RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 E9PSI1 815 aa18.11■□□□□ 0.49
LSM14A-203ENST00000544216 PDE4AP27815 886 aa18.11■□□□□ 0.49
LSM14A-203ENST00000544216 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
LSM14A-203ENST00000544216 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
LSM14A-203ENST00000544216 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.49
LSM14A-203ENST00000544216 PRAM1Q96QH2 718 aa18.1■□□□□ 0.49
LSM14A-203ENST00000544216 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
LSM14A-203ENST00000544216 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
LSM14A-203ENST00000544216 NEURL4Q96JN8 1562 aa18.09■□□□□ 0.49
LSM14A-203ENST00000544216 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
LSM14A-203ENST00000544216 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
LSM14A-203ENST00000544216 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
LSM14A-203ENST00000544216 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
LSM14A-203ENST00000544216 NBR1Q14596 966 aa18.08■□□□□ 0.49
LSM14A-203ENST00000544216 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
LSM14A-203ENST00000544216 IPO9Q96P70 1041 aaKnown RBP18.07■□□□□ 0.48
LSM14A-203ENST00000544216 RGS3P49796 1198 aa18.06■□□□□ 0.48
LSM14A-203ENST00000544216 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
LSM14A-203ENST00000544216 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
LSM14A-203ENST00000544216 DIP2CQ9Y2E4 1556 aa18.05■□□□□ 0.48
LSM14A-203ENST00000544216 BCL2L13Q9BXK5 485 aa18.05■□□□□ 0.48
LSM14A-203ENST00000544216 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
LSM14A-203ENST00000544216 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
LSM14A-203ENST00000544216 CAMSAP1Q5T5Y3 1602 aa18.03■□□□□ 0.48
LSM14A-203ENST00000544216 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
LSM14A-203ENST00000544216 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
LSM14A-203ENST00000544216 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
LSM14A-203ENST00000544216 PPLO60437 1756 aa18.03■□□□□ 0.48
LSM14A-203ENST00000544216 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
LSM14A-203ENST00000544216 NKTRP30414 1462 aaKnown RBP18.02■□□□□ 0.48
LSM14A-203ENST00000544216 PANK1Q8TE04 598 aa18.02■□□□□ 0.47
LSM14A-203ENST00000544216 TERF2IPQ9NYB0 399 aa18.01■□□□□ 0.47
LSM14A-203ENST00000544216 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
LSM14A-203ENST00000544216 QRICH2Q9H0J4 1663 aa18.01■□□□□ 0.47
LSM14A-203ENST00000544216 SIGLEC1Q9BZZ2 1709 aa18.01■□□□□ 0.47
LSM14A-203ENST00000544216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.01■□□□□ 0.47
LSM14A-203ENST00000544216 ANKRD36BQ8N2N9 1353 aa18■□□□□ 0.47
LSM14A-203ENST00000544216 MS4A1P11836 297 aa18■□□□□ 0.47
LSM14A-203ENST00000544216 CENPQQ7L2Z9 268 aaPredicted RBP18■□□□□ 0.47
LSM14A-203ENST00000544216 WAPLQ7Z5K2 1190 aa18■□□□□ 0.47
LSM14A-203ENST00000544216 CDK19Q9BWU1 502 aa18■□□□□ 0.47
LSM14A-203ENST00000544216 CABP1Q9NZU7 370 aa18■□□□□ 0.47
LSM14A-203ENST00000544216 NGEFQ8N5V2 710 aa18■□□□□ 0.47
LSM14A-203ENST00000544216 GLI2P10070 1586 aa17.99■□□□□ 0.47
LSM14A-203ENST00000544216 CLUAP1Q96AJ1 413 aa17.99■□□□□ 0.47
LSM14A-203ENST00000544216 A0A1W2PP64 1363 aa17.98■□□□□ 0.47
LSM14A-203ENST00000544216 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
LSM14A-203ENST00000544216 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
LSM14A-203ENST00000544216 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
LSM14A-203ENST00000544216 FBLN1P23142 703 aa17.97■□□□□ 0.47
LSM14A-203ENST00000544216 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
LSM14A-203ENST00000544216 MYO3AQ8NEV4 1616 aa17.96■□□□□ 0.47
LSM14A-203ENST00000544216 FYB1O15117 783 aa17.96■□□□□ 0.47
LSM14A-203ENST00000544216 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
LSM14A-203ENST00000544216 TSPOAP1O95153 1857 aa17.95■□□□□ 0.46
LSM14A-203ENST00000544216 PUS7Q96PZ0 661 aaKnown RBP17.95■□□□□ 0.46
LSM14A-203ENST00000544216 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
LSM14A-203ENST00000544216 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
LSM14A-203ENST00000544216 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
LSM14A-203ENST00000544216 TSR2Q969E8 191 aaKnown RBP17.93■□□□□ 0.46
LSM14A-203ENST00000544216 TNNQ9UQP3 1299 aa17.93■□□□□ 0.46
LSM14A-203ENST00000544216 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
LSM14A-203ENST00000544216 PIK3C2BO00750 1634 aa17.93■□□□□ 0.46
LSM14A-203ENST00000544216 RARSP54136 660 aaKnown RBP17.92■□□□□ 0.46
LSM14A-203ENST00000544216 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
LSM14A-203ENST00000544216 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
LSM14A-203ENST00000544216 MYH16Q9H6N6 1097 aa17.91■□□□□ 0.46
LSM14A-203ENST00000544216 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
LSM14A-203ENST00000544216 IGHDP01880 384 aa17.91■□□□□ 0.46
LSM14A-203ENST00000544216 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
LSM14A-203ENST00000544216 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
LSM14A-203ENST00000544216 NSD2O96028 1365 aa17.89■□□□□ 0.46
LSM14A-203ENST00000544216 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
LSM14A-203ENST00000544216 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
LSM14A-203ENST00000544216 ABCC11Q96J66 1382 aa17.88■□□□□ 0.45
LSM14A-203ENST00000544216 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
LSM14A-203ENST00000544216 MYO5BQ9ULV0 1848 aa17.87■□□□□ 0.45
LSM14A-203ENST00000544216 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
LSM14A-203ENST00000544216 RLBP1P12271 317 aa17.87■□□□□ 0.45
LSM14A-203ENST00000544216 RIPK4P57078 832 aa17.87■□□□□ 0.45
LSM14A-203ENST00000544216 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
LSM14A-203ENST00000544216 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
LSM14A-203ENST00000544216 SLC4A3P48751 1232 aa17.87■□□□□ 0.45
LSM14A-203ENST00000544216 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
LSM14A-203ENST00000544216 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
LSM14A-203ENST00000544216 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
LSM14A-203ENST00000544216 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
LSM14A-203ENST00000544216 ZC3H13Q5T200 1668 aaKnown RBP17.85■□□□□ 0.45
LSM14A-203ENST00000544216 NEFMP07197 916 aa17.85■□□□□ 0.45
LSM14A-203ENST00000544216 SMC4Q9NTJ3 1288 aa17.85■□□□□ 0.45
LSM14A-203ENST00000544216 NCKAP5LQ9HCH0 1330 aa17.85■□□□□ 0.45
LSM14A-203ENST00000544216 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
LSM14A-203ENST00000544216 HMOX1P09601 288 aa17.85■□□□□ 0.45
LSM14A-203ENST00000544216 PTPRMP28827 1452 aa17.84■□□□□ 0.45
LSM14A-203ENST00000544216 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
LSM14A-203ENST00000544216 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
LSM14A-203ENST00000544216 TMEM131LA2VDJ0 1609 aa17.84■□□□□ 0.45
LSM14A-203ENST00000544216 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
LSM14A-203ENST00000544216 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
LSM14A-203ENST00000544216 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms