RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 MYOM2P54296 1465 aa23.56■■□□□ 1.36
CD4-212ENST00000544344 EP400Q96L91 3159 aa23.56■■□□□ 1.36
CD4-212ENST00000544344 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
CD4-212ENST00000544344 PXDNQ92626 1479 aa23.54■■□□□ 1.36
CD4-212ENST00000544344 RPGRIP1LQ68CZ1 1315 aa23.54■■□□□ 1.36
CD4-212ENST00000544344 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
CD4-212ENST00000544344 BCL9LQ86UU0 1499 aa23.53■■□□□ 1.36
CD4-212ENST00000544344 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.36
CD4-212ENST00000544344 MARF1Q9Y4F3 1742 aaKnown RBP23.52■■□□□ 1.36
CD4-212ENST00000544344 NPHP3Q7Z494 1330 aa23.49■■□□□ 1.35
CD4-212ENST00000544344 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
CD4-212ENST00000544344 FOXO3O43524 673 aa23.45■■□□□ 1.34
CD4-212ENST00000544344 XPCQ01831 940 aaPredicted RBP23.45■■□□□ 1.34
CD4-212ENST00000544344 TECPR2O15040 1411 aa23.43■■□□□ 1.34
CD4-212ENST00000544344 ADGRF5Q8IZF2 1346 aa23.43■■□□□ 1.34
CD4-212ENST00000544344 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
CD4-212ENST00000544344 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
CD4-212ENST00000544344 GJD4Q96KN9 370 aaPredicted RBP23.42■■□□□ 1.34
CD4-212ENST00000544344 WAPLQ7Z5K2 1190 aa23.41■■□□□ 1.34
CD4-212ENST00000544344 ZRANB1Q9UGI0 708 aa23.41■■□□□ 1.34
CD4-212ENST00000544344 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
CD4-212ENST00000544344 GLI3P10071 1580 aa23.4■■□□□ 1.34
CD4-212ENST00000544344 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
CD4-212ENST00000544344 PLEKHH1Q9ULM0 1364 aa23.39■■□□□ 1.33
CD4-212ENST00000544344 SLIT2O94813 1529 aa23.38■■□□□ 1.33
CD4-212ENST00000544344 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
CD4-212ENST00000544344 FOXD1Q16676 465 aa23.38■■□□□ 1.33
CD4-212ENST00000544344 KNDC1Q76NI1 1749 aa23.38■■□□□ 1.33
CD4-212ENST00000544344 FMN2Q9NZ56 1722 aa23.38■■□□□ 1.33
CD4-212ENST00000544344 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
CD4-212ENST00000544344 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
CD4-212ENST00000544344 STK26Q9P289 416 aa23.37■■□□□ 1.33
CD4-212ENST00000544344 RALGAPBQ86X10 1494 aa23.36■■□□□ 1.33
CD4-212ENST00000544344 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
CD4-212ENST00000544344 SPATA31A3Q5VYP0 1347 aa23.35■■□□□ 1.33
CD4-212ENST00000544344 BRWD3Q6RI45 1802 aa23.34■■□□□ 1.33
CD4-212ENST00000544344 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
CD4-212ENST00000544344 KIF1AQ12756 1690 aa23.34■■□□□ 1.33
CD4-212ENST00000544344 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
CD4-212ENST00000544344 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
CD4-212ENST00000544344 PIK3C2GO75747 1445 aa23.32■■□□□ 1.32
CD4-212ENST00000544344 ANKRD30BQ9BXX2 1392 aa23.31■■□□□ 1.32
CD4-212ENST00000544344 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
CD4-212ENST00000544344 CCDC144AA2RUR9 1427 aa23.31■■□□□ 1.32
CD4-212ENST00000544344 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
CD4-212ENST00000544344 RGPD8O14715 1765 aaPredicted RBP23.29■■□□□ 1.32
CD4-212ENST00000544344 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
CD4-212ENST00000544344 KRT28Q7Z3Y7 464 aa23.28■■□□□ 1.32
CD4-212ENST00000544344 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
CD4-212ENST00000544344 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
CD4-212ENST00000544344 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
CD4-212ENST00000544344 PLCH1Q4KWH8 1693 aa23.25■■□□□ 1.31
CD4-212ENST00000544344 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
CD4-212ENST00000544344 NWD2Q9ULI1 1742 aa23.24■■□□□ 1.31
CD4-212ENST00000544344 ONECUT3O60422 494 aaPredicted RBP23.23■■□□□ 1.31
CD4-212ENST00000544344 VPS72Q15906 364 aa23.23■■□□□ 1.31
CD4-212ENST00000544344 SEPT12Q8IYM1 358 aa23.23■■□□□ 1.31
CD4-212ENST00000544344 CABLES1Q8TDN4 633 aa23.23■■□□□ 1.31
CD4-212ENST00000544344 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
CD4-212ENST00000544344 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
CD4-212ENST00000544344 NRXN1Q9ULB1 1477 aa23.21■■□□□ 1.31
CD4-212ENST00000544344 C14orf93Q9H972 538 aaKnown RBP23.2■■□□□ 1.3
CD4-212ENST00000544344 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
CD4-212ENST00000544344 PSME1Q06323 249 aa23.17■■□□□ 1.3
CD4-212ENST00000544344 LRP5O75197 1615 aa23.15■■□□□ 1.3
CD4-212ENST00000544344 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
CD4-212ENST00000544344 HAP1P54257 671 aaPredicted RBP23.15■■□□□ 1.3
CD4-212ENST00000544344 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
CD4-212ENST00000544344 NRAPQ86VF7 1730 aa23.15■■□□□ 1.3
CD4-212ENST00000544344 PLEKHG5O94827 1062 aa23.14■■□□□ 1.29
CD4-212ENST00000544344 KRT27Q7Z3Y8 459 aa23.14■■□□□ 1.29
CD4-212ENST00000544344 ARHGEF10O15013 1369 aa23.14■■□□□ 1.29
CD4-212ENST00000544344 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
CD4-212ENST00000544344 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
CD4-212ENST00000544344 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
CD4-212ENST00000544344 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
CD4-212ENST00000544344 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
CD4-212ENST00000544344 CCDC9Q9Y3X0 531 aaKnown RBP23.11■■□□□ 1.29
CD4-212ENST00000544344 DLC1Q96QB1 1528 aa23.11■■□□□ 1.29
CD4-212ENST00000544344 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
CD4-212ENST00000544344 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
CD4-212ENST00000544344 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
CD4-212ENST00000544344 PMFBP1Q8TBY8 1022 aa23.09■■□□□ 1.29
CD4-212ENST00000544344 ALS2Q96Q42 1657 aa23.09■■□□□ 1.29
CD4-212ENST00000544344 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
CD4-212ENST00000544344 CRYBG1Q9Y4K1 1723 aa23.05■■□□□ 1.28
CD4-212ENST00000544344 COL14A1Q05707 1796 aaKnown RBP23.05■■□□□ 1.28
CD4-212ENST00000544344 FAM98CQ17RN3 349 aaKnown RBP23.05■■□□□ 1.28
CD4-212ENST00000544344 BTG4Q9NY30 223 aa23.05■■□□□ 1.28
CD4-212ENST00000544344 PSDA5PKW4 1024 aaPredicted RBP23.04■■□□□ 1.28
CD4-212ENST00000544344 PRR36Q9H6K5 1346 aa23.04■■□□□ 1.28
CD4-212ENST00000544344 BAG6P46379 1132 aa23.03■■□□□ 1.28
CD4-212ENST00000544344 HRCP23327 699 aa23.02■■□□□ 1.28
CD4-212ENST00000544344 POGKQ9P215 609 aa23.02■■□□□ 1.28
CD4-212ENST00000544344 RGPD1P0DJD0 1748 aa23.02■■□□□ 1.28
CD4-212ENST00000544344 THSD7AQ9UPZ6 1657 aa23.01■■□□□ 1.27
CD4-212ENST00000544344 A0A0G2JS52 829 aa23.01■■□□□ 1.27
CD4-212ENST00000544344 MYT1Q01538 1121 aa23.01■■□□□ 1.27
CD4-212ENST00000544344 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
CD4-212ENST00000544344 SPATA31A5Q5VU36 1347 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms