RNA–Protein interactions for RNA: ENST00000545436.5

LMO3-232, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-232ENST00000545436 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
LMO3-232ENST00000545436 STK26Q9P289 416 aa17.3■□□□□ 0.36
LMO3-232ENST00000545436 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
LMO3-232ENST00000545436 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
LMO3-232ENST00000545436 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
LMO3-232ENST00000545436 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
LMO3-232ENST00000545436 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
LMO3-232ENST00000545436 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
LMO3-232ENST00000545436 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
LMO3-232ENST00000545436 DCCP43146 1447 aa17.24■□□□□ 0.35
LMO3-232ENST00000545436 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
LMO3-232ENST00000545436 WASHC2AQ641Q2 1341 aa17.23■□□□□ 0.35
LMO3-232ENST00000545436 ADGRL3Q9HAR2 1447 aa17.23■□□□□ 0.35
LMO3-232ENST00000545436 DISP3Q9P2K9 1392 aa17.23■□□□□ 0.35
LMO3-232ENST00000545436 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
LMO3-232ENST00000545436 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
LMO3-232ENST00000545436 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.34
LMO3-232ENST00000545436 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
LMO3-232ENST00000545436 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
LMO3-232ENST00000545436 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
LMO3-232ENST00000545436 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
LMO3-232ENST00000545436 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
LMO3-232ENST00000545436 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
LMO3-232ENST00000545436 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
LMO3-232ENST00000545436 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
LMO3-232ENST00000545436 PROSER2Q86WR7 435 aaPredicted RBP17.17■□□□□ 0.34
LMO3-232ENST00000545436 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
LMO3-232ENST00000545436 MYOM1P52179 1685 aa17.16■□□□□ 0.34
LMO3-232ENST00000545436 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
LMO3-232ENST00000545436 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
LMO3-232ENST00000545436 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
LMO3-232ENST00000545436 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
LMO3-232ENST00000545436 ATP7BP35670 1465 aa17.15■□□□□ 0.34
LMO3-232ENST00000545436 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
LMO3-232ENST00000545436 TOPAZ1Q8N9V7 1692 aa17.14■□□□□ 0.33
LMO3-232ENST00000545436 TMEM94Q12767 1356 aa17.14■□□□□ 0.33
LMO3-232ENST00000545436 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
LMO3-232ENST00000545436 MSH6P52701 1360 aa17.13■□□□□ 0.33
LMO3-232ENST00000545436 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
LMO3-232ENST00000545436 LTBP4Q8N2S1 1624 aa17.11■□□□□ 0.33
LMO3-232ENST00000545436 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
LMO3-232ENST00000545436 ZNF335Q9H4Z2 1342 aaPredicted RBP17.11■□□□□ 0.33
LMO3-232ENST00000545436 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
LMO3-232ENST00000545436 IQSEC2Q5JU85 1478 aa17.11■□□□□ 0.33
LMO3-232ENST00000545436 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
LMO3-232ENST00000545436 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
LMO3-232ENST00000545436 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
LMO3-232ENST00000545436 NUDT16Q96DE0 195 aaKnown RBP17.09■□□□□ 0.33
LMO3-232ENST00000545436 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
LMO3-232ENST00000545436 KIF1AQ12756 1690 aa17.08■□□□□ 0.32
LMO3-232ENST00000545436 KTN1Q86UP2 1357 aaKnown RBP17.08■□□□□ 0.32
LMO3-232ENST00000545436 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
LMO3-232ENST00000545436 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
LMO3-232ENST00000545436 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
LMO3-232ENST00000545436 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
LMO3-232ENST00000545436 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
LMO3-232ENST00000545436 ATF3P18847 181 aa17.07■□□□□ 0.32
LMO3-232ENST00000545436 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
LMO3-232ENST00000545436 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
LMO3-232ENST00000545436 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
LMO3-232ENST00000545436 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
LMO3-232ENST00000545436 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
LMO3-232ENST00000545436 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
LMO3-232ENST00000545436 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
LMO3-232ENST00000545436 POLR3AO14802 1390 aaPredicted RBP17.04■□□□□ 0.32
LMO3-232ENST00000545436 NSD2O96028 1365 aa17.04■□□□□ 0.32
LMO3-232ENST00000545436 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
LMO3-232ENST00000545436 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
LMO3-232ENST00000545436 MST1RQ04912 1400 aa17.03■□□□□ 0.32
LMO3-232ENST00000545436 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
LMO3-232ENST00000545436 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
LMO3-232ENST00000545436 PANK3Q9H999 370 aa17.02■□□□□ 0.32
LMO3-232ENST00000545436 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
LMO3-232ENST00000545436 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
LMO3-232ENST00000545436 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
LMO3-232ENST00000545436 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
LMO3-232ENST00000545436 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
LMO3-232ENST00000545436 RGPD8O14715 1765 aaPredicted RBP17.01■□□□□ 0.31
LMO3-232ENST00000545436 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
LMO3-232ENST00000545436 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
LMO3-232ENST00000545436 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
LMO3-232ENST00000545436 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
LMO3-232ENST00000545436 ANP32CO43423 234 aa16.97■□□□□ 0.31
LMO3-232ENST00000545436 PHF8Q9UPP1 1060 aa16.97■□□□□ 0.31
LMO3-232ENST00000545436 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
LMO3-232ENST00000545436 USP6P35125 1406 aa16.96■□□□□ 0.31
LMO3-232ENST00000545436 RALBP1Q15311 655 aa16.96■□□□□ 0.31
LMO3-232ENST00000545436 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
LMO3-232ENST00000545436 ACEP12821 1306 aa16.96■□□□□ 0.3
LMO3-232ENST00000545436 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
LMO3-232ENST00000545436 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
LMO3-232ENST00000545436 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
LMO3-232ENST00000545436 RBM33Q96EV2 1170 aaKnown RBP16.94■□□□□ 0.3
LMO3-232ENST00000545436 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
LMO3-232ENST00000545436 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
LMO3-232ENST00000545436 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
LMO3-232ENST00000545436 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
LMO3-232ENST00000545436 NPHP3Q7Z494 1330 aa16.93■□□□□ 0.3
LMO3-232ENST00000545436 CARD14Q9BXL6 1004 aa16.92■□□□□ 0.3
LMO3-232ENST00000545436 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms