RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PUS7Q96PZ0 661 aaKnown RBP22.01■■□□□ 1.11
TRAFD1-203ENST00000547063 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
TRAFD1-203ENST00000547063 KIF7Q2M1P5 1343 aa22■■□□□ 1.11
TRAFD1-203ENST00000547063 DISP3Q9P2K9 1392 aa21.99■■□□□ 1.11
TRAFD1-203ENST00000547063 WASHC2AQ641Q2 1341 aa21.99■■□□□ 1.11
TRAFD1-203ENST00000547063 MINK1Q8N4C8 1332 aaPredicted RBP21.99■■□□□ 1.11
TRAFD1-203ENST00000547063 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
TRAFD1-203ENST00000547063 ADGRB2O60241 1585 aa21.98■■□□□ 1.11
TRAFD1-203ENST00000547063 PROSER2Q86WR7 435 aaPredicted RBP21.97■■□□□ 1.11
TRAFD1-203ENST00000547063 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
TRAFD1-203ENST00000547063 TULP4Q9NRJ4 1543 aa21.95■■□□□ 1.1
TRAFD1-203ENST00000547063 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
TRAFD1-203ENST00000547063 POLR3GLQ9BT43 218 aa21.94■■□□□ 1.1
TRAFD1-203ENST00000547063 STRCP1A6NGW2 1772 aa21.93■■□□□ 1.1
TRAFD1-203ENST00000547063 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
TRAFD1-203ENST00000547063 ATAD2Q6PL18 1390 aa21.92■■□□□ 1.1
TRAFD1-203ENST00000547063 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
TRAFD1-203ENST00000547063 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
TRAFD1-203ENST00000547063 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
TRAFD1-203ENST00000547063 ZNF335Q9H4Z2 1342 aaPredicted RBP21.9■■□□□ 1.1
TRAFD1-203ENST00000547063 C14orf37Q86TY3 774 aa21.9■■□□□ 1.1
TRAFD1-203ENST00000547063 NINLQ9Y2I6 1382 aa21.89■■□□□ 1.1
TRAFD1-203ENST00000547063 CDC42BPGQ6DT37 1551 aa21.88■■□□□ 1.09
TRAFD1-203ENST00000547063 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
TRAFD1-203ENST00000547063 TMEM94Q12767 1356 aa21.87■■□□□ 1.09
TRAFD1-203ENST00000547063 DDX10Q13206 875 aaKnown RBP21.87■■□□□ 1.09
TRAFD1-203ENST00000547063 CABP2Q9NPB3 220 aa21.87■■□□□ 1.09
TRAFD1-203ENST00000547063 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
TRAFD1-203ENST00000547063 DCCP43146 1447 aa21.84■■□□□ 1.09
TRAFD1-203ENST00000547063 LRRC7Q96NW7 1537 aa21.84■■□□□ 1.09
TRAFD1-203ENST00000547063 ANKARQ7Z5J8 1434 aa21.83■■□□□ 1.09
TRAFD1-203ENST00000547063 MYOM1P52179 1685 aa21.82■■□□□ 1.08
TRAFD1-203ENST00000547063 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
TRAFD1-203ENST00000547063 FMN2Q9NZ56 1722 aa21.82■■□□□ 1.08
TRAFD1-203ENST00000547063 MSH6P52701 1360 aa21.82■■□□□ 1.08
TRAFD1-203ENST00000547063 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
TRAFD1-203ENST00000547063 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
TRAFD1-203ENST00000547063 CCDC61Q9Y6R9 512 aa21.81■■□□□ 1.08
TRAFD1-203ENST00000547063 ATP7BP35670 1465 aa21.8■■□□□ 1.08
TRAFD1-203ENST00000547063 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
TRAFD1-203ENST00000547063 ITSN1Q15811 1721 aa21.8■■□□□ 1.08
TRAFD1-203ENST00000547063 ATF3P18847 181 aa21.79■■□□□ 1.08
TRAFD1-203ENST00000547063 CADPS2Q86UW7 1296 aa21.79■■□□□ 1.08
TRAFD1-203ENST00000547063 XIRP1Q702N8 1843 aaKnown RBP21.78■■□□□ 1.08
TRAFD1-203ENST00000547063 TERF2IPQ9NYB0 399 aa21.78■■□□□ 1.08
TRAFD1-203ENST00000547063 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.07
TRAFD1-203ENST00000547063 PPIP5K1Q6PFW1 1433 aa21.76■■□□□ 1.07
TRAFD1-203ENST00000547063 SLC12A5Q9H2X9 1139 aa21.76■■□□□ 1.07
TRAFD1-203ENST00000547063 PANK3Q9H999 370 aa21.76■■□□□ 1.07
TRAFD1-203ENST00000547063 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
TRAFD1-203ENST00000547063 ANKRD36BQ8N2N9 1353 aa21.75■■□□□ 1.07
TRAFD1-203ENST00000547063 HDGFL2Q7Z4V5 671 aaPredicted RBP21.75■■□□□ 1.07
TRAFD1-203ENST00000547063 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
TRAFD1-203ENST00000547063 USP32Q8NFA0 1604 aa21.74■■□□□ 1.07
TRAFD1-203ENST00000547063 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
TRAFD1-203ENST00000547063 PLEKHG3A1L390 1219 aa21.73■■□□□ 1.07
TRAFD1-203ENST00000547063 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
TRAFD1-203ENST00000547063 ZNF692Q9BU19 519 aaPredicted RBP21.71■■□□□ 1.07
TRAFD1-203ENST00000547063 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
TRAFD1-203ENST00000547063 RGPD8O14715 1765 aaPredicted RBP21.7■■□□□ 1.06
TRAFD1-203ENST00000547063 A0A1W2PP64 1363 aa21.68■■□□□ 1.06
TRAFD1-203ENST00000547063 MST1RQ04912 1400 aa21.68■■□□□ 1.06
TRAFD1-203ENST00000547063 CPSF1Q10570 1443 aaKnown RBP21.68■■□□□ 1.06
TRAFD1-203ENST00000547063 C1orf167Q5SNV9 1468 aa21.68■■□□□ 1.06
TRAFD1-203ENST00000547063 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
TRAFD1-203ENST00000547063 CD163L1Q9NR16 1453 aa21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 POLR3AO14802 1390 aaPredicted RBP21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 ESCO1Q5FWF5 840 aa21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 PHF8Q9UPP1 1060 aa21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 AKAP12Q02952 1782 aa21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 KIF1AQ12756 1690 aa21.66■■□□□ 1.06
TRAFD1-203ENST00000547063 KTN1Q86UP2 1357 aaKnown RBP21.65■■□□□ 1.06
TRAFD1-203ENST00000547063 ACEP12821 1306 aa21.65■■□□□ 1.06
TRAFD1-203ENST00000547063 ANP32CO43423 234 aa21.65■■□□□ 1.06
TRAFD1-203ENST00000547063 NSD3Q9BZ95 1437 aa21.64■■□□□ 1.06
TRAFD1-203ENST00000547063 NPC1L1Q9UHC9 1359 aa21.64■■□□□ 1.06
TRAFD1-203ENST00000547063 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
TRAFD1-203ENST00000547063 EDC4Q6P2E9 1401 aaKnown RBP21.63■■□□□ 1.05
TRAFD1-203ENST00000547063 BRD4O60885 1362 aaPredicted RBP21.63■■□□□ 1.05
TRAFD1-203ENST00000547063 CGNL1Q0VF96 1302 aa21.63■■□□□ 1.05
TRAFD1-203ENST00000547063 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
TRAFD1-203ENST00000547063 SLAIN2Q9P270 581 aa21.63■■□□□ 1.05
TRAFD1-203ENST00000547063 MON2Q7Z3U7 1717 aa21.63■■□□□ 1.05
TRAFD1-203ENST00000547063 PMFBP1Q8TBY8 1022 aa21.62■■□□□ 1.05
TRAFD1-203ENST00000547063 USP6P35125 1406 aa21.6■■□□□ 1.05
TRAFD1-203ENST00000547063 NSD2O96028 1365 aa21.6■■□□□ 1.05
TRAFD1-203ENST00000547063 ORAI2Q96SN7 254 aa21.59■■□□□ 1.05
TRAFD1-203ENST00000547063 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.05
TRAFD1-203ENST00000547063 RALBP1Q15311 655 aa21.57■■□□□ 1.04
TRAFD1-203ENST00000547063 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
TRAFD1-203ENST00000547063 PSME1Q06323 249 aa21.56■■□□□ 1.04
TRAFD1-203ENST00000547063 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
TRAFD1-203ENST00000547063 TOM1O60784 492 aa21.55■■□□□ 1.04
TRAFD1-203ENST00000547063 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
TRAFD1-203ENST00000547063 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
TRAFD1-203ENST00000547063 KIF20BQ96Q89 1820 aa21.54■■□□□ 1.04
TRAFD1-203ENST00000547063 TTC21BQ7Z4L5 1316 aa21.54■■□□□ 1.04
TRAFD1-203ENST00000547063 FOXO3O43524 673 aa21.53■■□□□ 1.04
TRAFD1-203ENST00000547063 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms