RNA–Protein interactions for RNA: ENST00000546619.5

CALCOCO1-204, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-204ENST00000546619 CDC42BPGQ6DT37 1551 aa22.76■■□□□ 1.23
CALCOCO1-204ENST00000546619 RGL3Q3MIN7 710 aa22.75■■□□□ 1.23
CALCOCO1-204ENST00000546619 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
CALCOCO1-204ENST00000546619 STK26Q9P289 416 aa22.73■■□□□ 1.23
CALCOCO1-204ENST00000546619 NPHP3Q7Z494 1330 aa22.72■■□□□ 1.23
CALCOCO1-204ENST00000546619 ANKRD30BQ9BXX2 1392 aa22.72■■□□□ 1.23
CALCOCO1-204ENST00000546619 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
CALCOCO1-204ENST00000546619 MPHOSPH9Q99550 1183 aa22.71■■□□□ 1.23
CALCOCO1-204ENST00000546619 USP21Q9UK80 565 aa22.71■■□□□ 1.23
CALCOCO1-204ENST00000546619 TECPR2O15040 1411 aa22.7■■□□□ 1.22
CALCOCO1-204ENST00000546619 COL22A1Q8NFW1 1626 aaPredicted RBP22.69■■□□□ 1.22
CALCOCO1-204ENST00000546619 LRPPRCP42704 1394 aaKnown RBP22.69■■□□□ 1.22
CALCOCO1-204ENST00000546619 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
CALCOCO1-204ENST00000546619 PXDNQ92626 1479 aa22.68■■□□□ 1.22
CALCOCO1-204ENST00000546619 NUTM2FA1L443 756 aa22.67■■□□□ 1.22
CALCOCO1-204ENST00000546619 FOXO3O43524 673 aa22.67■■□□□ 1.22
CALCOCO1-204ENST00000546619 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
CALCOCO1-204ENST00000546619 TMEM132EQ6IEE7 984 aa22.67■■□□□ 1.22
CALCOCO1-204ENST00000546619 TRPC5Q9UL62 973 aaPredicted RBP22.67■■□□□ 1.22
CALCOCO1-204ENST00000546619 IFT172Q9UG01 1749 aa22.67■■□□□ 1.22
CALCOCO1-204ENST00000546619 MYOM2P54296 1465 aa22.66■■□□□ 1.22
CALCOCO1-204ENST00000546619 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
CALCOCO1-204ENST00000546619 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
CALCOCO1-204ENST00000546619 ABCC11Q96J66 1382 aa22.65■■□□□ 1.22
CALCOCO1-204ENST00000546619 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
CALCOCO1-204ENST00000546619 ATAD2Q6PL18 1390 aa22.63■■□□□ 1.21
CALCOCO1-204ENST00000546619 KNDC1Q76NI1 1749 aa22.62■■□□□ 1.21
CALCOCO1-204ENST00000546619 ATRNO75882 1429 aa22.62■■□□□ 1.21
CALCOCO1-204ENST00000546619 YTHDC2Q9H6S0 1430 aaKnown RBP22.62■■□□□ 1.21
CALCOCO1-204ENST00000546619 FMN2Q9NZ56 1722 aa22.58■■□□□ 1.21
CALCOCO1-204ENST00000546619 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
CALCOCO1-204ENST00000546619 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
CALCOCO1-204ENST00000546619 KIF1AQ12756 1690 aa22.55■■□□□ 1.2
CALCOCO1-204ENST00000546619 C14orf93Q9H972 538 aaKnown RBP22.55■■□□□ 1.2
CALCOCO1-204ENST00000546619 SPATA31A3Q5VYP0 1347 aa22.55■■□□□ 1.2
CALCOCO1-204ENST00000546619 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
CALCOCO1-204ENST00000546619 SIRT1Q96EB6 747 aa22.54■■□□□ 1.2
CALCOCO1-204ENST00000546619 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
CALCOCO1-204ENST00000546619 CFAP70Q5T0N1 1121 aa22.53■■□□□ 1.2
CALCOCO1-204ENST00000546619 KRT28Q7Z3Y7 464 aa22.53■■□□□ 1.2
CALCOCO1-204ENST00000546619 NRXN1Q9ULB1 1477 aa22.53■■□□□ 1.2
CALCOCO1-204ENST00000546619 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
CALCOCO1-204ENST00000546619 SAFB2Q14151 953 aaKnown RBP eCLIP22.5■■□□□ 1.19
CALCOCO1-204ENST00000546619 PHF8Q9UPP1 1060 aa22.5■■□□□ 1.19
CALCOCO1-204ENST00000546619 PRAM1Q96QH2 718 aa22.49■■□□□ 1.19
CALCOCO1-204ENST00000546619 HAP1P54257 671 aaPredicted RBP22.48■■□□□ 1.19
CALCOCO1-204ENST00000546619 PSME1Q06323 249 aa22.48■■□□□ 1.19
CALCOCO1-204ENST00000546619 UNC5CLQ8IV45 518 aa22.48■■□□□ 1.19
CALCOCO1-204ENST00000546619 TNS3Q68CZ2 1445 aa22.48■■□□□ 1.19
CALCOCO1-204ENST00000546619 SLIT2O94813 1529 aa22.47■■□□□ 1.19
CALCOCO1-204ENST00000546619 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.47■■□□□ 1.19
CALCOCO1-204ENST00000546619 EP400Q96L91 3159 aa22.46■■□□□ 1.19
CALCOCO1-204ENST00000546619 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
CALCOCO1-204ENST00000546619 RALGAPBQ86X10 1494 aa22.46■■□□□ 1.19
CALCOCO1-204ENST00000546619 PLEKHG5O94827 1062 aa22.45■■□□□ 1.18
CALCOCO1-204ENST00000546619 POGKQ9P215 609 aa22.45■■□□□ 1.18
CALCOCO1-204ENST00000546619 RAB3GAP2Q9H2M9 1393 aa22.45■■□□□ 1.18
CALCOCO1-204ENST00000546619 RGPD8O14715 1765 aaPredicted RBP22.44■■□□□ 1.18
CALCOCO1-204ENST00000546619 CABLES1Q8TDN4 633 aa22.44■■□□□ 1.18
CALCOCO1-204ENST00000546619 GLI3P10071 1580 aa22.43■■□□□ 1.18
CALCOCO1-204ENST00000546619 DLC1Q96QB1 1528 aa22.43■■□□□ 1.18
CALCOCO1-204ENST00000546619 LMOD2Q6P5Q4 547 aa22.43■■□□□ 1.18
CALCOCO1-204ENST00000546619 CCDC125Q86Z20 511 aa22.43■■□□□ 1.18
CALCOCO1-204ENST00000546619 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
CALCOCO1-204ENST00000546619 SRCAPQ6ZRS2 3230 aa22.42■■□□□ 1.18
CALCOCO1-204ENST00000546619 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
CALCOCO1-204ENST00000546619 ZRANB1Q9UGI0 708 aa22.41■■□□□ 1.18
CALCOCO1-204ENST00000546619 ANKARQ7Z5J8 1434 aa22.4■■□□□ 1.18
CALCOCO1-204ENST00000546619 PMFBP1Q8TBY8 1022 aa22.4■■□□□ 1.18
CALCOCO1-204ENST00000546619 ADGRB1O14514 1584 aa22.39■■□□□ 1.18
CALCOCO1-204ENST00000546619 ADGRB2O60241 1585 aa22.38■■□□□ 1.17
CALCOCO1-204ENST00000546619 TRAK1Q9UPV9 953 aa22.38■■□□□ 1.17
CALCOCO1-204ENST00000546619 VPS72Q15906 364 aa22.37■■□□□ 1.17
CALCOCO1-204ENST00000546619 HIRIP3Q9BW71 556 aaPredicted RBP22.37■■□□□ 1.17
CALCOCO1-204ENST00000546619 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
CALCOCO1-204ENST00000546619 CCDC9Q9Y3X0 531 aaKnown RBP22.37■■□□□ 1.17
CALCOCO1-204ENST00000546619 PLCH1Q4KWH8 1693 aa22.36■■□□□ 1.17
CALCOCO1-204ENST00000546619 ABCA3Q99758 1704 aa22.36■■□□□ 1.17
CALCOCO1-204ENST00000546619 MINK1Q8N4C8 1332 aaPredicted RBP22.35■■□□□ 1.17
CALCOCO1-204ENST00000546619 BLMP54132 1417 aaPredicted RBP22.35■■□□□ 1.17
CALCOCO1-204ENST00000546619 SEPT12Q8IYM1 358 aa22.35■■□□□ 1.17
CALCOCO1-204ENST00000546619 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
CALCOCO1-204ENST00000546619 EIF3AQ14152 1382 aaKnown RBP22.34■■□□□ 1.17
CALCOCO1-204ENST00000546619 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
CALCOCO1-204ENST00000546619 FAM83GA6ND36 823 aa22.32■■□□□ 1.16
CALCOCO1-204ENST00000546619 GPRASP1Q5JY77 1395 aa22.32■■□□□ 1.16
CALCOCO1-204ENST00000546619 BRWD3Q6RI45 1802 aa22.31■■□□□ 1.16
CALCOCO1-204ENST00000546619 TULP4Q9NRJ4 1543 aa22.31■■□□□ 1.16
CALCOCO1-204ENST00000546619 PRR36Q9H6K5 1346 aa22.31■■□□□ 1.16
CALCOCO1-204ENST00000546619 TRPM3Q9HCF6 1732 aaPredicted RBP22.29■■□□□ 1.16
CALCOCO1-204ENST00000546619 WASLO00401 505 aaPredicted RBP22.29■■□□□ 1.16
CALCOCO1-204ENST00000546619 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
CALCOCO1-204ENST00000546619 A0A0G2JS52 829 aa22.28■■□□□ 1.16
CALCOCO1-204ENST00000546619 ONECUT3O60422 494 aaPredicted RBP22.28■■□□□ 1.16
CALCOCO1-204ENST00000546619 MYT1Q01538 1121 aa22.28■■□□□ 1.16
CALCOCO1-204ENST00000546619 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
CALCOCO1-204ENST00000546619 DEFB132Q7Z7B7 95 aa22.27■■□□□ 1.16
CALCOCO1-204ENST00000546619 STAC3Q96MF2 364 aa22.27■■□□□ 1.16
CALCOCO1-204ENST00000546619 NGDNQ8NEJ9 315 aaKnown RBP22.26■■□□□ 1.15
CALCOCO1-204ENST00000546619 BTG4Q9NY30 223 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms