RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
DDX55-212ENST00000544738 XPCQ01831 940 aaPredicted RBP24.32■■□□□ 1.48
DDX55-212ENST00000544738 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
DDX55-212ENST00000544738 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
DDX55-212ENST00000544738 NPHP3Q7Z494 1330 aa24.3■■□□□ 1.48
DDX55-212ENST00000544738 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
DDX55-212ENST00000544738 FOXO3O43524 673 aa24.29■■□□□ 1.48
DDX55-212ENST00000544738 LAMC1P11047 1609 aa24.28■■□□□ 1.48
DDX55-212ENST00000544738 MYOM2P54296 1465 aa24.27■■□□□ 1.48
DDX55-212ENST00000544738 UNC5CLQ8IV45 518 aa24.27■■□□□ 1.48
DDX55-212ENST00000544738 SLC4A1APQ9BWU0 796 aaKnown RBP24.26■■□□□ 1.47
DDX55-212ENST00000544738 VGFO15240 615 aaPredicted RBP24.25■■□□□ 1.47
DDX55-212ENST00000544738 NUTM2FA1L443 756 aa24.23■■□□□ 1.47
DDX55-212ENST00000544738 COL22A1Q8NFW1 1626 aaPredicted RBP24.23■■□□□ 1.47
DDX55-212ENST00000544738 CLTCL1P53675 1640 aa24.22■■□□□ 1.47
DDX55-212ENST00000544738 NEXMIFQ5QGS0 1516 aa24.22■■□□□ 1.47
DDX55-212ENST00000544738 SEPT12Q8IYM1 358 aa24.22■■□□□ 1.47
DDX55-212ENST00000544738 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
DDX55-212ENST00000544738 PSDA5PKW4 1024 aaPredicted RBP24.21■■□□□ 1.47
DDX55-212ENST00000544738 KIF1BO60333 1816 aa24.19■■□□□ 1.46
DDX55-212ENST00000544738 CCDC9Q9Y3X0 531 aaKnown RBP24.18■■□□□ 1.46
DDX55-212ENST00000544738 PXDNQ92626 1479 aa24.18■■□□□ 1.46
DDX55-212ENST00000544738 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
DDX55-212ENST00000544738 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
DDX55-212ENST00000544738 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
DDX55-212ENST00000544738 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
DDX55-212ENST00000544738 RPGRIP1LQ68CZ1 1315 aa24.14■■□□□ 1.46
DDX55-212ENST00000544738 GLI3P10071 1580 aa24.14■■□□□ 1.45
DDX55-212ENST00000544738 HRCP23327 699 aa24.14■■□□□ 1.45
DDX55-212ENST00000544738 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
DDX55-212ENST00000544738 SLIT2O94813 1529 aa24.13■■□□□ 1.45
DDX55-212ENST00000544738 WAPLQ7Z5K2 1190 aa24.12■■□□□ 1.45
DDX55-212ENST00000544738 STK26Q9P289 416 aa24.12■■□□□ 1.45
DDX55-212ENST00000544738 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
DDX55-212ENST00000544738 MARF1Q9Y4F3 1742 aaKnown RBP24.11■■□□□ 1.45
DDX55-212ENST00000544738 A0A0G2JS52 829 aa24.11■■□□□ 1.45
DDX55-212ENST00000544738 BAG6P46379 1132 aa24.11■■□□□ 1.45
DDX55-212ENST00000544738 MYT1Q01538 1121 aa24.11■■□□□ 1.45
DDX55-212ENST00000544738 VPS72Q15906 364 aa24.11■■□□□ 1.45
DDX55-212ENST00000544738 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
DDX55-212ENST00000544738 CABLES1Q8TDN4 633 aa24.09■■□□□ 1.45
DDX55-212ENST00000544738 MPHOSPH9Q99550 1183 aa24.09■■□□□ 1.45
DDX55-212ENST00000544738 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.45
DDX55-212ENST00000544738 ONECUT3O60422 494 aaPredicted RBP24.08■■□□□ 1.45
DDX55-212ENST00000544738 LRP5O75197 1615 aa24.08■■□□□ 1.45
DDX55-212ENST00000544738 PRAG1Q86YV5 1406 aa24.07■■□□□ 1.44
DDX55-212ENST00000544738 CCDC144AA2RUR9 1427 aa24.06■■□□□ 1.44
DDX55-212ENST00000544738 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.06■■□□□ 1.44
DDX55-212ENST00000544738 EN1Q05925 392 aaPredicted RBP24.04■■□□□ 1.44
DDX55-212ENST00000544738 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
DDX55-212ENST00000544738 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
DDX55-212ENST00000544738 R3HDM1Q15032 1099 aaKnown RBP24.03■■□□□ 1.44
DDX55-212ENST00000544738 PSME1Q06323 249 aa24.01■■□□□ 1.43
DDX55-212ENST00000544738 FAM98CQ17RN3 349 aaKnown RBP24■■□□□ 1.43
DDX55-212ENST00000544738 PPLO60437 1756 aa23.99■■□□□ 1.43
DDX55-212ENST00000544738 FAM83GA6ND36 823 aa23.99■■□□□ 1.43
DDX55-212ENST00000544738 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
DDX55-212ENST00000544738 FAM182BQ5T319 152 aa23.98■■□□□ 1.43
DDX55-212ENST00000544738 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
DDX55-212ENST00000544738 RGL3Q3MIN7 710 aa23.97■■□□□ 1.43
DDX55-212ENST00000544738 USP32Q8NFA0 1604 aa23.97■■□□□ 1.43
DDX55-212ENST00000544738 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
DDX55-212ENST00000544738 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
DDX55-212ENST00000544738 SPATA31E1Q6ZUB1 1445 aa23.95■■□□□ 1.42
DDX55-212ENST00000544738 ANKRD30BQ9BXX2 1392 aa23.95■■□□□ 1.42
DDX55-212ENST00000544738 TNS3Q68CZ2 1445 aa23.93■■□□□ 1.42
DDX55-212ENST00000544738 YY1P25490 414 aa23.92■■□□□ 1.42
DDX55-212ENST00000544738 BTG4Q9NY30 223 aa23.92■■□□□ 1.42
DDX55-212ENST00000544738 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
DDX55-212ENST00000544738 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
DDX55-212ENST00000544738 EZH2Q15910 746 aaKnown RBP23.9■■□□□ 1.42
DDX55-212ENST00000544738 TECPR2O15040 1411 aa23.89■■□□□ 1.41
DDX55-212ENST00000544738 SBNO1A3KN83 1393 aa23.87■■□□□ 1.41
DDX55-212ENST00000544738 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
DDX55-212ENST00000544738 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
DDX55-212ENST00000544738 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
DDX55-212ENST00000544738 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
DDX55-212ENST00000544738 IFT172Q9UG01 1749 aa23.85■■□□□ 1.41
DDX55-212ENST00000544738 NWD2Q9ULI1 1742 aa23.85■■□□□ 1.41
DDX55-212ENST00000544738 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
DDX55-212ENST00000544738 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
DDX55-212ENST00000544738 TRIM37O94972 964 aa23.82■■□□□ 1.4
DDX55-212ENST00000544738 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
DDX55-212ENST00000544738 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
DDX55-212ENST00000544738 CAMKK2Q96RR4 588 aa23.81■■□□□ 1.4
DDX55-212ENST00000544738 YTHDC2Q9H6S0 1430 aaKnown RBP23.81■■□□□ 1.4
DDX55-212ENST00000544738 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
DDX55-212ENST00000544738 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
DDX55-212ENST00000544738 APBA3O96018 575 aa23.79■■□□□ 1.4
DDX55-212ENST00000544738 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
DDX55-212ENST00000544738 FAM196AQ6ZSG2 479 aa23.77■■□□□ 1.4
DDX55-212ENST00000544738 C14orf93Q9H972 538 aaKnown RBP23.77■■□□□ 1.4
DDX55-212ENST00000544738 RGPD8O14715 1765 aaPredicted RBP23.77■■□□□ 1.4
DDX55-212ENST00000544738 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
DDX55-212ENST00000544738 RGPD1P0DJD0 1748 aa23.76■■□□□ 1.39
DDX55-212ENST00000544738 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
DDX55-212ENST00000544738 DCAF8L1A6NGE4 600 aa23.75■■□□□ 1.39
DDX55-212ENST00000544738 PPP1R1BQ9UD71 204 aaPredicted RBP23.74■■□□□ 1.39
DDX55-212ENST00000544738 PRDM11Q9NQV5 511 aa23.73■■□□□ 1.39
DDX55-212ENST00000544738 POGKQ9P215 609 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms