RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, human

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-208	ENST00000547061	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	HSPA2	P54652	639 aa		10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	PLCB2	Q00722	1185 aa		10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	MFSD10	Q14728	455 aa		10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	PCDH10	Q9P2E7	1040 aa		10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	PLA2R1	Q13018	1463 aa		10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	PREX1	Q8TCU6	1659 aa		10.08	□□□□□ -0.8
RACGAP1-208	ENST00000547061	IQSEC2	Q5JU85	1478 aa		10.07	□□□□□ -0.8
RACGAP1-208	ENST00000547061	GPR153	Q6NV75	609 aa		10.07	□□□□□ -0.8
RACGAP1-208	ENST00000547061	CERK	Q8TCT0	537 aa		10.07	□□□□□ -0.8
RACGAP1-208	ENST00000547061	ADGB	Q8N7X0	1667 aa		10.06	□□□□□ -0.8
RACGAP1-208	ENST00000547061	CAMSAP2	Q08AD1	1489 aa		10.06	□□□□□ -0.8
RACGAP1-208	ENST00000547061	NUDT7	P0C024	238 aa		10.06	□□□□□ -0.8
RACGAP1-208	ENST00000547061	PTCD2	Q8WV60	388 aa	Known RBP	10.06	□□□□□ -0.8
RACGAP1-208	ENST00000547061	NCOA1	Q15788	1441 aa		10.06	□□□□□ -0.8
RACGAP1-208	ENST00000547061	MAST1	Q9Y2H9	1570 aa		10.05	□□□□□ -0.8
RACGAP1-208	ENST00000547061	KANK4	Q5T7N3	995 aa	Predicted RBP	10.05	□□□□□ -0.8
RACGAP1-208	ENST00000547061	GGT6	Q6P531	493 aa		10.05	□□□□□ -0.8
RACGAP1-208	ENST00000547061	KIF3B	O15066	747 aa		10.04	□□□□□ -0.8
RACGAP1-208	ENST00000547061	HS3ST6	Q96QI5	342 aa		10.04	□□□□□ -0.8
RACGAP1-208	ENST00000547061	WASHC2C	Q9Y4E1	1318 aa		10.04	□□□□□ -0.8
RACGAP1-208	ENST00000547061	SHANK2	Q9UPX8	1470 aa		10.04	□□□□□ -0.8
RACGAP1-208	ENST00000547061	KDM5D	Q9BY66	1539 aa		10.03	□□□□□ -0.8
RACGAP1-208	ENST00000547061	MAP3K9	P80192	1104 aa		10.03	□□□□□ -0.8
RACGAP1-208	ENST00000547061	VARS2	Q5ST30	1063 aa	Known RBP	10.03	□□□□□ -0.8
RACGAP1-208	ENST00000547061	PZP	P20742	1482 aa		10.03	□□□□□ -0.8
RACGAP1-208	ENST00000547061	TCOF1	Q13428	1488 aa	Known RBP	10.03	□□□□□ -0.8
RACGAP1-208	ENST00000547061	C3	P01024	1663 aa		10.02	□□□□□ -0.8
RACGAP1-208	ENST00000547061	ARHGAP31	Q2M1Z3	1444 aa		10.02	□□□□□ -0.81
RACGAP1-208	ENST00000547061	PSD	A5PKW4	1024 aa	Predicted RBP	10.02	□□□□□ -0.81
RACGAP1-208	ENST00000547061	CDAN1	Q8IWY9	1227 aa		10.02	□□□□□ -0.81
RACGAP1-208	ENST00000547061	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.02	□□□□□ -0.81
RACGAP1-208	ENST00000547061	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.02	□□□□□ -0.81	4e-7	■□□□□ 9.9
RACGAP1-208	ENST00000547061	NLRP1	Q9C000	1473 aa		10.02	□□□□□ -0.81
RACGAP1-208	ENST00000547061	HAP1	P54257	671 aa	Predicted RBP	10.01	□□□□□ -0.81
RACGAP1-208	ENST00000547061	OXER1	Q8TDS5	423 aa		10.01	□□□□□ -0.81
RACGAP1-208	ENST00000547061	A2ML1	A8K2U0	1454 aa		10.01	□□□□□ -0.81
RACGAP1-208	ENST00000547061	ERBIN	Q96RT1	1412 aa		10	□□□□□ -0.81
RACGAP1-208	ENST00000547061	TSHZ2	Q9NRE2	1034 aa		10	□□□□□ -0.81
RACGAP1-208	ENST00000547061	DUOX2	Q9NRD8	1548 aa		9.99	□□□□□ -0.81
RACGAP1-208	ENST00000547061	TNR	Q92752	1358 aa		9.99	□□□□□ -0.81
RACGAP1-208	ENST00000547061	ABCC5	O15440	1437 aa		9.99	□□□□□ -0.81
RACGAP1-208	ENST00000547061	STRC	Q7RTU9	1775 aa		9.98	□□□□□ -0.81
RACGAP1-208	ENST00000547061	EIF2AK4	Q9P2K8	1649 aa	Known RBP	9.98	□□□□□ -0.81
RACGAP1-208	ENST00000547061	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
RACGAP1-208	ENST00000547061	FGD6	Q6ZV73	1430 aa		9.98	□□□□□ -0.81
RACGAP1-208	ENST00000547061	MED14	O60244	1454 aa		9.98	□□□□□ -0.81
RACGAP1-208	ENST00000547061	E2F4	Q16254	413 aa		9.97	□□□□□ -0.81
RACGAP1-208	ENST00000547061	ANKLE2	Q86XL3	938 aa		9.97	□□□□□ -0.81
RACGAP1-208	ENST00000547061	LHX6	Q9UPM6	363 aa		9.97	□□□□□ -0.81
RACGAP1-208	ENST00000547061	ANKRD30A	Q9BXX3	1397 aa		9.97	□□□□□ -0.81
RACGAP1-208	ENST00000547061	RNF17	Q9BXT8	1623 aa	Known RBP	9.96	□□□□□ -0.81
RACGAP1-208	ENST00000547061	ZNF142	P52746	1687 aa	Predicted RBP	9.96	□□□□□ -0.81
RACGAP1-208	ENST00000547061	PPP4R3B	Q5MIZ7	849 aa		9.96	□□□□□ -0.82
RACGAP1-208	ENST00000547061	KIF15	Q9NS87	1388 aa		9.96	□□□□□ -0.82
RACGAP1-208	ENST00000547061	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	9.96	□□□□□ -0.82
RACGAP1-208	ENST00000547061	CAMSAP1	Q5T5Y3	1602 aa		9.95	□□□□□ -0.82
RACGAP1-208	ENST00000547061	LTBP4	Q8N2S1	1624 aa		9.95	□□□□□ -0.82
RACGAP1-208	ENST00000547061	SPATA31D1	Q6ZQQ2	1576 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ABCC3	O15438	1527 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	LMTK2	Q8IWU2	1503 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ADGRL2	O95490	1459 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	DAPK1	P53355	1430 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	EVI5	O60447	810 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	CAMK2B	Q13554	666 aa		9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	FBXO31	Q5XUX0	539 aa	Predicted RBP	9.94	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ZC3H13	Q5T200	1668 aa	Known RBP	9.93	□□□□□ -0.82
RACGAP1-208	ENST00000547061	KANK1	Q14678	1352 aa		9.93	□□□□□ -0.82
RACGAP1-208	ENST00000547061	EMILIN3	Q9NT22	766 aa		9.93	□□□□□ -0.82
RACGAP1-208	ENST00000547061	SLC52A1	Q9NWF4	448 aa		9.93	□□□□□ -0.82
RACGAP1-208	ENST00000547061	CLTC	Q00610	1675 aa	Known RBP	9.93	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ROCK1	Q13464	1354 aa		9.92	□□□□□ -0.82
RACGAP1-208	ENST00000547061	DPYSL4	O14531	572 aa		9.92	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ZNF687	Q8N1G0	1237 aa		9.92	□□□□□ -0.82
RACGAP1-208	ENST00000547061	DNMT1	P26358	1616 aa	Known RBP	9.92	□□□□□ -0.82
RACGAP1-208	ENST00000547061	MYO3A	Q8NEV4	1616 aa		9.92	□□□□□ -0.82
RACGAP1-208	ENST00000547061	PRDM15	P57071	1507 aa	Predicted RBP	9.92	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ERVK-7	P63135	1459 aa		9.91	□□□□□ -0.82
RACGAP1-208	ENST00000547061	RPRD2	Q5VT52	1461 aa	Known RBP	9.91	□□□□□ -0.82
RACGAP1-208	ENST00000547061	DEPDC5	O75140	1603 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	PTPN23	Q9H3S7	1636 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	VWDE	Q8N2E2	1590 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	PBX2	P40425	430 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	ZNF454	Q8N9F8	522 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	RRP7BP	Q9NSQ0	103 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	CPS1	P31327	1500 aa		9.9	□□□□□ -0.82
RACGAP1-208	ENST00000547061	MROH1	Q8NDA8	1641 aa		9.89	□□□□□ -0.83
RACGAP1-208	ENST00000547061	UGGT1	Q9NYU2	1555 aa		9.89	□□□□□ -0.83
RACGAP1-208	ENST00000547061	ARHGAP23	Q9P227	1491 aa		9.89	□□□□□ -0.83
RACGAP1-208	ENST00000547061	SLIT1	O75093	1534 aa		9.88	□□□□□ -0.83
RACGAP1-208	ENST00000547061	NOS1	P29475	1434 aa		9.88	□□□□□ -0.83
RACGAP1-208	ENST00000547061	POTEB3	A0JP26	581 aa		9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	SPDYE16	A6NNV3	312 aa	Predicted RBP	9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	HDGF	P51858	240 aa	Known RBP	9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	POTEB	Q6S5H4	581 aa		9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	NPHP4	O75161	1426 aa	Predicted RBP	9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	ANKRD50	Q9ULJ7	1429 aa		9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	KDM5A	P29375	1690 aa	Known RBP	9.87	□□□□□ -0.83
RACGAP1-208	ENST00000547061	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	9.86	□□□□□ -0.83

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