RNA–Protein interactions for RNA: ENST00000542165.1

CWC15-203, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 1 (best)

Gene CWC15, Length 921 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-203ENST00000542165 POGKQ9P215 609 aa29.89■■■□□ 2.38
CWC15-203ENST00000542165 COL16A1Q07092 1604 aaPredicted RBP29.89■■■□□ 2.37
CWC15-203ENST00000542165 JCADQ9P266 1359 aa29.89■■■□□ 2.37
CWC15-203ENST00000542165 SIN3AQ96ST3 1273 aa29.88■■■□□ 2.37
CWC15-203ENST00000542165 KIAA1210Q9ULL0 1709 aa29.88■■■□□ 2.37
CWC15-203ENST00000542165 NEUROD1Q13562 356 aa29.87■■■□□ 2.37
CWC15-203ENST00000542165 PRAM1Q96QH2 718 aa29.87■■■□□ 2.37
CWC15-203ENST00000542165 TRAK1Q9UPV9 953 aa29.86■■■□□ 2.37
CWC15-203ENST00000542165 NHSL1Q5SYE7 1610 aa29.85■■■□□ 2.37
CWC15-203ENST00000542165 L3MBTL2Q969R5 705 aa29.84■■■□□ 2.37
CWC15-203ENST00000542165 PHF23Q9BUL5 403 aaPredicted RBP29.81■■■□□ 2.36
CWC15-203ENST00000542165 SAFB2Q14151 953 aaKnown RBP eCLIP29.8■■■□□ 2.36
CWC15-203ENST00000542165 ESCO1Q5FWF5 840 aa29.79■■■□□ 2.36
CWC15-203ENST00000542165 ORAI2Q96SN7 254 aa29.79■■■□□ 2.36
CWC15-203ENST00000542165 FMN2Q9NZ56 1722 aa29.79■■■□□ 2.36
CWC15-203ENST00000542165 LRRC59Q96AG4 307 aaKnown RBP29.78■■■□□ 2.36
CWC15-203ENST00000542165 SPATA31A6Q5VVP1 1343 aa29.76■■■□□ 2.36
CWC15-203ENST00000542165 ADGRB2O60241 1585 aa29.76■■■□□ 2.35
CWC15-203ENST00000542165 SHPRHQ149N8 1683 aa29.76■■■□□ 2.35
CWC15-203ENST00000542165 NPHP3Q7Z494 1330 aa29.74■■■□□ 2.35
CWC15-203ENST00000542165 EIF3AQ14152 1382 aaKnown RBP29.74■■■□□ 2.35
CWC15-203ENST00000542165 NUTM2FA1L443 756 aa29.73■■■□□ 2.35
CWC15-203ENST00000542165 ARHGEF28Q8N1W1 1705 aaKnown RBP29.73■■■□□ 2.35
CWC15-203ENST00000542165 TONSLQ96HA7 1378 aa29.72■■■□□ 2.35
CWC15-203ENST00000542165 KIF1AQ12756 1690 aa29.7■■■□□ 2.35
CWC15-203ENST00000542165 DDX17Q92841 729 aaKnown RBP29.7■■■□□ 2.35
CWC15-203ENST00000542165 SOS2Q07890 1332 aaPredicted RBP29.7■■■□□ 2.34
CWC15-203ENST00000542165 MINK1Q8N4C8 1332 aaPredicted RBP29.7■■■□□ 2.34
CWC15-203ENST00000542165 NBPF1Q3BBV0 1214 aa29.69■■■□□ 2.34
CWC15-203ENST00000542165 ANKARQ7Z5J8 1434 aa29.69■■■□□ 2.34
CWC15-203ENST00000542165 PCGF6Q9BYE7 350 aa29.67■■■□□ 2.34
CWC15-203ENST00000542165 HIRIP3Q9BW71 556 aaPredicted RBP29.66■■■□□ 2.34
CWC15-203ENST00000542165 TRPM1Q7Z4N2 1603 aa29.65■■■□□ 2.34
CWC15-203ENST00000542165 WASLO00401 505 aaPredicted RBP29.64■■■□□ 2.34
CWC15-203ENST00000542165 FOXO3O43524 673 aa29.64■■■□□ 2.34
CWC15-203ENST00000542165 MEX3CQ5U5Q3 659 aaKnown RBP29.63■■■□□ 2.33
CWC15-203ENST00000542165 PHF8Q9UPP1 1060 aa29.63■■■□□ 2.33
CWC15-203ENST00000542165 ROCK2O75116 1388 aaKnown RBP29.63■■■□□ 2.33
CWC15-203ENST00000542165 PNPLA6Q8IY17 1366 aa29.63■■■□□ 2.33
CWC15-203ENST00000542165 TULP4Q9NRJ4 1543 aa29.61■■■□□ 2.33
CWC15-203ENST00000542165 CENPJQ9HC77 1338 aaPredicted RBP29.6■■■□□ 2.33
CWC15-203ENST00000542165 PXDNQ92626 1479 aa29.6■■■□□ 2.33
CWC15-203ENST00000542165 RGPD8O14715 1765 aaPredicted RBP29.59■■■□□ 2.33
CWC15-203ENST00000542165 LRP6O75581 1613 aa29.57■■■□□ 2.32
CWC15-203ENST00000542165 NUTM2BA6NNL0 878 aaPredicted RBP29.57■■■□□ 2.32
CWC15-203ENST00000542165 NUTM2EB1AL46 878 aaPredicted RBP29.57■■■□□ 2.32
CWC15-203ENST00000542165 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
CWC15-203ENST00000542165 NUTM2AQ8IVF1 878 aaPredicted RBP29.57■■■□□ 2.32
CWC15-203ENST00000542165 USP32Q8NFA0 1604 aa29.56■■■□□ 2.32
CWC15-203ENST00000542165 CLSPNQ9HAW4 1339 aa29.56■■■□□ 2.32
CWC15-203ENST00000542165 PSME1Q06323 249 aa29.56■■■□□ 2.32
CWC15-203ENST00000542165 XPCQ01831 940 aaPredicted RBP29.54■■■□□ 2.32
CWC15-203ENST00000542165 NBPF8Q3BBV2 869 aa29.53■■■□□ 2.32
CWC15-203ENST00000542165 KRT28Q7Z3Y7 464 aa29.53■■■□□ 2.32
CWC15-203ENST00000542165 GPRASP1Q5JY77 1395 aa29.52■■■□□ 2.32
CWC15-203ENST00000542165 ITSN1Q15811 1721 aa29.51■■■□□ 2.32
CWC15-203ENST00000542165 CDK19Q9BWU1 502 aa29.51■■■□□ 2.31
CWC15-203ENST00000542165 COL22A1Q8NFW1 1626 aaPredicted RBP29.51■■■□□ 2.31
CWC15-203ENST00000542165 PRR36Q9H6K5 1346 aa29.5■■■□□ 2.31
CWC15-203ENST00000542165 PMFBP1Q8TBY8 1022 aa29.5■■■□□ 2.31
CWC15-203ENST00000542165 QRICH2Q9H0J4 1663 aa29.5■■■□□ 2.31
CWC15-203ENST00000542165 NUDT16Q96DE0 195 aaKnown RBP29.49■■■□□ 2.31
CWC15-203ENST00000542165 RGS17Q9UGC6 210 aaPredicted RBP29.49■■■□□ 2.31
CWC15-203ENST00000542165 ATP7BP35670 1465 aa29.48■■■□□ 2.31
CWC15-203ENST00000542165 RALGAPBQ86X10 1494 aa29.48■■■□□ 2.31
CWC15-203ENST00000542165 SPATA31A3Q5VYP0 1347 aa29.47■■■□□ 2.31
CWC15-203ENST00000542165 ZNF772Q68DY9 489 aaPredicted RBP29.47■■■□□ 2.31
CWC15-203ENST00000542165 CARD11Q9BXL7 1154 aa29.47■■■□□ 2.31
CWC15-203ENST00000542165 SBNO1A3KN83 1393 aa29.47■■■□□ 2.31
CWC15-203ENST00000542165 NGDNQ8NEJ9 315 aaKnown RBP29.46■■■□□ 2.31
CWC15-203ENST00000542165 TNS3Q68CZ2 1445 aa29.45■■■□□ 2.31
CWC15-203ENST00000542165 SRPK2P78362 688 aaKnown RBP29.44■■■□□ 2.3
CWC15-203ENST00000542165 TIMELESSQ9UNS1 1208 aa29.44■■■□□ 2.3
CWC15-203ENST00000542165 CCDC61Q9Y6R9 512 aa29.44■■■□□ 2.3
CWC15-203ENST00000542165 ARHGEF10O15013 1369 aa29.43■■■□□ 2.3
CWC15-203ENST00000542165 EVC2Q86UK5 1308 aa29.42■■■□□ 2.3
CWC15-203ENST00000542165 C8orf37Q96NL8 207 aa29.41■■■□□ 2.3
CWC15-203ENST00000542165 ADAMTS2O95450 1211 aa29.4■■■□□ 2.3
CWC15-203ENST00000542165 TOPAZ1Q8N9V7 1692 aa29.39■■■□□ 2.3
CWC15-203ENST00000542165 LMOD2Q6P5Q4 547 aa29.38■■■□□ 2.29
CWC15-203ENST00000542165 POTEAQ6S8J7 498 aa29.38■■■□□ 2.29
CWC15-203ENST00000542165 AFF2P51816 1311 aa29.38■■■□□ 2.29
CWC15-203ENST00000542165 SOCS7O14512 581 aa29.37■■■□□ 2.29
CWC15-203ENST00000542165 CCER1Q8TC90 406 aaPredicted RBP29.36■■■□□ 2.29
CWC15-203ENST00000542165 NGLY1Q96IV0 654 aa29.36■■■□□ 2.29
CWC15-203ENST00000542165 PLEKHG3A1L390 1219 aa29.35■■■□□ 2.29
CWC15-203ENST00000542165 HAP1P54257 671 aaPredicted RBP29.35■■■□□ 2.29
CWC15-203ENST00000542165 CABP2Q9NPB3 220 aa29.35■■■□□ 2.29
CWC15-203ENST00000542165 POLR3AO14802 1390 aaPredicted RBP29.35■■■□□ 2.29
CWC15-203ENST00000542165 SBNO2Q9Y2G9 1366 aa29.35■■■□□ 2.29
CWC15-203ENST00000542165 TRPM3Q9HCF6 1732 aaPredicted RBP29.34■■■□□ 2.29
CWC15-203ENST00000542165 PPIP5K1Q6PFW1 1433 aa29.33■■■□□ 2.29
CWC15-203ENST00000542165 ACEP12821 1306 aa29.32■■■□□ 2.28
CWC15-203ENST00000542165 PAK3O75914 559 aaPredicted RBP29.31■■■□□ 2.28
CWC15-203ENST00000542165 MARF1Q9Y4F3 1742 aaKnown RBP29.3■■■□□ 2.28
CWC15-203ENST00000542165 ALS2Q96Q42 1657 aa29.28■■■□□ 2.28
CWC15-203ENST00000542165 SLC24A1O60721 1099 aa29.28■■■□□ 2.28
CWC15-203ENST00000542165 ATAD2Q6PL18 1390 aa29.27■■■□□ 2.28
CWC15-203ENST00000542165 FNBP4Q8N3X1 1017 aaPredicted RBP29.26■■■□□ 2.27
CWC15-203ENST00000542165 USP21Q9UK80 565 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms