RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CAVIN1Q6NZI2 390 aaKnown RBP23.66■■□□□ 1.38
SUDS3-204ENST00000543473 RNF214Q8ND24 703 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 GRPEL1Q9HAV7 217 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 CCDC173Q0VFZ6 552 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 CCDC39Q9UFE4 941 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 ZNF592Q92610 1267 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 MCM4P33991 863 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
SUDS3-204ENST00000543473 CDC45O75419 566 aa23.63■■□□□ 1.37
SUDS3-204ENST00000543473 ANO2Q9NQ90 1003 aa23.63■■□□□ 1.37
SUDS3-204ENST00000543473 ESPNB1AK53 854 aa23.63■■□□□ 1.37
SUDS3-204ENST00000543473 DIAPH1O60610 1272 aaKnown RBP23.63■■□□□ 1.37
SUDS3-204ENST00000543473 KIF3AQ9Y496 699 aa23.63■■□□□ 1.37
SUDS3-204ENST00000543473 C11orf95C9JLR9 678 aaPredicted RBP23.62■■□□□ 1.37
SUDS3-204ENST00000543473 SF3A1Q15459 793 aaKnown RBP23.61■■□□□ 1.37
SUDS3-204ENST00000543473 GOLGA6L1Q8N7Z2 621 aa23.61■■□□□ 1.37
SUDS3-204ENST00000543473 RBM10P98175 930 aaKnown RBP23.6■■□□□ 1.37
SUDS3-204ENST00000543473 SKAP1Q86WV1 359 aa23.6■■□□□ 1.37
SUDS3-204ENST00000543473 RRP9O43818 475 aaKnown RBP23.6■■□□□ 1.37
SUDS3-204ENST00000543473 H3BQV1 296 aa23.6■■□□□ 1.37
SUDS3-204ENST00000543473 IFFO2Q5TF58 517 aa23.6■■□□□ 1.37
SUDS3-204ENST00000543473 CHMP3Q9Y3E7 222 aa23.59■■□□□ 1.37
SUDS3-204ENST00000543473 CABP2Q9NPB3 220 aa23.59■■□□□ 1.37
SUDS3-204ENST00000543473 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
SUDS3-204ENST00000543473 TULP1O00294 542 aaPredicted RBP23.57■■□□□ 1.36
SUDS3-204ENST00000543473 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
SUDS3-204ENST00000543473 MAP3K1Q13233 1512 aa23.57■■□□□ 1.36
SUDS3-204ENST00000543473 DIAPH3Q9NSV4 1193 aa23.57■■□□□ 1.36
SUDS3-204ENST00000543473 CCDC34Q96HJ3 373 aa23.56■■□□□ 1.36
SUDS3-204ENST00000543473 FAM184AQ8NB25 1140 aa23.56■■□□□ 1.36
SUDS3-204ENST00000543473 PRPF40AO75400 957 aaKnown RBP23.55■■□□□ 1.36
SUDS3-204ENST00000543473 MBD3O95983 291 aa23.55■■□□□ 1.36
SUDS3-204ENST00000543473 MTHFSP49914 203 aa23.55■■□□□ 1.36
SUDS3-204ENST00000543473 CCDC141Q6ZP82 1450 aa23.54■■□□□ 1.36
SUDS3-204ENST00000543473 CAMSAP2Q08AD1 1489 aa23.54■■□□□ 1.36
SUDS3-204ENST00000543473 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
SUDS3-204ENST00000543473 ABCC5O15440 1437 aa23.53■■□□□ 1.36
SUDS3-204ENST00000543473 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
SUDS3-204ENST00000543473 SMC3Q9UQE7 1217 aa23.53■■□□□ 1.36
SUDS3-204ENST00000543473 VPS37CA5D8V6 355 aaPredicted RBP23.52■■□□□ 1.36
SUDS3-204ENST00000543473 RUFY2Q8WXA3 655 aa23.52■■□□□ 1.36
SUDS3-204ENST00000543473 IFT57Q9NWB7 429 aa23.52■■□□□ 1.36
SUDS3-204ENST00000543473 GNAI1P63096 354 aa23.52■■□□□ 1.36
SUDS3-204ENST00000543473 RABEP1Q15276 862 aa23.51■■□□□ 1.35
SUDS3-204ENST00000543473 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
SUDS3-204ENST00000543473 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
SUDS3-204ENST00000543473 CCDC9Q9Y3X0 531 aaKnown RBP23.51■■□□□ 1.35
SUDS3-204ENST00000543473 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
SUDS3-204ENST00000543473 NINLQ9Y2I6 1382 aa23.5■■□□□ 1.35
SUDS3-204ENST00000543473 TXNDC2Q86VQ3 553 aa23.5■■□□□ 1.35
SUDS3-204ENST00000543473 BICD2Q8TD16 824 aa23.5■■□□□ 1.35
SUDS3-204ENST00000543473 GORABQ5T7V8 394 aa23.5■■□□□ 1.35
SUDS3-204ENST00000543473 CCAR2Q8N163 923 aaKnown RBP23.5■■□□□ 1.35
SUDS3-204ENST00000543473 PTPN23Q9H3S7 1636 aa23.5■■□□□ 1.35
SUDS3-204ENST00000543473 HMGN5P82970 282 aaKnown RBP23.5■■□□□ 1.35
SUDS3-204ENST00000543473 CD109Q6YHK3 1445 aa23.49■■□□□ 1.35
SUDS3-204ENST00000543473 CIZ1Q9ULV3 898 aaPredicted RBP23.48■■□□□ 1.35
SUDS3-204ENST00000543473 PSME1Q06323 249 aa23.48■■□□□ 1.35
SUDS3-204ENST00000543473 K7ELQ4 463 aaPredicted RBP23.47■■□□□ 1.35
SUDS3-204ENST00000543473 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
SUDS3-204ENST00000543473 NEK4P51957 841 aa23.46■■□□□ 1.35
SUDS3-204ENST00000543473 TPM3P06753 285 aa23.46■■□□□ 1.35
SUDS3-204ENST00000543473 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
SUDS3-204ENST00000543473 TSPY26PQ9H489 355 aa23.46■■□□□ 1.35
SUDS3-204ENST00000543473 SASS6Q6UVJ0 657 aa23.45■■□□□ 1.34
SUDS3-204ENST00000543473 KIF14Q15058 1648 aa23.45■■□□□ 1.34
SUDS3-204ENST00000543473 GCC1Q96CN9 775 aa23.45■■□□□ 1.34
SUDS3-204ENST00000543473 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
SUDS3-204ENST00000543473 HOMER1Q86YM7 354 aa23.44■■□□□ 1.34
SUDS3-204ENST00000543473 GPS2Q13227 327 aa23.43■■□□□ 1.34
SUDS3-204ENST00000543473 TEX35Q5T0J7 233 aa23.43■■□□□ 1.34
SUDS3-204ENST00000543473 TSR2Q969E8 191 aaKnown RBP23.43■■□□□ 1.34
SUDS3-204ENST00000543473 CREBRFQ8IUR6 639 aa23.43■■□□□ 1.34
SUDS3-204ENST00000543473 HMOX1P09601 288 aa23.42■■□□□ 1.34
SUDS3-204ENST00000543473 ZSCAN30Q86W11 494 aa23.42■■□□□ 1.34
SUDS3-204ENST00000543473 CHMP4CQ96CF2 233 aa23.42■■□□□ 1.34
SUDS3-204ENST00000543473 NOB1Q9ULX3 412 aaKnown RBP23.42■■□□□ 1.34
SUDS3-204ENST00000543473 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
SUDS3-204ENST00000543473 SLC12A5Q9H2X9 1139 aa23.42■■□□□ 1.34
SUDS3-204ENST00000543473 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
SUDS3-204ENST00000543473 MCM2P49736 904 aa23.41■■□□□ 1.34
SUDS3-204ENST00000543473 FKBP5Q13451 457 aaPredicted RBP23.41■■□□□ 1.34
SUDS3-204ENST00000543473 ERBINQ96RT1 1412 aa23.41■■□□□ 1.34
SUDS3-204ENST00000543473 WDR63Q8IWG1 891 aa23.4■■□□□ 1.34
SUDS3-204ENST00000543473 C1orf115Q9H7X2 142 aa23.4■■□□□ 1.34
SUDS3-204ENST00000543473 UQCRHLA0A096LP55 91 aa23.4■■□□□ 1.34
SUDS3-204ENST00000543473 UQCRHP07919 91 aa23.4■■□□□ 1.34
SUDS3-204ENST00000543473 ADGRL1O94910 1474 aa23.4■■□□□ 1.34
SUDS3-204ENST00000543473 ATF7IPQ6VMQ6 1270 aa23.39■■□□□ 1.34
SUDS3-204ENST00000543473 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
SUDS3-204ENST00000543473 LETM1O95202 739 aaPredicted RBP23.39■■□□□ 1.33
SUDS3-204ENST00000543473 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.38■■□□□ 1.33
SUDS3-204ENST00000543473 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
SUDS3-204ENST00000543473 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
SUDS3-204ENST00000543473 TEFQ10587 303 aa23.37■■□□□ 1.33
SUDS3-204ENST00000543473 C1orf141Q5JVX7 400 aa23.37■■□□□ 1.33
SUDS3-204ENST00000543473 NUTM2GQ5VZR2 741 aa23.37■■□□□ 1.33
SUDS3-204ENST00000543473 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
SUDS3-204ENST00000543473 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
SUDS3-204ENST00000543473 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms