RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
C2CD3-220ENST00000544293 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
C2CD3-220ENST00000544293 FOXO3O43524 673 aa14.51□□□□□ -0.09
C2CD3-220ENST00000544293 XPCQ01831 940 aaPredicted RBP14.51□□□□□ -0.09
C2CD3-220ENST00000544293 NALCNQ8IZF0 1738 aa14.5□□□□□ -0.09
C2CD3-220ENST00000544293 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
C2CD3-220ENST00000544293 CLTCL1P53675 1640 aa14.5□□□□□ -0.09
C2CD3-220ENST00000544293 CCDC125Q86Z20 511 aa14.49□□□□□ -0.09
C2CD3-220ENST00000544293 PXDNQ92626 1479 aa14.49□□□□□ -0.09
C2CD3-220ENST00000544293 RPGRIP1LQ68CZ1 1315 aa14.48□□□□□ -0.09
C2CD3-220ENST00000544293 WAPLQ7Z5K2 1190 aa14.48□□□□□ -0.09
C2CD3-220ENST00000544293 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
C2CD3-220ENST00000544293 HFM1A2PYH4 1435 aa14.47□□□□□ -0.09
C2CD3-220ENST00000544293 ADGRF5Q8IZF2 1346 aa14.46□□□□□ -0.09
C2CD3-220ENST00000544293 NUTM2FA1L443 756 aa14.46□□□□□ -0.09
C2CD3-220ENST00000544293 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
C2CD3-220ENST00000544293 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
C2CD3-220ENST00000544293 NAIPQ13075 1403 aa14.46□□□□□ -0.09
C2CD3-220ENST00000544293 PLEKHH1Q9ULM0 1364 aa14.45□□□□□ -0.1
C2CD3-220ENST00000544293 COL22A1Q8NFW1 1626 aaPredicted RBP14.44□□□□□ -0.1
C2CD3-220ENST00000544293 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
C2CD3-220ENST00000544293 SPATA31A3Q5VYP0 1347 aa14.43□□□□□ -0.1
C2CD3-220ENST00000544293 EP400Q96L91 3159 aa14.43□□□□□ -0.1
C2CD3-220ENST00000544293 SLIT2O94813 1529 aa14.43□□□□□ -0.1
C2CD3-220ENST00000544293 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
C2CD3-220ENST00000544293 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
C2CD3-220ENST00000544293 STK26Q9P289 416 aa14.42□□□□□ -0.1
C2CD3-220ENST00000544293 RALGAPBQ86X10 1494 aa14.42□□□□□ -0.1
C2CD3-220ENST00000544293 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
C2CD3-220ENST00000544293 SEPT12Q8IYM1 358 aa14.4□□□□□ -0.1
C2CD3-220ENST00000544293 CABLES1Q8TDN4 633 aa14.4□□□□□ -0.1
C2CD3-220ENST00000544293 TECPR2O15040 1411 aa14.4□□□□□ -0.1
C2CD3-220ENST00000544293 BLMP54132 1417 aaPredicted RBP14.4□□□□□ -0.1
C2CD3-220ENST00000544293 LRPPRCP42704 1394 aaKnown RBP14.39□□□□□ -0.11
C2CD3-220ENST00000544293 KRT28Q7Z3Y7 464 aa14.39□□□□□ -0.11
C2CD3-220ENST00000544293 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
C2CD3-220ENST00000544293 GLI3P10071 1580 aa14.39□□□□□ -0.11
C2CD3-220ENST00000544293 VPS72Q15906 364 aa14.38□□□□□ -0.11
C2CD3-220ENST00000544293 RRBP1Q9P2E9 1410 aaKnown RBP14.38□□□□□ -0.11
C2CD3-220ENST00000544293 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
C2CD3-220ENST00000544293 CDC42BPGQ6DT37 1551 aa14.37□□□□□ -0.11
C2CD3-220ENST00000544293 SPATA31E1Q6ZUB1 1445 aa14.36□□□□□ -0.11
C2CD3-220ENST00000544293 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
C2CD3-220ENST00000544293 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
C2CD3-220ENST00000544293 KRT27Q7Z3Y8 459 aa14.33□□□□□ -0.12
C2CD3-220ENST00000544293 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
C2CD3-220ENST00000544293 C14orf93Q9H972 538 aaKnown RBP14.32□□□□□ -0.12
C2CD3-220ENST00000544293 PSDA5PKW4 1024 aaPredicted RBP14.31□□□□□ -0.12
C2CD3-220ENST00000544293 HRCP23327 699 aa14.31□□□□□ -0.12
C2CD3-220ENST00000544293 PIK3C2GO75747 1445 aa14.31□□□□□ -0.12
C2CD3-220ENST00000544293 YTHDC2Q9H6S0 1430 aaKnown RBP14.31□□□□□ -0.12
C2CD3-220ENST00000544293 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
C2CD3-220ENST00000544293 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
C2CD3-220ENST00000544293 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
C2CD3-220ENST00000544293 CFAP70Q5T0N1 1121 aa14.29□□□□□ -0.12
C2CD3-220ENST00000544293 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
C2CD3-220ENST00000544293 SBNO1A3KN83 1393 aa14.29□□□□□ -0.12
C2CD3-220ENST00000544293 TNS3Q68CZ2 1445 aa14.29□□□□□ -0.12
C2CD3-220ENST00000544293 KIF1BO60333 1816 aa14.29□□□□□ -0.12
C2CD3-220ENST00000544293 PSME1Q06323 249 aa14.28□□□□□ -0.12
C2CD3-220ENST00000544293 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
C2CD3-220ENST00000544293 PPLO60437 1756 aa14.27□□□□□ -0.12
C2CD3-220ENST00000544293 EN1Q05925 392 aaPredicted RBP14.27□□□□□ -0.13
C2CD3-220ENST00000544293 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
C2CD3-220ENST00000544293 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.13
C2CD3-220ENST00000544293 PMFBP1Q8TBY8 1022 aa14.27□□□□□ -0.13
C2CD3-220ENST00000544293 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.27□□□□□ -0.13
C2CD3-220ENST00000544293 PRAM1Q96QH2 718 aa14.26□□□□□ -0.13
C2CD3-220ENST00000544293 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
C2CD3-220ENST00000544293 USP32Q8NFA0 1604 aa14.26□□□□□ -0.13
C2CD3-220ENST00000544293 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
C2CD3-220ENST00000544293 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
C2CD3-220ENST00000544293 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
C2CD3-220ENST00000544293 BTG4Q9NY30 223 aa14.25□□□□□ -0.13
C2CD3-220ENST00000544293 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
C2CD3-220ENST00000544293 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
C2CD3-220ENST00000544293 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
C2CD3-220ENST00000544293 BAG6P46379 1132 aa14.23□□□□□ -0.13
C2CD3-220ENST00000544293 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
C2CD3-220ENST00000544293 SPATA31A5Q5VU36 1347 aa14.22□□□□□ -0.13
C2CD3-220ENST00000544293 SPATA31A7Q8IWB4 1347 aa14.22□□□□□ -0.13
C2CD3-220ENST00000544293 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
C2CD3-220ENST00000544293 BRWD3Q6RI45 1802 aa14.22□□□□□ -0.13
C2CD3-220ENST00000544293 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
C2CD3-220ENST00000544293 R3HDM1Q15032 1099 aaKnown RBP14.21□□□□□ -0.13
C2CD3-220ENST00000544293 EZH2Q15910 746 aaKnown RBP14.21□□□□□ -0.13
C2CD3-220ENST00000544293 CAMKK2Q96RR4 588 aa14.21□□□□□ -0.13
C2CD3-220ENST00000544293 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.14
C2CD3-220ENST00000544293 LRP5O75197 1615 aa14.19□□□□□ -0.14
C2CD3-220ENST00000544293 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
C2CD3-220ENST00000544293 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
C2CD3-220ENST00000544293 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
C2CD3-220ENST00000544293 DISP2A7MBM2 1401 aa14.17□□□□□ -0.14
C2CD3-220ENST00000544293 ANKARQ7Z5J8 1434 aa14.17□□□□□ -0.14
C2CD3-220ENST00000544293 A0A0G2JS52 829 aa14.17□□□□□ -0.14
C2CD3-220ENST00000544293 MYT1Q01538 1121 aa14.17□□□□□ -0.14
C2CD3-220ENST00000544293 KNDC1Q76NI1 1749 aa14.17□□□□□ -0.14
C2CD3-220ENST00000544293 POGKQ9P215 609 aa14.16□□□□□ -0.14
C2CD3-220ENST00000544293 TRAK1Q9UPV9 953 aa14.16□□□□□ -0.14
C2CD3-220ENST00000544293 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms