3-208ENST00000547208 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
BEST3-208ENST00000547208 C14orf93Q9H972 538 aaKnown RBP15.22■□□□□ 0.03
BEST3-208ENST00000547208 ADGRB1O14514 1584 aa15.22■□□□□ 0.03
BEST3-208ENST00000547208 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
BEST3-208ENST00000547208 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
BEST3-208ENST00000547208 DDX17Q92841 729 aaKnown RBP15.2■□□□□ 0.02
BEST3-208ENST00000547208 STK26Q9P289 416 aa15.2■□□□□ 0.02
BEST3-208ENST00000547208 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
BEST3-208ENST00000547208 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
BEST3-208ENST00000547208 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
BEST3-208ENST00000547208 ORAI2Q96SN7 254 aa15.19■□□□□ 0.02
BEST3-208ENST00000547208 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
BEST3-208ENST00000547208 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
BEST3-208ENST00000547208 CFAP70Q5T0N1 1121 aa15.18■□□□□ 0.02
BEST3-208ENST00000547208 KIF1AQ12756 1690 aa15.17■□□□□ 0.02
BEST3-208ENST00000547208 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
BEST3-208ENST00000547208 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
BEST3-208ENST00000547208 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
BEST3-208ENST00000547208 ARHGEF28Q8N1W1 1705 aaKnown RBP15.16■□□□□ 0.02
BEST3-208ENST00000547208 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
BEST3-208ENST00000547208 ADGRB2O60241 1585 aa15.15■□□□□ 0.02
BEST3-208ENST00000547208 PXDNQ92626 1479 aa15.15■□□□□ 0.02
BEST3-208ENST00000547208 MARF1Q9Y4F3 1742 aaKnown RBP15.15■□□□□ 0.02
BEST3-208ENST00000547208 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
BEST3-208ENST00000547208 MEX3CQ5U5Q3 659 aaKnown RBP15.15■□□□□ 0.02
BEST3-208ENST00000547208 LRRC59Q96AG4 307 aaKnown RBP15.15■□□□□ 0.02
BEST3-208ENST00000547208 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
BEST3-208ENST00000547208 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
BEST3-208ENST00000547208 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
BEST3-208ENST00000547208 RXRBP28702 533 aa15.11■□□□□ 0.01
BEST3-208ENST00000547208 AFF2P51816 1311 aa15.11■□□□□ 0.01
BEST3-208ENST00000547208 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
BEST3-208ENST00000547208 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
BEST3-208ENST00000547208 KDM2AQ9Y2K7 1162 aa15.1■□□□□ 0.01
BEST3-208ENST00000547208 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
BEST3-208ENST00000547208 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
BEST3-208ENST00000547208 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
BEST3-208ENST00000547208 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
BEST3-208ENST00000547208 NPHP3Q7Z494 1330 aa15.09■□□□□ 0.01
BEST3-208ENST00000547208 RGS12O14924 1447 aa15.09■□□□□ 0.01
BEST3-208ENST00000547208 ABCA3Q99758 1704 aa15.07■□□□□ 0
BEST3-208ENST00000547208 FOXO3O43524 673 aa15.07■□□□□ 0
BEST3-208ENST00000547208 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
BEST3-208ENST00000547208 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
BEST3-208ENST00000547208 SAFB2Q14151 953 aaKnown RBP eCLIP15.05■□□□□ -0
BEST3-208ENST00000547208 C8orf37Q96NL8 207 aa15.05■□□□□ -0
BEST3-208ENST00000547208 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
BEST3-208ENST00000547208 ITSN1Q15811 1721 aa15.05■□□□□ -0
BEST3-208ENST00000547208 ANKARQ7Z5J8 1434 aa15.04■□□□□ -0
BEST3-208ENST00000547208 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
BEST3-208ENST00000547208 QTRT2Q9H974 415 aaKnown RBP15.03■□□□□ -0
BEST3-208ENST00000547208 POGKQ9P215 609 aa15.03■□□□□ -0
BEST3-208ENST00000547208 CDK12Q9NYV4 1490 aaPredicted RBP15.02■□□□□ -0
BEST3-208ENST00000547208 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
BEST3-208ENST00000547208 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.02□□□□□ -0.01
BEST3-208ENST00000547208 TOPAZ1Q8N9V7 1692 aa15.02□□□□□ -0.01
BEST3-208ENST00000547208 ALS2Q96Q42 1657 aa15.02□□□□□ -0.01
BEST3-208ENST00000547208 SPATA31A3Q5VYP0 1347 aa15.01□□□□□ -0.01
BEST3-208ENST00000547208 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
BEST3-208ENST00000547208 KCNA4P22459 653 aa15.01□□□□□ -0.01
BEST3-208ENST00000547208 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
BEST3-208ENST00000547208 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
BEST3-208ENST00000547208 CRYBG1Q9Y4K1 1723 aa15□□□□□ -0.01
BEST3-208ENST00000547208 PRR36Q9H6K5 1346 aa15□□□□□ -0.01
BEST3-208ENST00000547208 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
BEST3-208ENST00000547208 TNS3Q68CZ2 1445 aa15□□□□□ -0.01
BEST3-208ENST00000547208 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
BEST3-208ENST00000547208 ATP7BP35670 1465 aa14.99□□□□□ -0.01
BEST3-208ENST00000547208 QRICH2Q9H0J4 1663 aa14.99□□□□□ -0.01
BEST3-208ENST00000547208 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
BEST3-208ENST00000547208 KRT28Q7Z3Y7 464 aa14.98□□□□□ -0.01
BEST3-208ENST00000547208 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
BEST3-208ENST00000547208 NBPF1Q3BBV0 1214 aa14.97□□□□□ -0.01
BEST3-208ENST00000547208 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
BEST3-208ENST00000547208 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
BEST3-208ENST00000547208 SBNO1A3KN83 1393 aa14.97□□□□□ -0.01
BEST3-208ENST00000547208 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
BEST3-208ENST00000547208 BCL9LQ86UU0 1499 aa14.96□□□□□ -0.01
BEST3-208ENST00000547208 ATRNO75882 1429 aa14.96□□□□□ -0.01
BEST3-208ENST00000547208 RBM6P78332 1123 aaKnown RBP14.96□□□□□ -0.01
BEST3-208ENST00000547208 NWD2Q9ULI1 1742 aa14.96□□□□□ -0.01
BEST3-208ENST00000547208 PMFBP1Q8TBY8 1022 aa14.95□□□□□ -0.02
BEST3-208ENST00000547208 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
BEST3-208ENST00000547208 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
BEST3-208ENST00000547208 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
BEST3-208ENST00000547208 SLIT2O94813 1529 aa14.94□□□□□ -0.02
BEST3-208ENST00000547208 PSME1Q06323 249 aa14.93□□□□□ -0.02
BEST3-208ENST00000547208 USP21Q9UK80 565 aa14.93□□□□□ -0.02
BEST3-208ENST00000547208 NRAPQ86VF7 1730 aa14.92□□□□□ -0.02
BEST3-208ENST00000547208 EP400Q96L91 3159 aa14.92□□□□□ -0.02
BEST3-208ENST00000547208 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
BEST3-208ENST00000547208 GLI3P10071 1580 aa14.91□□□□□ -0.02
BEST3-208ENST00000547208 PHRF1Q9P1Y6 1649 aaKnown RBP14.91□□□□□ -0.02
BEST3-208ENST00000547208 BRWD3Q6RI45 1802 aa14.9□□□□□ -0.02
BEST3-208ENST00000547208 CABLES1Q8TDN4 633 aa14.9□□□□□ -0.02
BEST3-208ENST00000547208 TRPC5Q9UL62 973 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms