RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PTPRKQ15262 1439 aa15.57■□□□□ 0.08
PTCH1-212ENST00000546744 HDGFP51858 240 aaKnown RBP15.57■□□□□ 0.08
PTCH1-212ENST00000546744 TSR1Q2NL82 804 aaKnown RBP15.57■□□□□ 0.08
PTCH1-212ENST00000546744 ANKRD50Q9ULJ7 1429 aa15.57■□□□□ 0.08
PTCH1-212ENST00000546744 ERCC4Q92889 916 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-212ENST00000546744 MNS1Q8NEH6 495 aa15.57■□□□□ 0.08
PTCH1-212ENST00000546744 FAM184AQ8NB25 1140 aa15.56■□□□□ 0.08
PTCH1-212ENST00000546744 C9orf84Q5VXU9 1444 aa15.56■□□□□ 0.08
PTCH1-212ENST00000546744 PANK3Q9H999 370 aa15.56■□□□□ 0.08
PTCH1-212ENST00000546744 MCM4P33991 863 aa15.55■□□□□ 0.08
PTCH1-212ENST00000546744 CDR1P51861 262 aa15.55■□□□□ 0.08
PTCH1-212ENST00000546744 RABEP1Q15276 862 aa15.55■□□□□ 0.08
PTCH1-212ENST00000546744 C11orf95C9JLR9 678 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-212ENST00000546744 CCDC144AA2RUR9 1427 aa15.54■□□□□ 0.08
PTCH1-212ENST00000546744 PDIA4P13667 645 aaKnown RBP15.54■□□□□ 0.08
PTCH1-212ENST00000546744 APBB1O00213 710 aa15.54■□□□□ 0.08
PTCH1-212ENST00000546744 MSH5O43196 834 aa15.54■□□□□ 0.08
PTCH1-212ENST00000546744 IFT57Q9NWB7 429 aa15.54■□□□□ 0.08
PTCH1-212ENST00000546744 CDC45O75419 566 aa15.53■□□□□ 0.08
PTCH1-212ENST00000546744 MCM5P33992 734 aa15.53■□□□□ 0.08
PTCH1-212ENST00000546744 TCOF1Q13428 1488 aaKnown RBP15.53■□□□□ 0.08
PTCH1-212ENST00000546744 ZKSCAN1P17029 563 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-212ENST00000546744 SASS6Q6UVJ0 657 aa15.53■□□□□ 0.08
PTCH1-212ENST00000546744 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
PTCH1-212ENST00000546744 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
PTCH1-212ENST00000546744 MCTP1Q6DN14 999 aa15.53■□□□□ 0.08
PTCH1-212ENST00000546744 H3BQV1 296 aa15.52■□□□□ 0.08
PTCH1-212ENST00000546744 IFFO2Q5TF58 517 aa15.52■□□□□ 0.08
PTCH1-212ENST00000546744 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
PTCH1-212ENST00000546744 ZNF592Q92610 1267 aa15.52■□□□□ 0.08
PTCH1-212ENST00000546744 ABCA8O94911 1581 aa15.52■□□□□ 0.08
PTCH1-212ENST00000546744 PLEKHH2Q8IVE3 1493 aa15.52■□□□□ 0.08
PTCH1-212ENST00000546744 CCDC146Q8IYE0 955 aa15.52■□□□□ 0.07
PTCH1-212ENST00000546744 TSPY26PQ9H489 355 aa15.52■□□□□ 0.07
PTCH1-212ENST00000546744 HOOK1Q9UJC3 728 aaKnown RBP15.52■□□□□ 0.07
PTCH1-212ENST00000546744 ITSN2Q9NZM3 1697 aa15.52■□□□□ 0.07
PTCH1-212ENST00000546744 USP8P40818 1118 aa15.51■□□□□ 0.07
PTCH1-212ENST00000546744 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
PTCH1-212ENST00000546744 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
PTCH1-212ENST00000546744 AK7Q96M32 723 aa15.51■□□□□ 0.07
PTCH1-212ENST00000546744 NAT10Q9H0A0 1025 aaKnown RBP15.51■□□□□ 0.07
PTCH1-212ENST00000546744 KIF3BO15066 747 aa15.51■□□□□ 0.07
PTCH1-212ENST00000546744 HSP90B1P14625 803 aaKnown RBP15.51■□□□□ 0.07
PTCH1-212ENST00000546744 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
PTCH1-212ENST00000546744 APPP05067 770 aa15.5■□□□□ 0.07
PTCH1-212ENST00000546744 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-212ENST00000546744 APAF1O14727 1248 aa15.5■□□□□ 0.07
PTCH1-212ENST00000546744 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
PTCH1-212ENST00000546744 CPLX2Q6PUV4 134 aaKnown RBP15.49■□□□□ 0.07
PTCH1-212ENST00000546744 UQCRHLA0A096LP55 91 aa15.48■□□□□ 0.07
PTCH1-212ENST00000546744 UQCRHP07919 91 aa15.48■□□□□ 0.07
PTCH1-212ENST00000546744 RUNDC1Q96C34 613 aa15.48■□□□□ 0.07
PTCH1-212ENST00000546744 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.48■□□□□ 0.07
PTCH1-212ENST00000546744 CCDC141Q6ZP82 1450 aa15.48■□□□□ 0.07
PTCH1-212ENST00000546744 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
PTCH1-212ENST00000546744 LEKR1Q6ZMV7 388 aa15.48■□□□□ 0.07
PTCH1-212ENST00000546744 GGT6Q6P531 493 aa15.47■□□□□ 0.07
PTCH1-212ENST00000546744 C14orf37Q86TY3 774 aa15.47■□□□□ 0.07
PTCH1-212ENST00000546744 SMC3Q9UQE7 1217 aa15.47■□□□□ 0.07
PTCH1-212ENST00000546744 NCOA1Q15788 1441 aa15.47■□□□□ 0.07
PTCH1-212ENST00000546744 PDCP20941 246 aa15.47■□□□□ 0.07
PTCH1-212ENST00000546744 CCAR2Q8N163 923 aaKnown RBP15.47■□□□□ 0.07
PTCH1-212ENST00000546744 KIF2AO00139 706 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-212ENST00000546744 CCDC73Q6ZRK6 1079 aa15.46■□□□□ 0.07
PTCH1-212ENST00000546744 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
PTCH1-212ENST00000546744 CLCN1P35523 988 aa15.45■□□□□ 0.06
PTCH1-212ENST00000546744 RDXP35241 583 aaKnown RBP15.45■□□□□ 0.06
PTCH1-212ENST00000546744 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
PTCH1-212ENST00000546744 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
PTCH1-212ENST00000546744 BICD2Q8TD16 824 aa15.45■□□□□ 0.06
PTCH1-212ENST00000546744 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
PTCH1-212ENST00000546744 DCTN1Q14203 1278 aa15.43■□□□□ 0.06
PTCH1-212ENST00000546744 RUFY1Q96T51 708 aa15.43■□□□□ 0.06
PTCH1-212ENST00000546744 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
PTCH1-212ENST00000546744 TPD52L1Q16890 204 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-212ENST00000546744 HSP90AB4PQ58FF6 505 aa15.43■□□□□ 0.06
PTCH1-212ENST00000546744 FOXD4L5Q5VV16 416 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-212ENST00000546744 PNISRQ8TF01 805 aaKnown RBP15.43■□□□□ 0.06
PTCH1-212ENST00000546744 FOXD4L4Q8WXT5 416 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-212ENST00000546744 CALCOCO1Q9P1Z2 691 aa15.43■□□□□ 0.06
PTCH1-212ENST00000546744 NOL8Q76FK4 1167 aaKnown RBP15.43■□□□□ 0.06
PTCH1-212ENST00000546744 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
PTCH1-212ENST00000546744 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
PTCH1-212ENST00000546744 K7ELQ4 463 aaPredicted RBP15.42■□□□□ 0.06
PTCH1-212ENST00000546744 RBM10P98175 930 aaKnown RBP15.41■□□□□ 0.06
PTCH1-212ENST00000546744 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
PTCH1-212ENST00000546744 PLCH2O75038 1416 aa15.41■□□□□ 0.06
PTCH1-212ENST00000546744 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
PTCH1-212ENST00000546744 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
PTCH1-212ENST00000546744 WDR7Q9Y4E6 1490 aa15.4■□□□□ 0.06
PTCH1-212ENST00000546744 CCDC192P0DO97 292 aa15.4■□□□□ 0.06
PTCH1-212ENST00000546744 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
PTCH1-212ENST00000546744 CCDC191Q8NCU4 936 aa15.39■□□□□ 0.05
PTCH1-212ENST00000546744 TRIM5Q9C035 493 aa15.39■□□□□ 0.05
PTCH1-212ENST00000546744 WDR33Q9C0J8 1336 aaKnown RBP15.39■□□□□ 0.05
PTCH1-212ENST00000546744 MAPKBP1O60336 1514 aa15.39■□□□□ 0.05
PTCH1-212ENST00000546744 H0YHG0 523 aa15.39■□□□□ 0.05
PTCH1-212ENST00000546744 ZMYND15Q9H091 742 aa15.39■□□□□ 0.05
PTCH1-212ENST00000546744 DEF6Q9H4E7 631 aa15.39■□□□□ 0.05
PTCH1-212ENST00000546744 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms