RNA–Protein interactions for RNA: ENST00000544057.1

PHOX2A-202, Transcript of paired like homeobox 2A, humanhuman

TSL 3

Gene PHOX2A, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-202ENST00000544057 PRAM1Q96QH2 718 aa42.14■■■■■ 4.34
PHOX2A-202ENST00000544057 PLEKHH1Q9ULM0 1364 aa42.14■■■■■ 4.34
PHOX2A-202ENST00000544057 MST1RQ04912 1400 aa42.12■■■■■ 4.33
PHOX2A-202ENST00000544057 NBPF1Q3BBV0 1214 aa42.09■■■■■ 4.33
PHOX2A-202ENST00000544057 CDC42BPGQ6DT37 1551 aa42.09■■■■■ 4.33
PHOX2A-202ENST00000544057 CCER1Q8TC90 406 aaPredicted RBP42.04■■■■■ 4.32
PHOX2A-202ENST00000544057 SAFB2Q14151 953 aaKnown RBP eCLIP42.02■■■■■ 4.32
PHOX2A-202ENST00000544057 BRINP3Q76B58 766 aa42.02■■■■■ 4.32
PHOX2A-202ENST00000544057 TIMELESSQ9UNS1 1208 aa42.02■■■■■ 4.32
PHOX2A-202ENST00000544057 C1orf167Q5SNV9 1468 aa42.02■■■■■ 4.32
PHOX2A-202ENST00000544057 TRPM1Q7Z4N2 1603 aa42.01■■■■■ 4.32
PHOX2A-202ENST00000544057 ARHGEF28Q8N1W1 1705 aaKnown RBP41.98■■■■■ 4.31
PHOX2A-202ENST00000544057 ROCK2O75116 1388 aaKnown RBP41.97■■■■■ 4.31
PHOX2A-202ENST00000544057 NBPF8Q3BBV2 869 aa41.96■■■■■ 4.31
PHOX2A-202ENST00000544057 PHLPP1O60346 1717 aa41.92■■■■■ 4.3
PHOX2A-202ENST00000544057 AHDC1Q5TGY3 1603 aaPredicted RBP41.91■■■■■ 4.3
PHOX2A-202ENST00000544057 ADGRB2O60241 1585 aa41.9■■■■■ 4.3
PHOX2A-202ENST00000544057 FMN2Q9NZ56 1722 aa41.89■■■■■ 4.3
PHOX2A-202ENST00000544057 MINK1Q8N4C8 1332 aaPredicted RBP41.89■■■■■ 4.3
PHOX2A-202ENST00000544057 EIF3AQ14152 1382 aaKnown RBP41.87■■■■■ 4.29
PHOX2A-202ENST00000544057 GPRASP1Q5JY77 1395 aa41.87■■■■■ 4.29
PHOX2A-202ENST00000544057 ESCO1Q5FWF5 840 aa41.86■■■■■ 4.29
PHOX2A-202ENST00000544057 ORAI2Q96SN7 254 aa41.86■■■■■ 4.29
PHOX2A-202ENST00000544057 HIRIP3Q9BW71 556 aaPredicted RBP41.84■■■■■ 4.29
PHOX2A-202ENST00000544057 CENPJQ9HC77 1338 aaPredicted RBP41.84■■■■■ 4.29
PHOX2A-202ENST00000544057 NUTM2FA1L443 756 aa41.83■■■■■ 4.29
PHOX2A-202ENST00000544057 RALGAPBQ86X10 1494 aa41.83■■■■■ 4.29
PHOX2A-202ENST00000544057 WASLO00401 505 aaPredicted RBP41.82■■■■■ 4.29
PHOX2A-202ENST00000544057 NHSL1Q5SYE7 1610 aa41.8■■■■■ 4.28
PHOX2A-202ENST00000544057 CARD11Q9BXL7 1154 aa41.8■■■■■ 4.28
PHOX2A-202ENST00000544057 ANKARQ7Z5J8 1434 aa41.79■■■■■ 4.28
PHOX2A-202ENST00000544057 COL16A1Q07092 1604 aaPredicted RBP41.78■■■■■ 4.28
PHOX2A-202ENST00000544057 JCADQ9P266 1359 aa41.76■■■■■ 4.27
PHOX2A-202ENST00000544057 NPHP3Q7Z494 1330 aa41.74■■■■■ 4.27
PHOX2A-202ENST00000544057 LRRC59Q96AG4 307 aaKnown RBP41.73■■■■■ 4.27
PHOX2A-202ENST00000544057 KIF1AQ12756 1690 aa41.71■■■■■ 4.27
PHOX2A-202ENST00000544057 TULP4Q9NRJ4 1543 aa41.7■■■■■ 4.27
PHOX2A-202ENST00000544057 PHF8Q9UPP1 1060 aa41.7■■■■■ 4.27
PHOX2A-202ENST00000544057 RGPD8O14715 1765 aaPredicted RBP41.7■■■■■ 4.27
PHOX2A-202ENST00000544057 DDX17Q92841 729 aaKnown RBP41.69■■■■■ 4.26
PHOX2A-202ENST00000544057 SOS2Q07890 1332 aaPredicted RBP41.69■■■■■ 4.26
PHOX2A-202ENST00000544057 CDK19Q9BWU1 502 aa41.68■■■■■ 4.26
PHOX2A-202ENST00000544057 QRICH2Q9H0J4 1663 aa41.68■■■■■ 4.26
PHOX2A-202ENST00000544057 FOXO3O43524 673 aa41.66■■■■■ 4.26
PHOX2A-202ENST00000544057 USP32Q8NFA0 1604 aa41.63■■■■■ 4.26
PHOX2A-202ENST00000544057 NUDT16Q96DE0 195 aaKnown RBP41.61■■■■■ 4.25
PHOX2A-202ENST00000544057 SPATA31A6Q5VVP1 1343 aa41.6■■■■■ 4.25
PHOX2A-202ENST00000544057 PRR36Q9H6K5 1346 aa41.6■■■■■ 4.25
PHOX2A-202ENST00000544057 EVC2Q86UK5 1308 aa41.59■■■■■ 4.25
PHOX2A-202ENST00000544057 SHPRHQ149N8 1683 aa41.58■■■■■ 4.25
PHOX2A-202ENST00000544057 SRPK2P78362 688 aaKnown RBP41.57■■■■■ 4.25
PHOX2A-202ENST00000544057 ITSN1Q15811 1721 aa41.56■■■■■ 4.24
PHOX2A-202ENST00000544057 PSME1Q06323 249 aa41.56■■■■■ 4.24
PHOX2A-202ENST00000544057 CCDC61Q9Y6R9 512 aa41.56■■■■■ 4.24
PHOX2A-202ENST00000544057 MED1Q15648 1581 aaPredicted RBP41.55■■■■■ 4.24
PHOX2A-202ENST00000544057 SBNO2Q9Y2G9 1366 aa41.55■■■■■ 4.24
PHOX2A-202ENST00000544057 ATP7BP35670 1465 aa41.54■■■■■ 4.24
PHOX2A-202ENST00000544057 PXDNQ92626 1479 aa41.54■■■■■ 4.24
PHOX2A-202ENST00000544057 PMFBP1Q8TBY8 1022 aa41.54■■■■■ 4.24
PHOX2A-202ENST00000544057 KRT28Q7Z3Y7 464 aa41.53■■■■■ 4.24
PHOX2A-202ENST00000544057 SLC24A1O60721 1099 aa41.52■■■■■ 4.24
PHOX2A-202ENST00000544057 DISP3Q9P2K9 1392 aa41.5■■■■■ 4.23
PHOX2A-202ENST00000544057 XPCQ01831 940 aaPredicted RBP41.49■■■■■ 4.23
PHOX2A-202ENST00000544057 NGDNQ8NEJ9 315 aaKnown RBP41.49■■■■■ 4.23
PHOX2A-202ENST00000544057 PNPLA6Q8IY17 1366 aa41.49■■■■■ 4.23
PHOX2A-202ENST00000544057 CABP2Q9NPB3 220 aa41.48■■■■■ 4.23
PHOX2A-202ENST00000544057 PLEKHG3A1L390 1219 aa41.44■■■■■ 4.22
PHOX2A-202ENST00000544057 SBNO1A3KN83 1393 aa41.43■■■■■ 4.22
PHOX2A-202ENST00000544057 PHF23Q9BUL5 403 aaPredicted RBP41.42■■■■■ 4.22
PHOX2A-202ENST00000544057 TOPAZ1Q8N9V7 1692 aa41.42■■■■■ 4.22
PHOX2A-202ENST00000544057 SPATA31A3Q5VYP0 1347 aa41.42■■■■■ 4.22
PHOX2A-202ENST00000544057 ST20-MTHFSA0A0A6YYL1 179 aa41.4■■■■■ 4.22
PHOX2A-202ENST00000544057 USP47Q96K76 1375 aa41.39■■■■■ 4.22
PHOX2A-202ENST00000544057 PPIP5K1Q6PFW1 1433 aa41.37■■■■■ 4.21
PHOX2A-202ENST00000544057 POLR3AO14802 1390 aaPredicted RBP41.37■■■■■ 4.21
PHOX2A-202ENST00000544057 NUTM2BA6NNL0 878 aaPredicted RBP41.36■■■■■ 4.21
PHOX2A-202ENST00000544057 NUTM2EB1AL46 878 aaPredicted RBP41.36■■■■■ 4.21
PHOX2A-202ENST00000544057 NUTM2AQ8IVF1 878 aaPredicted RBP41.36■■■■■ 4.21
PHOX2A-202ENST00000544057 ATAD2Q6PL18 1390 aa41.36■■■■■ 4.21
PHOX2A-202ENST00000544057 TNS3Q68CZ2 1445 aa41.35■■■■■ 4.21
PHOX2A-202ENST00000544057 MEX3CQ5U5Q3 659 aaKnown RBP41.35■■■■■ 4.21
PHOX2A-202ENST00000544057 COL22A1Q8NFW1 1626 aaPredicted RBP41.34■■■■■ 4.21
PHOX2A-202ENST00000544057 ACEP12821 1306 aa41.34■■■■■ 4.21
PHOX2A-202ENST00000544057 PUS7Q96PZ0 661 aaKnown RBP41.33■■■■■ 4.21
PHOX2A-202ENST00000544057 ARHGEF10O15013 1369 aa41.33■■■■■ 4.21
PHOX2A-202ENST00000544057 TESK2Q96S53 571 aa41.32■■■■■ 4.21
PHOX2A-202ENST00000544057 CABP1Q9NZU7 370 aa41.31■■■■■ 4.2
PHOX2A-202ENST00000544057 LRP6O75581 1613 aa41.3■■■■■ 4.2
PHOX2A-202ENST00000544057 LMOD2Q6P5Q4 547 aa41.27■■■■■ 4.2
PHOX2A-202ENST00000544057 TRPM3Q9HCF6 1732 aaPredicted RBP41.26■■■■■ 4.2
PHOX2A-202ENST00000544057 PAK3O75914 559 aaPredicted RBP41.25■■■■■ 4.19
PHOX2A-202ENST00000544057 BRD4O60885 1362 aaPredicted RBP41.25■■■■■ 4.19
PHOX2A-202ENST00000544057 TMF1P82094 1093 aa41.22■■■■■ 4.19
PHOX2A-202ENST00000544057 ZNF692Q9BU19 519 aaPredicted RBP41.22■■■■■ 4.19
PHOX2A-202ENST00000544057 CDCA8Q53HL2 280 aa41.18■■■■■ 4.18
PHOX2A-202ENST00000544057 ALS2Q96Q42 1657 aa41.17■■■■■ 4.18
PHOX2A-202ENST00000544057 ADAMTS2O95450 1211 aa41.17■■■■■ 4.18
PHOX2A-202ENST00000544057 EIF4G2P78344 907 aaKnown RBP eCLIP41.17■■■■■ 4.18
PHOX2A-202ENST00000544057 HAP1P54257 671 aaPredicted RBP41.15■■■■■ 4.18
PHOX2A-202ENST00000544057 ZNF772Q68DY9 489 aaPredicted RBP41.13■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms