RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 CALD1Q05682 793 aaKnown RBP17.98■□□□□ 0.47
RPS6KC1-207ENST00000543470 COL17A1Q9UMD9 1497 aaPredicted RBP17.98■□□□□ 0.47
RPS6KC1-207ENST00000543470 TRIM6-TRIM34B2RNG4 842 aa17.98■□□□□ 0.47
RPS6KC1-207ENST00000543470 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
RPS6KC1-207ENST00000543470 CHMP5Q9NZZ3 219 aa17.97■□□□□ 0.47
RPS6KC1-207ENST00000543470 BLMP54132 1417 aaPredicted RBP17.97■□□□□ 0.47
RPS6KC1-207ENST00000543470 A2MP01023 1474 aa17.97■□□□□ 0.47
RPS6KC1-207ENST00000543470 ITSN2Q9NZM3 1697 aa17.97■□□□□ 0.47
RPS6KC1-207ENST00000543470 TRAK2O60296 914 aa17.96■□□□□ 0.47
RPS6KC1-207ENST00000543470 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
RPS6KC1-207ENST00000543470 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
RPS6KC1-207ENST00000543470 RLBP1P12271 317 aa17.95■□□□□ 0.46
RPS6KC1-207ENST00000543470 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
RPS6KC1-207ENST00000543470 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
RPS6KC1-207ENST00000543470 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
RPS6KC1-207ENST00000543470 EXOSC9Q06265 439 aaKnown RBP17.95■□□□□ 0.46
RPS6KC1-207ENST00000543470 ZMYM4Q5VZL5 1548 aa17.94■□□□□ 0.46
RPS6KC1-207ENST00000543470 NRDCO43847 1150 aa17.94■□□□□ 0.46
RPS6KC1-207ENST00000543470 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
RPS6KC1-207ENST00000543470 NGEFQ8N5V2 710 aa17.93■□□□□ 0.46
RPS6KC1-207ENST00000543470 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
RPS6KC1-207ENST00000543470 MCM4P33991 863 aa17.93■□□□□ 0.46
RPS6KC1-207ENST00000543470 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
RPS6KC1-207ENST00000543470 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
RPS6KC1-207ENST00000543470 GGNBP2Q9H3C7 697 aa17.93■□□□□ 0.46
RPS6KC1-207ENST00000543470 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
RPS6KC1-207ENST00000543470 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
RPS6KC1-207ENST00000543470 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
RPS6KC1-207ENST00000543470 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
RPS6KC1-207ENST00000543470 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
RPS6KC1-207ENST00000543470 ZNF330Q9Y3S2 320 aaPredicted RBP17.9■□□□□ 0.46
RPS6KC1-207ENST00000543470 GOLGA6L6A8MZA4 724 aa17.9■□□□□ 0.46
RPS6KC1-207ENST00000543470 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
RPS6KC1-207ENST00000543470 DDX49Q9Y6V7 483 aaKnown RBP17.9■□□□□ 0.46
RPS6KC1-207ENST00000543470 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.45
RPS6KC1-207ENST00000543470 DDX19BQ9UMR2 479 aa17.89■□□□□ 0.45
RPS6KC1-207ENST00000543470 RIPK4P57078 832 aa17.89■□□□□ 0.45
RPS6KC1-207ENST00000543470 MAGI2Q86UL8 1455 aa17.88■□□□□ 0.45
RPS6KC1-207ENST00000543470 TBC1D32Q96NH3 1257 aa17.88■□□□□ 0.45
RPS6KC1-207ENST00000543470 DDX11L8A8MPP1 907 aa17.88■□□□□ 0.45
RPS6KC1-207ENST00000543470 HMMRO75330 724 aa17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 C1orf115Q9H7X2 142 aa17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 SYCP2Q9BX26 1530 aa17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 GPRASP1Q5JY77 1395 aa17.87■□□□□ 0.45
RPS6KC1-207ENST00000543470 HSP90AA2PQ14568 343 aaPredicted RBP17.86■□□□□ 0.45
RPS6KC1-207ENST00000543470 ZNF521Q96K83 1311 aa17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 ASXL1Q8IXJ9 1541 aa17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 SCAF11Q99590 1463 aaKnown RBP17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 NPHP1O15259 732 aa17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 XRCC6P12956 609 aaKnown RBP eCLIP17.85■□□□□ 0.453e-6■■■■□ 23
RPS6KC1-207ENST00000543470 VSIG10Q8N0Z9 540 aa17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 RRAGDQ9NQL2 400 aaPredicted RBP17.85■□□□□ 0.45
RPS6KC1-207ENST00000543470 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
RPS6KC1-207ENST00000543470 MINK1Q8N4C8 1332 aaPredicted RBP17.84■□□□□ 0.45
RPS6KC1-207ENST00000543470 SYAP1Q96A49 352 aaPredicted RBP17.84■□□□□ 0.45
RPS6KC1-207ENST00000543470 PTMSP20962 102 aa17.83■□□□□ 0.45
RPS6KC1-207ENST00000543470 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.45
RPS6KC1-207ENST00000543470 MRE11P49959 708 aa17.83■□□□□ 0.44
RPS6KC1-207ENST00000543470 STAC3Q96MF2 364 aa17.83■□□□□ 0.44
RPS6KC1-207ENST00000543470 ST18O60284 1047 aa17.83■□□□□ 0.44
RPS6KC1-207ENST00000543470 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
RPS6KC1-207ENST00000543470 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
RPS6KC1-207ENST00000543470 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
RPS6KC1-207ENST00000543470 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
RPS6KC1-207ENST00000543470 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
RPS6KC1-207ENST00000543470 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
RPS6KC1-207ENST00000543470 GNL2Q13823 731 aaKnown RBP17.81■□□□□ 0.44
RPS6KC1-207ENST00000543470 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
RPS6KC1-207ENST00000543470 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 AMPHP49418 695 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 AAMPQ13685 434 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 HMOX1P09601 288 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 TRIM27P14373 513 aa17.8■□□□□ 0.44
RPS6KC1-207ENST00000543470 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
RPS6KC1-207ENST00000543470 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
RPS6KC1-207ENST00000543470 USP19O94966 1318 aa17.79■□□□□ 0.44
RPS6KC1-207ENST00000543470 SCAPERQ9BY12 1400 aa17.79■□□□□ 0.44
RPS6KC1-207ENST00000543470 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
RPS6KC1-207ENST00000543470 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
RPS6KC1-207ENST00000543470 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
RPS6KC1-207ENST00000543470 CSB-PGBD3P0DP91 1061 aa17.78■□□□□ 0.44
RPS6KC1-207ENST00000543470 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.43
RPS6KC1-207ENST00000543470 NUP160Q12769 1436 aa17.77■□□□□ 0.43
RPS6KC1-207ENST00000543470 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.43
RPS6KC1-207ENST00000543470 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
RPS6KC1-207ENST00000543470 INSRP06213 1382 aa17.76■□□□□ 0.43
RPS6KC1-207ENST00000543470 TMPOP42166 694 aaKnown RBP17.75■□□□□ 0.43
RPS6KC1-207ENST00000543470 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
RPS6KC1-207ENST00000543470 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
RPS6KC1-207ENST00000543470 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
RPS6KC1-207ENST00000543470 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
RPS6KC1-207ENST00000543470 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
RPS6KC1-207ENST00000543470 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
RPS6KC1-207ENST00000543470 ESPNB1AK53 854 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms