RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
DDX54-204ENST00000546898 KDM2AQ9Y2K7 1162 aa23.11■■□□□ 1.29
DDX54-204ENST00000546898 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
DDX54-204ENST00000546898 SHPRHQ149N8 1683 aa23.09■■□□□ 1.29
DDX54-204ENST00000546898 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
DDX54-204ENST00000546898 JCADQ9P266 1359 aa23.07■■□□□ 1.28
DDX54-204ENST00000546898 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
DDX54-204ENST00000546898 WAPLQ7Z5K2 1190 aa23.06■■□□□ 1.28
DDX54-204ENST00000546898 ADGRB2O60241 1585 aa23.04■■□□□ 1.28
DDX54-204ENST00000546898 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
DDX54-204ENST00000546898 KIF1AQ12756 1690 aa23■■□□□ 1.27
DDX54-204ENST00000546898 PRAM1Q96QH2 718 aa22.99■■□□□ 1.27
DDX54-204ENST00000546898 ORAI2Q96SN7 254 aa22.97■■□□□ 1.27
DDX54-204ENST00000546898 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
DDX54-204ENST00000546898 POGKQ9P215 609 aa22.97■■□□□ 1.27
DDX54-204ENST00000546898 SPATA31A6Q5VVP1 1343 aa22.97■■□□□ 1.27
DDX54-204ENST00000546898 RGPD8O14715 1765 aaPredicted RBP22.96■■□□□ 1.27
DDX54-204ENST00000546898 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
DDX54-204ENST00000546898 TRAK1Q9UPV9 953 aa22.96■■□□□ 1.27
DDX54-204ENST00000546898 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
DDX54-204ENST00000546898 LRRC59Q96AG4 307 aaKnown RBP22.94■■□□□ 1.26
DDX54-204ENST00000546898 TRPM1Q7Z4N2 1603 aa22.93■■□□□ 1.26
DDX54-204ENST00000546898 SOS2Q07890 1332 aaPredicted RBP22.92■■□□□ 1.26
DDX54-204ENST00000546898 SAFB2Q14151 953 aaKnown RBP eCLIP22.92■■□□□ 1.26
DDX54-204ENST00000546898 ESCO1Q5FWF5 840 aa22.92■■□□□ 1.26
DDX54-204ENST00000546898 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
DDX54-204ENST00000546898 NPHP3Q7Z494 1330 aa22.91■■□□□ 1.26
DDX54-204ENST00000546898 LRP6O75581 1613 aa22.91■■□□□ 1.26
DDX54-204ENST00000546898 USP32Q8NFA0 1604 aa22.91■■□□□ 1.26
DDX54-204ENST00000546898 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
DDX54-204ENST00000546898 DDX17Q92841 729 aaKnown RBP22.91■■□□□ 1.26
DDX54-204ENST00000546898 EIF3AQ14152 1382 aaKnown RBP22.9■■□□□ 1.26
DDX54-204ENST00000546898 PXDNQ92626 1479 aa22.9■■□□□ 1.26
DDX54-204ENST00000546898 COL22A1Q8NFW1 1626 aaPredicted RBP22.89■■□□□ 1.25
DDX54-204ENST00000546898 PNPLA6Q8IY17 1366 aa22.89■■□□□ 1.25
DDX54-204ENST00000546898 TULP4Q9NRJ4 1543 aa22.88■■□□□ 1.25
DDX54-204ENST00000546898 NUTM2FA1L443 756 aa22.88■■□□□ 1.25
DDX54-204ENST00000546898 ITSN1Q15811 1721 aa22.88■■□□□ 1.25
DDX54-204ENST00000546898 MINK1Q8N4C8 1332 aaPredicted RBP22.85■■□□□ 1.25
DDX54-204ENST00000546898 NBPF1Q3BBV0 1214 aa22.85■■□□□ 1.25
DDX54-204ENST00000546898 HIRIP3Q9BW71 556 aaPredicted RBP22.83■■□□□ 1.25
DDX54-204ENST00000546898 TONSLQ96HA7 1378 aa22.83■■□□□ 1.25
DDX54-204ENST00000546898 QRICH2Q9H0J4 1663 aa22.83■■□□□ 1.24
DDX54-204ENST00000546898 WASLO00401 505 aaPredicted RBP22.82■■□□□ 1.24
DDX54-204ENST00000546898 FOXO3O43524 673 aa22.82■■□□□ 1.24
DDX54-204ENST00000546898 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
DDX54-204ENST00000546898 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
DDX54-204ENST00000546898 PHF8Q9UPP1 1060 aa22.81■■□□□ 1.24
DDX54-204ENST00000546898 TOPAZ1Q8N9V7 1692 aa22.79■■□□□ 1.24
DDX54-204ENST00000546898 ATP7BP35670 1465 aa22.79■■□□□ 1.24
DDX54-204ENST00000546898 ROCK2O75116 1388 aaKnown RBP22.78■■□□□ 1.24
DDX54-204ENST00000546898 MARF1Q9Y4F3 1742 aaKnown RBP22.77■■□□□ 1.24
DDX54-204ENST00000546898 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
DDX54-204ENST00000546898 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
DDX54-204ENST00000546898 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
DDX54-204ENST00000546898 CENPJQ9HC77 1338 aaPredicted RBP22.77■■□□□ 1.24
DDX54-204ENST00000546898 PRR36Q9H6K5 1346 aa22.76■■□□□ 1.23
DDX54-204ENST00000546898 GPRASP1Q5JY77 1395 aa22.76■■□□□ 1.23
DDX54-204ENST00000546898 TRPM3Q9HCF6 1732 aaPredicted RBP22.75■■□□□ 1.23
DDX54-204ENST00000546898 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
DDX54-204ENST00000546898 TNS3Q68CZ2 1445 aa22.74■■□□□ 1.23
DDX54-204ENST00000546898 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
DDX54-204ENST00000546898 KRT28Q7Z3Y7 464 aa22.74■■□□□ 1.23
DDX54-204ENST00000546898 PSME1Q06323 249 aa22.73■■□□□ 1.23
DDX54-204ENST00000546898 SPATA31A3Q5VYP0 1347 aa22.73■■□□□ 1.23
DDX54-204ENST00000546898 SBNO1A3KN83 1393 aa22.73■■□□□ 1.23
DDX54-204ENST00000546898 NBPF8Q3BBV2 869 aa22.72■■□□□ 1.23
DDX54-204ENST00000546898 ZNF772Q68DY9 489 aaPredicted RBP22.72■■□□□ 1.23
DDX54-204ENST00000546898 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
DDX54-204ENST00000546898 CDK19Q9BWU1 502 aa22.71■■□□□ 1.23
DDX54-204ENST00000546898 ALS2Q96Q42 1657 aa22.71■■□□□ 1.23
DDX54-204ENST00000546898 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
DDX54-204ENST00000546898 POTEAQ6S8J7 498 aa22.7■■□□□ 1.22
DDX54-204ENST00000546898 NUDT16Q96DE0 195 aaKnown RBP22.7■■□□□ 1.22
DDX54-204ENST00000546898 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
DDX54-204ENST00000546898 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
DDX54-204ENST00000546898 ARHGEF10O15013 1369 aa22.68■■□□□ 1.22
DDX54-204ENST00000546898 AFF2P51816 1311 aa22.66■■□□□ 1.22
DDX54-204ENST00000546898 C8orf37Q96NL8 207 aa22.66■■□□□ 1.22
DDX54-204ENST00000546898 ADAMTS2O95450 1211 aa22.65■■□□□ 1.22
DDX54-204ENST00000546898 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
DDX54-204ENST00000546898 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.21
DDX54-204ENST00000546898 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
DDX54-204ENST00000546898 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
DDX54-204ENST00000546898 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
DDX54-204ENST00000546898 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
DDX54-204ENST00000546898 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
DDX54-204ENST00000546898 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.62■■□□□ 1.21
DDX54-204ENST00000546898 EVC2Q86UK5 1308 aa22.61■■□□□ 1.21
DDX54-204ENST00000546898 PPIP5K1Q6PFW1 1433 aa22.61■■□□□ 1.21
DDX54-204ENST00000546898 NGLY1Q96IV0 654 aa22.61■■□□□ 1.21
DDX54-204ENST00000546898 PLEKHG3A1L390 1219 aa22.6■■□□□ 1.21
DDX54-204ENST00000546898 TIMELESSQ9UNS1 1208 aa22.59■■□□□ 1.21
DDX54-204ENST00000546898 LMOD2Q6P5Q4 547 aa22.58■■□□□ 1.21
DDX54-204ENST00000546898 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
DDX54-204ENST00000546898 CABP2Q9NPB3 220 aa22.58■■□□□ 1.21
DDX54-204ENST00000546898 CDK12Q9NYV4 1490 aaPredicted RBP22.58■■□□□ 1.2
DDX54-204ENST00000546898 ACEP12821 1306 aa22.57■■□□□ 1.2
DDX54-204ENST00000546898 PLCH1Q4KWH8 1693 aa22.57■■□□□ 1.2
DDX54-204ENST00000546898 NWD2Q9ULI1 1742 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms