RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 RPRD2Q5VT52 1461 aaKnown RBP17.62■□□□□ 0.41
ITGAM-202ENST00000544665 CCDC141Q6ZP82 1450 aa17.62■□□□□ 0.41
ITGAM-202ENST00000544665 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
ITGAM-202ENST00000544665 NUTM2GQ5VZR2 741 aa17.62■□□□□ 0.41
ITGAM-202ENST00000544665 CABP1Q9NZU7 370 aa17.62■□□□□ 0.41
ITGAM-202ENST00000544665 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
ITGAM-202ENST00000544665 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
ITGAM-202ENST00000544665 C1orf115Q9H7X2 142 aa17.61■□□□□ 0.41
ITGAM-202ENST00000544665 INTS3Q68E01 1043 aaKnown RBP17.6■□□□□ 0.41
ITGAM-202ENST00000544665 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
ITGAM-202ENST00000544665 PHF14O94880 888 aa17.6■□□□□ 0.41
ITGAM-202ENST00000544665 FRAT2O75474 233 aaPredicted RBP17.59■□□□□ 0.41
ITGAM-202ENST00000544665 SLFN5Q08AF3 891 aa17.59■□□□□ 0.41
ITGAM-202ENST00000544665 SKAP1Q86WV1 359 aa17.59■□□□□ 0.41
ITGAM-202ENST00000544665 PSME1Q06323 249 aa17.59■□□□□ 0.41
ITGAM-202ENST00000544665 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
ITGAM-202ENST00000544665 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
ITGAM-202ENST00000544665 CDK19Q9BWU1 502 aa17.59■□□□□ 0.41
ITGAM-202ENST00000544665 NLRP6P59044 892 aa17.58■□□□□ 0.4
ITGAM-202ENST00000544665 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
ITGAM-202ENST00000544665 C20orf194Q5TEA3 1177 aa17.58■□□□□ 0.4
ITGAM-202ENST00000544665 GRIN2AQ12879 1464 aa17.58■□□□□ 0.4
ITGAM-202ENST00000544665 CDC45O75419 566 aa17.57■□□□□ 0.4
ITGAM-202ENST00000544665 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
ITGAM-202ENST00000544665 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
ITGAM-202ENST00000544665 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
ITGAM-202ENST00000544665 SLC52A1Q9NWF4 448 aa17.56■□□□□ 0.4
ITGAM-202ENST00000544665 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
ITGAM-202ENST00000544665 MSH5O43196 834 aa17.55■□□□□ 0.4
ITGAM-202ENST00000544665 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
ITGAM-202ENST00000544665 RUFY2Q8WXA3 655 aa17.55■□□□□ 0.4
ITGAM-202ENST00000544665 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
ITGAM-202ENST00000544665 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
ITGAM-202ENST00000544665 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
ITGAM-202ENST00000544665 MVPQ14764 893 aaKnown RBP17.54■□□□□ 0.4
ITGAM-202ENST00000544665 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
ITGAM-202ENST00000544665 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
ITGAM-202ENST00000544665 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
ITGAM-202ENST00000544665 H3BQV1 296 aa17.53■□□□□ 0.4
ITGAM-202ENST00000544665 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
ITGAM-202ENST00000544665 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
ITGAM-202ENST00000544665 TOMM22Q9NS69 142 aa17.53■□□□□ 0.4
ITGAM-202ENST00000544665 MCTP1Q6DN14 999 aa17.52■□□□□ 0.4
ITGAM-202ENST00000544665 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.4
ITGAM-202ENST00000544665 KIF3AQ9Y496 699 aa17.52■□□□□ 0.4
ITGAM-202ENST00000544665 NUCB2P80303 420 aa17.52■□□□□ 0.4
ITGAM-202ENST00000544665 SF3A1Q15459 793 aaKnown RBP17.52■□□□□ 0.39
ITGAM-202ENST00000544665 FAM184AQ8NB25 1140 aa17.52■□□□□ 0.39
ITGAM-202ENST00000544665 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
ITGAM-202ENST00000544665 DDX58O95786 925 aaKnown RBP17.5■□□□□ 0.39
ITGAM-202ENST00000544665 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
ITGAM-202ENST00000544665 RPGRIP1LQ68CZ1 1315 aa17.5■□□□□ 0.39
ITGAM-202ENST00000544665 NINLQ9Y2I6 1382 aa17.49■□□□□ 0.39
ITGAM-202ENST00000544665 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
ITGAM-202ENST00000544665 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
ITGAM-202ENST00000544665 GCC1Q96CN9 775 aa17.49■□□□□ 0.39
ITGAM-202ENST00000544665 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
ITGAM-202ENST00000544665 TRAK2O60296 914 aa17.48■□□□□ 0.39
ITGAM-202ENST00000544665 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
ITGAM-202ENST00000544665 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
ITGAM-202ENST00000544665 KIF14Q15058 1648 aa17.48■□□□□ 0.39
ITGAM-202ENST00000544665 TPM4P67936 248 aa17.48■□□□□ 0.39
ITGAM-202ENST00000544665 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
ITGAM-202ENST00000544665 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
ITGAM-202ENST00000544665 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
ITGAM-202ENST00000544665 GNAI3P08754 354 aa17.47■□□□□ 0.39
ITGAM-202ENST00000544665 ABTB2Q8N961 1025 aa17.47■□□□□ 0.39
ITGAM-202ENST00000544665 GAS2L2Q8NHY3 880 aa17.47■□□□□ 0.39
ITGAM-202ENST00000544665 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
ITGAM-202ENST00000544665 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
ITGAM-202ENST00000544665 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.39
ITGAM-202ENST00000544665 GPATCH8Q9UKJ3 1502 aaKnown RBP17.46■□□□□ 0.39
ITGAM-202ENST00000544665 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.39
ITGAM-202ENST00000544665 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
ITGAM-202ENST00000544665 CCDC30Q5VVM6 783 aa17.46■□□□□ 0.38
ITGAM-202ENST00000544665 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
ITGAM-202ENST00000544665 SMC3Q9UQE7 1217 aa17.45■□□□□ 0.38
ITGAM-202ENST00000544665 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
ITGAM-202ENST00000544665 THUMPD2Q9BTF0 503 aaKnown RBP17.45■□□□□ 0.38
ITGAM-202ENST00000544665 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
ITGAM-202ENST00000544665 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
ITGAM-202ENST00000544665 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
ITGAM-202ENST00000544665 ERC2O15083 957 aa17.44■□□□□ 0.38
ITGAM-202ENST00000544665 NEK4P51957 841 aa17.44■□□□□ 0.38
ITGAM-202ENST00000544665 TMEM57Q8N5G2 664 aa17.44■□□□□ 0.38
ITGAM-202ENST00000544665 FCHSD2O94868 740 aa17.44■□□□□ 0.38
ITGAM-202ENST00000544665 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
ITGAM-202ENST00000544665 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
ITGAM-202ENST00000544665 RNF20Q5VTR2 975 aa17.43■□□□□ 0.38
ITGAM-202ENST00000544665 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
ITGAM-202ENST00000544665 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
ITGAM-202ENST00000544665 EVA1CP58658 441 aa17.43■□□□□ 0.38
ITGAM-202ENST00000544665 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
ITGAM-202ENST00000544665 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
ITGAM-202ENST00000544665 MRE11P49959 708 aa17.42■□□□□ 0.38
ITGAM-202ENST00000544665 CCDC34Q96HJ3 373 aa17.42■□□□□ 0.38
ITGAM-202ENST00000544665 BECN2A8MW95 431 aa17.41■□□□□ 0.38
ITGAM-202ENST00000544665 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
ITGAM-202ENST00000544665 GNAI2P04899 355 aa17.41■□□□□ 0.38
ITGAM-202ENST00000544665 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms