RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
CADM1-220ENST00000546000 TULP4Q9NRJ4 1543 aa23.89■■□□□ 1.42
CADM1-220ENST00000546000 ZNF335Q9H4Z2 1342 aaPredicted RBP23.89■■□□□ 1.42
CADM1-220ENST00000546000 MINK1Q8N4C8 1332 aaPredicted RBP23.88■■□□□ 1.41
CADM1-220ENST00000546000 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
CADM1-220ENST00000546000 NALCNQ8IZF0 1738 aa23.85■■□□□ 1.41
CADM1-220ENST00000546000 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
CADM1-220ENST00000546000 KIF7Q2M1P5 1343 aa23.83■■□□□ 1.4
CADM1-220ENST00000546000 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.4
CADM1-220ENST00000546000 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
CADM1-220ENST00000546000 ADGRB2O60241 1585 aa23.82■■□□□ 1.4
CADM1-220ENST00000546000 CCDC7Q96M83 1385 aa23.81■■□□□ 1.4
CADM1-220ENST00000546000 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
CADM1-220ENST00000546000 TMF1P82094 1093 aa23.79■■□□□ 1.4
CADM1-220ENST00000546000 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
CADM1-220ENST00000546000 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
CADM1-220ENST00000546000 TMEM94Q12767 1356 aa23.77■■□□□ 1.4
CADM1-220ENST00000546000 LRRC7Q96NW7 1537 aa23.76■■□□□ 1.39
CADM1-220ENST00000546000 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
CADM1-220ENST00000546000 MYOM1P52179 1685 aa23.75■■□□□ 1.39
CADM1-220ENST00000546000 CABP2Q9NPB3 220 aa23.74■■□□□ 1.39
CADM1-220ENST00000546000 LTBP4Q8N2S1 1624 aa23.73■■□□□ 1.39
CADM1-220ENST00000546000 EVC2Q86UK5 1308 aa23.73■■□□□ 1.39
CADM1-220ENST00000546000 CDC42BPGQ6DT37 1551 aa23.73■■□□□ 1.39
CADM1-220ENST00000546000 CDK19Q9BWU1 502 aa23.72■■□□□ 1.39
CADM1-220ENST00000546000 C14orf37Q86TY3 774 aa23.71■■□□□ 1.39
CADM1-220ENST00000546000 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.39
CADM1-220ENST00000546000 WASLO00401 505 aaPredicted RBP23.7■■□□□ 1.38
CADM1-220ENST00000546000 SRPK2P78362 688 aaKnown RBP23.7■■□□□ 1.38
CADM1-220ENST00000546000 USP32Q8NFA0 1604 aa23.7■■□□□ 1.38
CADM1-220ENST00000546000 NUTM2FA1L443 756 aa23.69■■□□□ 1.38
CADM1-220ENST00000546000 ATP7BP35670 1465 aa23.68■■□□□ 1.38
CADM1-220ENST00000546000 IQSEC2Q5JU85 1478 aa23.68■■□□□ 1.38
CADM1-220ENST00000546000 PRR36Q9H6K5 1346 aa23.68■■□□□ 1.38
CADM1-220ENST00000546000 TOPAZ1Q8N9V7 1692 aa23.65■■□□□ 1.38
CADM1-220ENST00000546000 DDX10Q13206 875 aaKnown RBP23.65■■□□□ 1.38
CADM1-220ENST00000546000 CDCA8Q53HL2 280 aa23.63■■□□□ 1.37
CADM1-220ENST00000546000 RGPD8O14715 1765 aaPredicted RBP23.63■■□□□ 1.37
CADM1-220ENST00000546000 NCOA3Q9Y6Q9 1424 aa23.61■■□□□ 1.37
CADM1-220ENST00000546000 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
CADM1-220ENST00000546000 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
CADM1-220ENST00000546000 TMC1Q8TDI8 760 aa23.6■■□□□ 1.37
CADM1-220ENST00000546000 NUDT16Q96DE0 195 aaKnown RBP23.6■■□□□ 1.37
CADM1-220ENST00000546000 MSH6P52701 1360 aa23.6■■□□□ 1.37
CADM1-220ENST00000546000 PPIP5K1Q6PFW1 1433 aa23.59■■□□□ 1.37
CADM1-220ENST00000546000 SLC12A5Q9H2X9 1139 aa23.58■■□□□ 1.37
CADM1-220ENST00000546000 DCCP43146 1447 aa23.58■■□□□ 1.36
CADM1-220ENST00000546000 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
CADM1-220ENST00000546000 C19orf44Q9H6X5 657 aa23.57■■□□□ 1.36
CADM1-220ENST00000546000 MST1RQ04912 1400 aa23.57■■□□□ 1.36
CADM1-220ENST00000546000 CD163L1Q9NR16 1453 aa23.56■■□□□ 1.36
CADM1-220ENST00000546000 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
CADM1-220ENST00000546000 PUS7Q96PZ0 661 aaKnown RBP23.56■■□□□ 1.36
CADM1-220ENST00000546000 CABP1Q9NZU7 370 aa23.54■■□□□ 1.36
CADM1-220ENST00000546000 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
CADM1-220ENST00000546000 ATF3P18847 181 aa23.53■■□□□ 1.36
CADM1-220ENST00000546000 PANK3Q9H999 370 aa23.53■■□□□ 1.36
CADM1-220ENST00000546000 A0A1W2PP64 1363 aa23.52■■□□□ 1.36
CADM1-220ENST00000546000 CCDC61Q9Y6R9 512 aa23.51■■□□□ 1.35
CADM1-220ENST00000546000 PMFBP1Q8TBY8 1022 aa23.5■■□□□ 1.35
CADM1-220ENST00000546000 ANKRD36BQ8N2N9 1353 aa23.5■■□□□ 1.35
CADM1-220ENST00000546000 NINLQ9Y2I6 1382 aa23.5■■□□□ 1.35
CADM1-220ENST00000546000 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
CADM1-220ENST00000546000 AKAP12Q02952 1782 aa23.49■■□□□ 1.35
CADM1-220ENST00000546000 SOCS7O14512 581 aa23.48■■□□□ 1.35
CADM1-220ENST00000546000 CADPS2Q86UW7 1296 aa23.48■■□□□ 1.35
CADM1-220ENST00000546000 NSD3Q9BZ95 1437 aa23.48■■□□□ 1.35
CADM1-220ENST00000546000 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
CADM1-220ENST00000546000 MON2Q7Z3U7 1717 aa23.47■■□□□ 1.35
CADM1-220ENST00000546000 ESCO1Q5FWF5 840 aa23.46■■□□□ 1.35
CADM1-220ENST00000546000 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
CADM1-220ENST00000546000 CPSF1Q10570 1443 aaKnown RBP23.45■■□□□ 1.34
CADM1-220ENST00000546000 ACEP12821 1306 aa23.45■■□□□ 1.34
CADM1-220ENST00000546000 NRKQ7Z2Y5 1582 aa23.44■■□□□ 1.34
CADM1-220ENST00000546000 PLEKHG3A1L390 1219 aa23.44■■□□□ 1.34
CADM1-220ENST00000546000 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
CADM1-220ENST00000546000 ILDR2Q71H61 639 aa23.44■■□□□ 1.34
CADM1-220ENST00000546000 PHF8Q9UPP1 1060 aa23.44■■□□□ 1.34
CADM1-220ENST00000546000 KIF1AQ12756 1690 aa23.43■■□□□ 1.34
CADM1-220ENST00000546000 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
CADM1-220ENST00000546000 KTN1Q86UP2 1357 aaKnown RBP23.41■■□□□ 1.34
CADM1-220ENST00000546000 HDGFL2Q7Z4V5 671 aaPredicted RBP23.41■■□□□ 1.34
CADM1-220ENST00000546000 TERF2IPQ9NYB0 399 aa23.41■■□□□ 1.34
CADM1-220ENST00000546000 PER1O15534 1290 aaPredicted RBP23.4■■□□□ 1.34
CADM1-220ENST00000546000 NGDNQ8NEJ9 315 aaKnown RBP23.4■■□□□ 1.34
CADM1-220ENST00000546000 DDX17Q92841 729 aaKnown RBP23.4■■□□□ 1.34
CADM1-220ENST00000546000 USP6P35125 1406 aa23.4■■□□□ 1.34
CADM1-220ENST00000546000 SLAIN2Q9P270 581 aa23.39■■□□□ 1.33
CADM1-220ENST00000546000 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
CADM1-220ENST00000546000 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
CADM1-220ENST00000546000 EDC4Q6P2E9 1401 aaKnown RBP23.36■■□□□ 1.33
CADM1-220ENST00000546000 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
CADM1-220ENST00000546000 FOXO3O43524 673 aa23.35■■□□□ 1.33
CADM1-220ENST00000546000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.35■■□□□ 1.33
CADM1-220ENST00000546000 KIF20BQ96Q89 1820 aa23.35■■□□□ 1.33
CADM1-220ENST00000546000 SSH2Q76I76 1423 aa23.34■■□□□ 1.33
CADM1-220ENST00000546000 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
CADM1-220ENST00000546000 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
CADM1-220ENST00000546000 TRPM3Q9HCF6 1732 aaPredicted RBP23.33■■□□□ 1.33
CADM1-220ENST00000546000 UBAP1LF5GYI3 381 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms