RNA–Protein interactions for RNA: ENST00000543368.1

NPIPB3-212, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-212ENST00000543368 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
NPIPB3-212ENST00000543368 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
NPIPB3-212ENST00000543368 WAPLQ7Z5K2 1190 aa14.88□□□□□ -0.03
NPIPB3-212ENST00000543368 POGKQ9P215 609 aa14.88□□□□□ -0.03
NPIPB3-212ENST00000543368 NPHP3Q7Z494 1330 aa14.87□□□□□ -0.03
NPIPB3-212ENST00000543368 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
NPIPB3-212ENST00000543368 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
NPIPB3-212ENST00000543368 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
NPIPB3-212ENST00000543368 ESCO1Q5FWF5 840 aa14.85□□□□□ -0.03
NPIPB3-212ENST00000543368 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
NPIPB3-212ENST00000543368 PRAM1Q96QH2 718 aa14.85□□□□□ -0.03
NPIPB3-212ENST00000543368 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
NPIPB3-212ENST00000543368 SOCS7O14512 581 aa14.84□□□□□ -0.03
NPIPB3-212ENST00000543368 MEX3CQ5U5Q3 659 aaKnown RBP14.84□□□□□ -0.03
NPIPB3-212ENST00000543368 SOS2Q07890 1332 aaPredicted RBP14.84□□□□□ -0.03
NPIPB3-212ENST00000543368 PLEKHH1Q9ULM0 1364 aa14.84□□□□□ -0.03
NPIPB3-212ENST00000543368 ORAI2Q96SN7 254 aa14.83□□□□□ -0.04
NPIPB3-212ENST00000543368 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
NPIPB3-212ENST00000543368 ZNF772Q68DY9 489 aaPredicted RBP14.81□□□□□ -0.04
NPIPB3-212ENST00000543368 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
NPIPB3-212ENST00000543368 KIAA1210Q9ULL0 1709 aa14.8□□□□□ -0.04
NPIPB3-212ENST00000543368 ADGRB2O60241 1585 aa14.79□□□□□ -0.04
NPIPB3-212ENST00000543368 KIF1AQ12756 1690 aa14.79□□□□□ -0.04
NPIPB3-212ENST00000543368 PNPLA6Q8IY17 1366 aa14.79□□□□□ -0.04
NPIPB3-212ENST00000543368 FMN2Q9NZ56 1722 aa14.79□□□□□ -0.04
NPIPB3-212ENST00000543368 PSME1Q06323 249 aa14.78□□□□□ -0.04
NPIPB3-212ENST00000543368 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
NPIPB3-212ENST00000543368 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.05
NPIPB3-212ENST00000543368 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.05
NPIPB3-212ENST00000543368 FOXO3O43524 673 aa14.77□□□□□ -0.05
NPIPB3-212ENST00000543368 NUTM2AQ8IVF1 878 aaPredicted RBP14.77□□□□□ -0.05
NPIPB3-212ENST00000543368 DDX17Q92841 729 aaKnown RBP14.77□□□□□ -0.05
NPIPB3-212ENST00000543368 PHF8Q9UPP1 1060 aa14.77□□□□□ -0.05
NPIPB3-212ENST00000543368 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
NPIPB3-212ENST00000543368 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
NPIPB3-212ENST00000543368 RGS17Q9UGC6 210 aaPredicted RBP14.76□□□□□ -0.05
NPIPB3-212ENST00000543368 LRP6O75581 1613 aa14.75□□□□□ -0.05
NPIPB3-212ENST00000543368 WASLO00401 505 aaPredicted RBP14.75□□□□□ -0.05
NPIPB3-212ENST00000543368 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
NPIPB3-212ENST00000543368 NEUROD1Q13562 356 aa14.74□□□□□ -0.05
NPIPB3-212ENST00000543368 PXDNQ92626 1479 aa14.74□□□□□ -0.05
NPIPB3-212ENST00000543368 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
NPIPB3-212ENST00000543368 KRT28Q7Z3Y7 464 aa14.73□□□□□ -0.05
NPIPB3-212ENST00000543368 SIN3AQ96ST3 1273 aa14.73□□□□□ -0.05
NPIPB3-212ENST00000543368 SBNO1A3KN83 1393 aa14.72□□□□□ -0.05
NPIPB3-212ENST00000543368 GPRASP1Q5JY77 1395 aa14.72□□□□□ -0.05
NPIPB3-212ENST00000543368 SPATA31A3Q5VYP0 1347 aa14.71□□□□□ -0.05
NPIPB3-212ENST00000543368 COL22A1Q8NFW1 1626 aaPredicted RBP14.71□□□□□ -0.05
NPIPB3-212ENST00000543368 POTEAQ6S8J7 498 aa14.71□□□□□ -0.05
NPIPB3-212ENST00000543368 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
NPIPB3-212ENST00000543368 ARHGEF28Q8N1W1 1705 aaKnown RBP14.71□□□□□ -0.05
NPIPB3-212ENST00000543368 ARHGEF10O15013 1369 aa14.71□□□□□ -0.06
NPIPB3-212ENST00000543368 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
NPIPB3-212ENST00000543368 NBPF1Q3BBV0 1214 aa14.7□□□□□ -0.06
NPIPB3-212ENST00000543368 TONSLQ96HA7 1378 aa14.7□□□□□ -0.06
NPIPB3-212ENST00000543368 AFF2P51816 1311 aa14.69□□□□□ -0.06
NPIPB3-212ENST00000543368 TNS3Q68CZ2 1445 aa14.69□□□□□ -0.06
NPIPB3-212ENST00000543368 NGLY1Q96IV0 654 aa14.69□□□□□ -0.06
NPIPB3-212ENST00000543368 C8orf37Q96NL8 207 aa14.69□□□□□ -0.06
NPIPB3-212ENST00000543368 RXRBP28702 533 aa14.68□□□□□ -0.06
NPIPB3-212ENST00000543368 XPCQ01831 940 aaPredicted RBP14.68□□□□□ -0.06
NPIPB3-212ENST00000543368 ROCK2O75116 1388 aaKnown RBP14.68□□□□□ -0.06
NPIPB3-212ENST00000543368 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
NPIPB3-212ENST00000543368 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
NPIPB3-212ENST00000543368 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
NPIPB3-212ENST00000543368 CDK19Q9BWU1 502 aa14.67□□□□□ -0.06
NPIPB3-212ENST00000543368 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
NPIPB3-212ENST00000543368 PMFBP1Q8TBY8 1022 aa14.66□□□□□ -0.06
NPIPB3-212ENST00000543368 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
NPIPB3-212ENST00000543368 CDK12Q9NYV4 1490 aaPredicted RBP14.65□□□□□ -0.06
NPIPB3-212ENST00000543368 FNBP4Q8N3X1 1017 aaPredicted RBP14.65□□□□□ -0.06
NPIPB3-212ENST00000543368 ITSN1Q15811 1721 aa14.65□□□□□ -0.06
NPIPB3-212ENST00000543368 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
NPIPB3-212ENST00000543368 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
NPIPB3-212ENST00000543368 TRPM1Q7Z4N2 1603 aa14.64□□□□□ -0.07
NPIPB3-212ENST00000543368 RBM6P78332 1123 aaKnown RBP14.64□□□□□ -0.07
NPIPB3-212ENST00000543368 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
NPIPB3-212ENST00000543368 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
NPIPB3-212ENST00000543368 ATP7BP35670 1465 aa14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 RGPD8O14715 1765 aaPredicted RBP14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 SRPK2P78362 688 aaKnown RBP14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 LMOD2Q6P5Q4 547 aa14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 USP21Q9UK80 565 aa14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 EVC2Q86UK5 1308 aa14.63□□□□□ -0.07
NPIPB3-212ENST00000543368 BRD4O60885 1362 aaPredicted RBP14.62□□□□□ -0.07
NPIPB3-212ENST00000543368 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
NPIPB3-212ENST00000543368 TIMELESSQ9UNS1 1208 aa14.61□□□□□ -0.07
NPIPB3-212ENST00000543368 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
NPIPB3-212ENST00000543368 CARD11Q9BXL7 1154 aa14.6□□□□□ -0.07
NPIPB3-212ENST00000543368 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
NPIPB3-212ENST00000543368 SBNO2Q9Y2G9 1366 aa14.59□□□□□ -0.07
NPIPB3-212ENST00000543368 RALGAPBQ86X10 1494 aa14.58□□□□□ -0.08
NPIPB3-212ENST00000543368 NBPF8Q3BBV2 869 aa14.58□□□□□ -0.08
NPIPB3-212ENST00000543368 ACEP12821 1306 aa14.58□□□□□ -0.08
NPIPB3-212ENST00000543368 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
NPIPB3-212ENST00000543368 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
NPIPB3-212ENST00000543368 UNC5CLQ8IV45 518 aa14.57□□□□□ -0.08
NPIPB3-212ENST00000543368 TRPM3Q9HCF6 1732 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 535.1 ms