RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
LDHB-210ENST00000544151 CFAP70Q5T0N1 1121 aa22.9■■□□□ 1.26
LDHB-210ENST00000544151 WAPLQ7Z5K2 1190 aa22.89■■□□□ 1.25
LDHB-210ENST00000544151 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
LDHB-210ENST00000544151 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
LDHB-210ENST00000544151 DDX17Q92841 729 aaKnown RBP22.88■■□□□ 1.25
LDHB-210ENST00000544151 DHX57Q6P158 1386 aaKnown RBP22.88■■□□□ 1.25
LDHB-210ENST00000544151 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
LDHB-210ENST00000544151 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
LDHB-210ENST00000544151 RGS17Q9UGC6 210 aaPredicted RBP22.85■■□□□ 1.25
LDHB-210ENST00000544151 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
LDHB-210ENST00000544151 ORAI2Q96SN7 254 aa22.84■■□□□ 1.25
LDHB-210ENST00000544151 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
LDHB-210ENST00000544151 KIF1AQ12756 1690 aa22.83■■□□□ 1.24
LDHB-210ENST00000544151 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
LDHB-210ENST00000544151 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
LDHB-210ENST00000544151 ADGRB2O60241 1585 aa22.8■■□□□ 1.24
LDHB-210ENST00000544151 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
LDHB-210ENST00000544151 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
LDHB-210ENST00000544151 LRRC59Q96AG4 307 aaKnown RBP22.8■■□□□ 1.24
LDHB-210ENST00000544151 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
LDHB-210ENST00000544151 KIAA1210Q9ULL0 1709 aa22.79■■□□□ 1.24
LDHB-210ENST00000544151 SAFB2Q14151 953 aaKnown RBP eCLIP22.78■■□□□ 1.24
LDHB-210ENST00000544151 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
LDHB-210ENST00000544151 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
LDHB-210ENST00000544151 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
LDHB-210ENST00000544151 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
LDHB-210ENST00000544151 SIRT1Q96EB6 747 aa22.77■■□□□ 1.24
LDHB-210ENST00000544151 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
LDHB-210ENST00000544151 COL22A1Q8NFW1 1626 aaPredicted RBP22.76■■□□□ 1.23
LDHB-210ENST00000544151 PXDNQ92626 1479 aa22.76■■□□□ 1.23
LDHB-210ENST00000544151 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
LDHB-210ENST00000544151 MSH5O43196 834 aa22.75■■□□□ 1.23
LDHB-210ENST00000544151 POTEAQ6S8J7 498 aa22.75■■□□□ 1.23
LDHB-210ENST00000544151 NPHP3Q7Z494 1330 aa22.75■■□□□ 1.23
LDHB-210ENST00000544151 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
LDHB-210ENST00000544151 POGKQ9P215 609 aa22.74■■□□□ 1.23
LDHB-210ENST00000544151 TRAK1Q9UPV9 953 aa22.74■■□□□ 1.23
LDHB-210ENST00000544151 FOXO3O43524 673 aa22.69■■□□□ 1.22
LDHB-210ENST00000544151 XPCQ01831 940 aaPredicted RBP22.69■■□□□ 1.22
LDHB-210ENST00000544151 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
LDHB-210ENST00000544151 ANKARQ7Z5J8 1434 aa22.67■■□□□ 1.22
LDHB-210ENST00000544151 ZNF772Q68DY9 489 aaPredicted RBP22.67■■□□□ 1.22
LDHB-210ENST00000544151 HIRIP3Q9BW71 556 aaPredicted RBP22.67■■□□□ 1.22
LDHB-210ENST00000544151 ITSN1Q15811 1721 aa22.67■■□□□ 1.22
LDHB-210ENST00000544151 TULP4Q9NRJ4 1543 aa22.67■■□□□ 1.22
LDHB-210ENST00000544151 MINK1Q8N4C8 1332 aaPredicted RBP22.66■■□□□ 1.22
LDHB-210ENST00000544151 C8orf37Q96NL8 207 aa22.65■■□□□ 1.22
LDHB-210ENST00000544151 AFF2P51816 1311 aa22.64■■□□□ 1.22
LDHB-210ENST00000544151 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
LDHB-210ENST00000544151 ADAMTS2O95450 1211 aa22.63■■□□□ 1.21
LDHB-210ENST00000544151 PHF8Q9UPP1 1060 aa22.63■■□□□ 1.21
LDHB-210ENST00000544151 TRPM1Q7Z4N2 1603 aa22.62■■□□□ 1.21
LDHB-210ENST00000544151 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
LDHB-210ENST00000544151 ABCA3Q99758 1704 aa22.61■■□□□ 1.21
LDHB-210ENST00000544151 TNS3Q68CZ2 1445 aa22.6■■□□□ 1.21
LDHB-210ENST00000544151 QRICH2Q9H0J4 1663 aa22.6■■□□□ 1.21
LDHB-210ENST00000544151 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
LDHB-210ENST00000544151 TOPAZ1Q8N9V7 1692 aa22.58■■□□□ 1.21
LDHB-210ENST00000544151 NEUROD1Q13562 356 aa22.58■■□□□ 1.21
LDHB-210ENST00000544151 L3MBTL2Q969R5 705 aa22.58■■□□□ 1.21
LDHB-210ENST00000544151 ATP7BP35670 1465 aa22.58■■□□□ 1.2
LDHB-210ENST00000544151 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
LDHB-210ENST00000544151 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
LDHB-210ENST00000544151 NBPF1Q3BBV0 1214 aa22.57■■□□□ 1.2
LDHB-210ENST00000544151 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
LDHB-210ENST00000544151 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
LDHB-210ENST00000544151 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
LDHB-210ENST00000544151 PMFBP1Q8TBY8 1022 aa22.56■■□□□ 1.2
LDHB-210ENST00000544151 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
LDHB-210ENST00000544151 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
LDHB-210ENST00000544151 SBNO1A3KN83 1393 aa22.53■■□□□ 1.2
LDHB-210ENST00000544151 PSME1Q06323 249 aa22.53■■□□□ 1.2
LDHB-210ENST00000544151 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.52■■□□□ 1.2
LDHB-210ENST00000544151 RXRBP28702 533 aa22.52■■□□□ 1.2
LDHB-210ENST00000544151 CDK12Q9NYV4 1490 aaPredicted RBP22.52■■□□□ 1.2
LDHB-210ENST00000544151 PLCH1Q4KWH8 1693 aa22.5■■□□□ 1.19
LDHB-210ENST00000544151 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
LDHB-210ENST00000544151 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
LDHB-210ENST00000544151 LMOD2Q6P5Q4 547 aa22.49■■□□□ 1.19
LDHB-210ENST00000544151 USP21Q9UK80 565 aa22.49■■□□□ 1.19
LDHB-210ENST00000544151 RGS12O14924 1447 aa22.48■■□□□ 1.19
LDHB-210ENST00000544151 QTRT2Q9H974 415 aaKnown RBP22.48■■□□□ 1.19
LDHB-210ENST00000544151 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
LDHB-210ENST00000544151 ROCK2O75116 1388 aaKnown RBP22.48■■□□□ 1.19
LDHB-210ENST00000544151 CRYBG1Q9Y4K1 1723 aa22.48■■□□□ 1.19
LDHB-210ENST00000544151 PLEKHG5O94827 1062 aa22.47■■□□□ 1.19
LDHB-210ENST00000544151 HAP1P54257 671 aaPredicted RBP22.47■■□□□ 1.19
LDHB-210ENST00000544151 FNBP4Q8N3X1 1017 aaPredicted RBP22.46■■□□□ 1.19
LDHB-210ENST00000544151 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
LDHB-210ENST00000544151 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
LDHB-210ENST00000544151 CDK19Q9BWU1 502 aa22.46■■□□□ 1.19
LDHB-210ENST00000544151 RBM6P78332 1123 aaKnown RBP22.45■■□□□ 1.18
LDHB-210ENST00000544151 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.18
LDHB-210ENST00000544151 ATRNO75882 1429 aa22.44■■□□□ 1.18
LDHB-210ENST00000544151 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
LDHB-210ENST00000544151 TONSLQ96HA7 1378 aa22.44■■□□□ 1.18
LDHB-210ENST00000544151 CABLES1Q8TDN4 633 aa22.43■■□□□ 1.18
LDHB-210ENST00000544151 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
LDHB-210ENST00000544151 SLIT2O94813 1529 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms