RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 TMF1P82094 1093 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 PANK3Q9H999 370 aa8.63□□□□□ -1.03
NECAP1-208ENST00000545807 TET3O43151 1660 aa8.62□□□□□ -1.03
NECAP1-208ENST00000545807 PTPRTO14522 1441 aa8.62□□□□□ -1.03
NECAP1-208ENST00000545807 SPHKAPQ2M3C7 1700 aa8.62□□□□□ -1.03
NECAP1-208ENST00000545807 GLI2P10070 1586 aa8.62□□□□□ -1.03
NECAP1-208ENST00000545807 TESK2Q96S53 571 aa8.62□□□□□ -1.03
NECAP1-208ENST00000545807 ABCC3O15438 1527 aa8.62□□□□□ -1.03
NECAP1-208ENST00000545807 EFCAB6Q5THR3 1501 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-208ENST00000545807 RGS22Q8NE09 1264 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 KIF13AQ9H1H9 1805 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 TRPM2O94759 1503 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 DMTNQ08495 405 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.61□□□□□ -1.03
NECAP1-208ENST00000545807 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
NECAP1-208ENST00000545807 DEPDC5O75140 1603 aa8.6□□□□□ -1.03
NECAP1-208ENST00000545807 L1TD1Q5T7N2 865 aaKnown RBP8.6□□□□□ -1.03
NECAP1-208ENST00000545807 FBXO3Q9UK99 471 aa8.6□□□□□ -1.03
NECAP1-208ENST00000545807 TNNT2P45379 298 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-208ENST00000545807 PPP4R3BQ5MIZ7 849 aa8.6□□□□□ -1.03
NECAP1-208ENST00000545807 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
NECAP1-208ENST00000545807 ZHX1Q9UKY1 873 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-208ENST00000545807 RNF17Q9BXT8 1623 aaKnown RBP8.59□□□□□ -1.03
NECAP1-208ENST00000545807 VWDEQ8N2E2 1590 aa8.59□□□□□ -1.03
NECAP1-208ENST00000545807 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
NECAP1-208ENST00000545807 SLC52A1Q9NWF4 448 aa8.58□□□□□ -1.04
NECAP1-208ENST00000545807 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-208ENST00000545807 MMP14P50281 582 aa8.57□□□□□ -1.04
NECAP1-208ENST00000545807 POGKQ9P215 609 aa8.57□□□□□ -1.04
NECAP1-208ENST00000545807 TRPM1Q7Z4N2 1603 aa8.57□□□□□ -1.04
NECAP1-208ENST00000545807 ZMYM3Q14202 1370 aa8.57□□□□□ -1.04
NECAP1-208ENST00000545807 NUTM2FA1L443 756 aa8.57□□□□□ -1.04
NECAP1-208ENST00000545807 KCNG1Q9UIX4 513 aa8.57□□□□□ -1.04
NECAP1-208ENST00000545807 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-208ENST00000545807 CABP2Q9NPB3 220 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 KIF1BO60333 1816 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 SIGLEC1Q9BZZ2 1709 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 KIF20AO95235 890 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 C14orf93Q9H972 538 aaKnown RBP8.56□□□□□ -1.04
NECAP1-208ENST00000545807 MROH2AA6NES4 1674 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 TERF1P54274 439 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 WAPLQ7Z5K2 1190 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 SLC12A5Q9H2X9 1139 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 KNSTRNQ9Y448 316 aa8.56□□□□□ -1.04
NECAP1-208ENST00000545807 CAMSAP1Q5T5Y3 1602 aa8.55□□□□□ -1.04
NECAP1-208ENST00000545807 SRPK2P78362 688 aaKnown RBP8.55□□□□□ -1.04
NECAP1-208ENST00000545807 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
NECAP1-208ENST00000545807 VGLL3A8MV65 326 aa8.55□□□□□ -1.04
NECAP1-208ENST00000545807 SLC26A8Q96RN1 970 aa8.55□□□□□ -1.04
NECAP1-208ENST00000545807 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
NECAP1-208ENST00000545807 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
NECAP1-208ENST00000545807 SYNMO15061 1565 aa8.54□□□□□ -1.04
NECAP1-208ENST00000545807 MADDQ8WXG6 1647 aa8.54□□□□□ -1.04
NECAP1-208ENST00000545807 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
NECAP1-208ENST00000545807 SCAF11Q99590 1463 aaKnown RBP8.53□□□□□ -1.04
NECAP1-208ENST00000545807 IRX3P78415 501 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-208ENST00000545807 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
NECAP1-208ENST00000545807 LMTK2Q8IWU2 1503 aa8.53□□□□□ -1.04
NECAP1-208ENST00000545807 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
NECAP1-208ENST00000545807 TCERG1O14776 1098 aaKnown RBP8.53□□□□□ -1.04
NECAP1-208ENST00000545807 ZSCAN20P17040 1043 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-208ENST00000545807 EIF3AQ14152 1382 aaKnown RBP8.52□□□□□ -1.04
NECAP1-208ENST00000545807 RNF123Q5XPI4 1314 aa8.52□□□□□ -1.04
NECAP1-208ENST00000545807 CDK11BP21127 795 aaKnown RBP8.52□□□□□ -1.05
NECAP1-208ENST00000545807 RIPK4P57078 832 aa8.52□□□□□ -1.05
NECAP1-208ENST00000545807 MTERF4Q7Z6M4 381 aaKnown RBP8.52□□□□□ -1.05
NECAP1-208ENST00000545807 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.05
NECAP1-208ENST00000545807 TAF3Q5VWG9 929 aa8.52□□□□□ -1.05
NECAP1-208ENST00000545807 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
NECAP1-208ENST00000545807 ZMYM4Q5VZL5 1548 aa8.52□□□□□ -1.05
NECAP1-208ENST00000545807 PER1O15534 1290 aaPredicted RBP8.51□□□□□ -1.05
NECAP1-208ENST00000545807 MS4A1P11836 297 aa8.51□□□□□ -1.05
NECAP1-208ENST00000545807 SLC20A2Q08357 652 aa8.51□□□□□ -1.05
NECAP1-208ENST00000545807 MYO5BQ9ULV0 1848 aa8.51□□□□□ -1.05
NECAP1-208ENST00000545807 ERVK-7P63135 1459 aa8.51□□□□□ -1.05
NECAP1-208ENST00000545807 KTN1Q86UP2 1357 aaKnown RBP8.51□□□□□ -1.05
NECAP1-208ENST00000545807 FRAT2O75474 233 aaPredicted RBP8.51□□□□□ -1.05
NECAP1-208ENST00000545807 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
NECAP1-208ENST00000545807 PDE4AP27815 886 aa8.51□□□□□ -1.05
NECAP1-208ENST00000545807 GTPBP4Q9BZE4 634 aaKnown RBP8.51□□□□□ -1.05
NECAP1-208ENST00000545807 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
NECAP1-208ENST00000545807 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
NECAP1-208ENST00000545807 ANP32BQ92688 251 aaKnown RBP8.5□□□□□ -1.05
NECAP1-208ENST00000545807 TNRQ92752 1358 aa8.5□□□□□ -1.05
NECAP1-208ENST00000545807 ESPNB1AK53 854 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-208ENST00000545807 LTKP29376 864 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 CARD14Q9BXL6 1004 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 PIK3C2GO75747 1445 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 ARHGAP31Q2M1Z3 1444 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 CLGNO14967 610 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 XRCC6P12956 609 aaKnown RBP eCLIP8.49□□□□□ -1.05
NECAP1-208ENST00000545807 PSEN1P49768 467 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
NECAP1-208ENST00000545807 PREX1Q8TCU6 1659 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms