RNA–Protein interactions for RNA: ENST00000545097.1

CCR3-208, Transcript of C-C motif chemokine receptor 3, human

TSL 1 (best) BASIC

Gene CCR3, Length 1,786 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCR3-208	ENST00000545097	TRIM26	Q12899	539 aa	Predicted RBP	11.92	□□□□□ -0.5
CCR3-208	ENST00000545097	DCC	P43146	1447 aa		11.92	□□□□□ -0.5
CCR3-208	ENST00000545097	USP32	Q8NFA0	1604 aa		11.91	□□□□□ -0.5
CCR3-208	ENST00000545097	KIAA1210	Q9ULL0	1709 aa		11.9	□□□□□ -0.5
CCR3-208	ENST00000545097	ABCC11	Q96J66	1382 aa		11.9	□□□□□ -0.5
CCR3-208	ENST00000545097	BRINP3	Q76B58	766 aa		11.9	□□□□□ -0.5
CCR3-208	ENST00000545097	C1orf167	Q5SNV9	1468 aa		11.9	□□□□□ -0.5
CCR3-208	ENST00000545097	ILDR2	Q71H61	639 aa		11.89	□□□□□ -0.51
CCR3-208	ENST00000545097	TRPM1	Q7Z4N2	1603 aa		11.89	□□□□□ -0.51
CCR3-208	ENST00000545097	DLC1	Q96QB1	1528 aa		11.89	□□□□□ -0.51
CCR3-208	ENST00000545097	DISP3	Q9P2K9	1392 aa		11.88	□□□□□ -0.51
CCR3-208	ENST00000545097	SHPRH	Q149N8	1683 aa		11.88	□□□□□ -0.51
CCR3-208	ENST00000545097	ATF3	P18847	181 aa		11.88	□□□□□ -0.51
CCR3-208	ENST00000545097	LRP6	O75581	1613 aa		11.88	□□□□□ -0.51
CCR3-208	ENST00000545097	CADPS2	Q86UW7	1296 aa		11.87	□□□□□ -0.51
CCR3-208	ENST00000545097	ORAI2	Q96SN7	254 aa		11.87	□□□□□ -0.51
CCR3-208	ENST00000545097	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
CCR3-208	ENST00000545097	NBPF1	Q3BBV0	1214 aa		11.87	□□□□□ -0.51
CCR3-208	ENST00000545097	ADGRB2	O60241	1585 aa		11.86	□□□□□ -0.51
CCR3-208	ENST00000545097	NUTM2F	A1L443	756 aa		11.86	□□□□□ -0.51
CCR3-208	ENST00000545097	L3MBTL2	Q969R5	705 aa		11.86	□□□□□ -0.51
CCR3-208	ENST00000545097	NEUROD1	Q13562	356 aa		11.85	□□□□□ -0.51
CCR3-208	ENST00000545097	TRAK1	Q9UPV9	953 aa		11.85	□□□□□ -0.51
CCR3-208	ENST00000545097	PRAM1	Q96QH2	718 aa		11.84	□□□□□ -0.51
CCR3-208	ENST00000545097	RGS17	Q9UGC6	210 aa	Predicted RBP	11.83	□□□□□ -0.52
CCR3-208	ENST00000545097	QRICH2	Q9H0J4	1663 aa		11.83	□□□□□ -0.52
CCR3-208	ENST00000545097	PXDN	Q92626	1479 aa		11.82	□□□□□ -0.52
CCR3-208	ENST00000545097	NBPF8	Q3BBV2	869 aa		11.82	□□□□□ -0.52
CCR3-208	ENST00000545097	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.82	□□□□□ -0.52
CCR3-208	ENST00000545097	PRR36	Q9H6K5	1346 aa		11.81	□□□□□ -0.52
CCR3-208	ENST00000545097	TOPAZ1	Q8N9V7	1692 aa		11.8	□□□□□ -0.52
CCR3-208	ENST00000545097	XPC	Q01831	940 aa	Predicted RBP	11.8	□□□□□ -0.52
CCR3-208	ENST00000545097	KIF1A	Q12756	1690 aa		11.8	□□□□□ -0.52
CCR3-208	ENST00000545097	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.8	□□□□□ -0.52
CCR3-208	ENST00000545097	JCAD	Q9P266	1359 aa		11.8	□□□□□ -0.52
CCR3-208	ENST00000545097	SIRT1	Q96EB6	747 aa		11.79	□□□□□ -0.52
CCR3-208	ENST00000545097	PCGF6	Q9BYE7	350 aa		11.79	□□□□□ -0.52
CCR3-208	ENST00000545097	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.79	□□□□□ -0.52
CCR3-208	ENST00000545097	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.79	□□□□□ -0.52
CCR3-208	ENST00000545097	ABCA3	Q99758	1704 aa		11.79	□□□□□ -0.52
CCR3-208	ENST00000545097	PNPLA6	Q8IY17	1366 aa		11.78	□□□□□ -0.52
CCR3-208	ENST00000545097	ESCO1	Q5FWF5	840 aa		11.77	□□□□□ -0.52
CCR3-208	ENST00000545097	SOS2	Q07890	1332 aa	Predicted RBP	11.77	□□□□□ -0.53
CCR3-208	ENST00000545097	TULP4	Q9NRJ4	1543 aa		11.77	□□□□□ -0.53
CCR3-208	ENST00000545097	ATP7B	P35670	1465 aa		11.77	□□□□□ -0.53
CCR3-208	ENST00000545097	POGK	Q9P215	609 aa		11.77	□□□□□ -0.53
CCR3-208	ENST00000545097	MARF1	Q9Y4F3	1742 aa	Known RBP	11.77	□□□□□ -0.53
CCR3-208	ENST00000545097	ITSN1	Q15811	1721 aa		11.75	□□□□□ -0.53
CCR3-208	ENST00000545097	CRYBG1	Q9Y4K1	1723 aa		11.75	□□□□□ -0.53
CCR3-208	ENST00000545097	FOXO3	O43524	673 aa		11.75	□□□□□ -0.53
CCR3-208	ENST00000545097	ALS2	Q96Q42	1657 aa		11.75	□□□□□ -0.53
CCR3-208	ENST00000545097	POTEA	Q6S8J7	498 aa		11.74	□□□□□ -0.53
CCR3-208	ENST00000545097	STAC3	Q96MF2	364 aa		11.74	□□□□□ -0.53
CCR3-208	ENST00000545097	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.73	□□□□□ -0.53
CCR3-208	ENST00000545097	NUTM2E	B1AL46	878 aa	Predicted RBP	11.73	□□□□□ -0.53
CCR3-208	ENST00000545097	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.73	□□□□□ -0.53
CCR3-208	ENST00000545097	PMFBP1	Q8TBY8	1022 aa		11.73	□□□□□ -0.53
CCR3-208	ENST00000545097	RALGAPB	Q86X10	1494 aa		11.73	□□□□□ -0.53
CCR3-208	ENST00000545097	WASL	O00401	505 aa	Predicted RBP	11.72	□□□□□ -0.53
CCR3-208	ENST00000545097	ANKAR	Q7Z5J8	1434 aa		11.72	□□□□□ -0.53
CCR3-208	ENST00000545097	GPRASP1	Q5JY77	1395 aa		11.71	□□□□□ -0.53
CCR3-208	ENST00000545097	PHF8	Q9UPP1	1060 aa		11.71	□□□□□ -0.54
CCR3-208	ENST00000545097	ROCK2	O75116	1388 aa	Known RBP	11.7	□□□□□ -0.54
CCR3-208	ENST00000545097	SPATA31A6	Q5VVP1	1343 aa		11.7	□□□□□ -0.54
CCR3-208	ENST00000545097	TONSL	Q96HA7	1378 aa		11.7	□□□□□ -0.54
CCR3-208	ENST00000545097	NPHP3	Q7Z494	1330 aa		11.7	□□□□□ -0.54
CCR3-208	ENST00000545097	LRRC59	Q96AG4	307 aa	Known RBP	11.69	□□□□□ -0.54
CCR3-208	ENST00000545097	CDK19	Q9BWU1	502 aa		11.69	□□□□□ -0.54
CCR3-208	ENST00000545097	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.69	□□□□□ -0.54
CCR3-208	ENST00000545097	AKAP12	Q02952	1782 aa		11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	SPATA31A3	Q5VYP0	1347 aa		11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	PLEKHG5	O94827	1062 aa		11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	KRT28	Q7Z3Y7	464 aa		11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	PLCH1	Q4KWH8	1693 aa		11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	TNS3	Q68CZ2	1445 aa		11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.68	□□□□□ -0.54
CCR3-208	ENST00000545097	ADAMTS2	O95450	1211 aa		11.67	□□□□□ -0.54
CCR3-208	ENST00000545097	CABLES1	Q8TDN4	633 aa		11.67	□□□□□ -0.54
CCR3-208	ENST00000545097	NUDT16	Q96DE0	195 aa	Known RBP	11.67	□□□□□ -0.54
CCR3-208	ENST00000545097	CABP2	Q9NPB3	220 aa		11.67	□□□□□ -0.54
CCR3-208	ENST00000545097	AFF2	P51816	1311 aa		11.65	□□□□□ -0.54
CCR3-208	ENST00000545097	NRK	Q7Z2Y5	1582 aa		11.65	□□□□□ -0.54
CCR3-208	ENST00000545097	C8orf37	Q96NL8	207 aa		11.65	□□□□□ -0.54
CCR3-208	ENST00000545097	NRAP	Q86VF7	1730 aa		11.65	□□□□□ -0.54
CCR3-208	ENST00000545097	MEX3C	Q5U5Q3	659 aa	Known RBP	11.64	□□□□□ -0.55
CCR3-208	ENST00000545097	EP400	Q96L91	3159 aa		11.64	□□□□□ -0.55
CCR3-208	ENST00000545097	PIK3C2A	O00443	1686 aa		11.64	□□□□□ -0.55
CCR3-208	ENST00000545097	PPIP5K1	Q6PFW1	1433 aa		11.64	□□□□□ -0.55
CCR3-208	ENST00000545097	SBNO1	A3KN83	1393 aa		11.64	□□□□□ -0.55
CCR3-208	ENST00000545097	MON2	Q7Z3U7	1717 aa		11.63	□□□□□ -0.55
CCR3-208	ENST00000545097	POLR3A	O14802	1390 aa	Predicted RBP	11.63	□□□□□ -0.55
CCR3-208	ENST00000545097	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.63	□□□□□ -0.55
CCR3-208	ENST00000545097	ACE	P12821	1306 aa		11.63	□□□□□ -0.55
CCR3-208	ENST00000545097	EIF3A	Q14152	1382 aa	Known RBP	11.62	□□□□□ -0.55
CCR3-208	ENST00000545097	CARD11	Q9BXL7	1154 aa		11.62	□□□□□ -0.55
CCR3-208	ENST00000545097	BCL9L	Q86UU0	1499 aa		11.62	□□□□□ -0.55
CCR3-208	ENST00000545097	PSME1	Q06323	249 aa		11.62	□□□□□ -0.55
CCR3-208	ENST00000545097	CD163L1	Q9NR16	1453 aa		11.61	□□□□□ -0.55
CCR3-208	ENST00000545097	SOCS7	O14512	581 aa		11.61	□□□□□ -0.55
CCR3-208	ENST00000545097	SRPK2	P78362	688 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms