RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 C1orf167Q5SNV9 1468 aa29.17■■■□□ 2.26
LTBP4-206ENST00000546155 TRAK1Q9UPV9 953 aa29.16■■■□□ 2.26
LTBP4-206ENST00000546155 STAC3Q96MF2 364 aa29.15■■■□□ 2.26
LTBP4-206ENST00000546155 PRAM1Q96QH2 718 aa29.15■■■□□ 2.26
LTBP4-206ENST00000546155 POGKQ9P215 609 aa29.14■■■□□ 2.26
LTBP4-206ENST00000546155 JCADQ9P266 1359 aa29.13■■■□□ 2.25
LTBP4-206ENST00000546155 SIRT1Q96EB6 747 aa29.12■■■□□ 2.25
LTBP4-206ENST00000546155 ESCO1Q5FWF5 840 aa29.11■■■□□ 2.25
LTBP4-206ENST00000546155 AHDC1Q5TGY3 1603 aaPredicted RBP29.09■■■□□ 2.25
LTBP4-206ENST00000546155 COL16A1Q07092 1604 aaPredicted RBP29.09■■■□□ 2.25
LTBP4-206ENST00000546155 LAMC1P11047 1609 aa29.08■■■□□ 2.25
LTBP4-206ENST00000546155 L3MBTL2Q969R5 705 aa29.07■■■□□ 2.24
LTBP4-206ENST00000546155 ADGRB1O14514 1584 aa29.05■■■□□ 2.24
LTBP4-206ENST00000546155 KNDC1Q76NI1 1749 aa29.05■■■□□ 2.24
LTBP4-206ENST00000546155 NUTM2BA6NNL0 878 aaPredicted RBP29.04■■■□□ 2.24
LTBP4-206ENST00000546155 NUTM2EB1AL46 878 aaPredicted RBP29.04■■■□□ 2.24
LTBP4-206ENST00000546155 NUTM2AQ8IVF1 878 aaPredicted RBP29.04■■■□□ 2.24
LTBP4-206ENST00000546155 HIRIP3Q9BW71 556 aaPredicted RBP29.04■■■□□ 2.24
LTBP4-206ENST00000546155 LRRC59Q96AG4 307 aaKnown RBP29.03■■■□□ 2.24
LTBP4-206ENST00000546155 MINK1Q8N4C8 1332 aaPredicted RBP29.02■■■□□ 2.24
LTBP4-206ENST00000546155 CDC42BPGQ6DT37 1551 aa29.02■■■□□ 2.24
LTBP4-206ENST00000546155 NBPF1Q3BBV0 1214 aa29.02■■■□□ 2.24
LTBP4-206ENST00000546155 XPCQ01831 940 aaPredicted RBP29.01■■■□□ 2.23
LTBP4-206ENST00000546155 FOXO3O43524 673 aa29■■■□□ 2.23
LTBP4-206ENST00000546155 MEX3CQ5U5Q3 659 aaKnown RBP29■■■□□ 2.23
LTBP4-206ENST00000546155 RGS17Q9UGC6 210 aaPredicted RBP29■■■□□ 2.23
LTBP4-206ENST00000546155 SPATA31A6Q5VVP1 1343 aa28.98■■■□□ 2.23
LTBP4-206ENST00000546155 DLC1Q96QB1 1528 aa28.98■■■□□ 2.23
LTBP4-206ENST00000546155 NHSL1Q5SYE7 1610 aa28.95■■■□□ 2.23
LTBP4-206ENST00000546155 SOS2Q07890 1332 aaPredicted RBP28.94■■■□□ 2.22
LTBP4-206ENST00000546155 NPHP3Q7Z494 1330 aa28.94■■■□□ 2.22
LTBP4-206ENST00000546155 LRP6O75581 1613 aa28.93■■■□□ 2.22
LTBP4-206ENST00000546155 PNPLA6Q8IY17 1366 aa28.91■■■□□ 2.22
LTBP4-206ENST00000546155 PHF8Q9UPP1 1060 aa28.9■■■□□ 2.22
LTBP4-206ENST00000546155 POTEAQ6S8J7 498 aa28.89■■■□□ 2.22
LTBP4-206ENST00000546155 PMFBP1Q8TBY8 1022 aa28.88■■■□□ 2.21
LTBP4-206ENST00000546155 FMN2Q9NZ56 1722 aa28.88■■■□□ 2.21
LTBP4-206ENST00000546155 WASLO00401 505 aaPredicted RBP28.87■■■□□ 2.21
LTBP4-206ENST00000546155 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
LTBP4-206ENST00000546155 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
LTBP4-206ENST00000546155 SOCS7O14512 581 aa28.85■■■□□ 2.21
LTBP4-206ENST00000546155 ADAMTS2O95450 1211 aa28.85■■■□□ 2.21
LTBP4-206ENST00000546155 KRT28Q7Z3Y7 464 aa28.85■■■□□ 2.21
LTBP4-206ENST00000546155 PRR36Q9H6K5 1346 aa28.83■■■□□ 2.21
LTBP4-206ENST00000546155 NBPF8Q3BBV2 869 aa28.82■■■□□ 2.2
LTBP4-206ENST00000546155 PXDNQ92626 1479 aa28.82■■■□□ 2.2
LTBP4-206ENST00000546155 PLEKHG5O94827 1062 aa28.81■■■□□ 2.2
LTBP4-206ENST00000546155 C8orf37Q96NL8 207 aa28.81■■■□□ 2.2
LTBP4-206ENST00000546155 TONSLQ96HA7 1378 aa28.8■■■□□ 2.2
LTBP4-206ENST00000546155 PSME1Q06323 249 aa28.8■■■□□ 2.2
LTBP4-206ENST00000546155 CDK19Q9BWU1 502 aa28.8■■■□□ 2.2
LTBP4-206ENST00000546155 KIAA1210Q9ULL0 1709 aa28.79■■■□□ 2.2
LTBP4-206ENST00000546155 ANKARQ7Z5J8 1434 aa28.78■■■□□ 2.2
LTBP4-206ENST00000546155 ADGRB2O60241 1585 aa28.78■■■□□ 2.2
LTBP4-206ENST00000546155 LMOD2Q6P5Q4 547 aa28.77■■■□□ 2.2
LTBP4-206ENST00000546155 ARHGEF28Q8N1W1 1705 aaKnown RBP28.77■■■□□ 2.2
LTBP4-206ENST00000546155 ROCK2O75116 1388 aaKnown RBP28.76■■■□□ 2.2
LTBP4-206ENST00000546155 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
LTBP4-206ENST00000546155 NUDT16Q96DE0 195 aaKnown RBP28.76■■■□□ 2.19
LTBP4-206ENST00000546155 EIF3AQ14152 1382 aaKnown RBP28.75■■■□□ 2.19
LTBP4-206ENST00000546155 AFF2P51816 1311 aa28.75■■■□□ 2.19
LTBP4-206ENST00000546155 SPATA31A3Q5VYP0 1347 aa28.75■■■□□ 2.19
LTBP4-206ENST00000546155 ZNF772Q68DY9 489 aaPredicted RBP28.74■■■□□ 2.19
LTBP4-206ENST00000546155 NGLY1Q96IV0 654 aa28.74■■■□□ 2.19
LTBP4-206ENST00000546155 RGPD8O14715 1765 aaPredicted RBP28.73■■■□□ 2.19
LTBP4-206ENST00000546155 NGDNQ8NEJ9 315 aaKnown RBP28.73■■■□□ 2.19
LTBP4-206ENST00000546155 TULP4Q9NRJ4 1543 aa28.73■■■□□ 2.19
LTBP4-206ENST00000546155 USP32Q8NFA0 1604 aa28.72■■■□□ 2.19
LTBP4-206ENST00000546155 KIF1AQ12756 1690 aa28.72■■■□□ 2.19
LTBP4-206ENST00000546155 SRPK2P78362 688 aaKnown RBP28.7■■■□□ 2.18
LTBP4-206ENST00000546155 CCER1Q8TC90 406 aaPredicted RBP28.7■■■□□ 2.18
LTBP4-206ENST00000546155 CABP2Q9NPB3 220 aa28.69■■■□□ 2.18
LTBP4-206ENST00000546155 CABLES1Q8TDN4 633 aa28.68■■■□□ 2.18
LTBP4-206ENST00000546155 GPRASP1Q5JY77 1395 aa28.67■■■□□ 2.18
LTBP4-206ENST00000546155 TRPM1Q7Z4N2 1603 aa28.67■■■□□ 2.18
LTBP4-206ENST00000546155 HAP1P54257 671 aaPredicted RBP28.66■■■□□ 2.18
LTBP4-206ENST00000546155 PAK3O75914 559 aaPredicted RBP28.65■■■□□ 2.18
LTBP4-206ENST00000546155 CARD11Q9BXL7 1154 aa28.65■■■□□ 2.18
LTBP4-206ENST00000546155 TNS3Q68CZ2 1445 aa28.65■■■□□ 2.18
LTBP4-206ENST00000546155 ATP7BP35670 1465 aa28.65■■■□□ 2.18
LTBP4-206ENST00000546155 SBNO1A3KN83 1393 aa28.64■■■□□ 2.18
LTBP4-206ENST00000546155 TIMELESSQ9UNS1 1208 aa28.64■■■□□ 2.18
LTBP4-206ENST00000546155 CCDC61Q9Y6R9 512 aa28.64■■■□□ 2.18
LTBP4-206ENST00000546155 QTRT2Q9H974 415 aaKnown RBP28.63■■■□□ 2.17
LTBP4-206ENST00000546155 RXRBP28702 533 aa28.61■■■□□ 2.17
LTBP4-206ENST00000546155 USP21Q9UK80 565 aa28.61■■■□□ 2.17
LTBP4-206ENST00000546155 COL22A1Q8NFW1 1626 aaPredicted RBP28.6■■■□□ 2.17
LTBP4-206ENST00000546155 ACEP12821 1306 aa28.59■■■□□ 2.17
LTBP4-206ENST00000546155 ARHGEF10O15013 1369 aa28.57■■■□□ 2.16
LTBP4-206ENST00000546155 PLEKHG3A1L390 1219 aa28.56■■■□□ 2.16
LTBP4-206ENST00000546155 EVC2Q86UK5 1308 aa28.56■■■□□ 2.16
LTBP4-206ENST00000546155 FNBP4Q8N3X1 1017 aaPredicted RBP28.55■■■□□ 2.16
LTBP4-206ENST00000546155 QRICH2Q9H0J4 1663 aa28.54■■■□□ 2.16
LTBP4-206ENST00000546155 NUTM2GQ5VZR2 741 aa28.54■■■□□ 2.16
LTBP4-206ENST00000546155 CABP1Q9NZU7 370 aa28.54■■■□□ 2.16
LTBP4-206ENST00000546155 PPIP5K1Q6PFW1 1433 aa28.53■■■□□ 2.16
LTBP4-206ENST00000546155 RALGAPBQ86X10 1494 aa28.53■■■□□ 2.16
LTBP4-206ENST00000546155 RBM6P78332 1123 aaKnown RBP28.5■■■□□ 2.15
LTBP4-206ENST00000546155 TRPC5Q9UL62 973 aaPredicted RBP28.5■■■□□ 2.15
LTBP4-206ENST00000546155 POLR3AO14802 1390 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms