RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 NCOA3Q9Y6Q9 1424 aa17.44■□□□□ 0.38
LMO3-228ENST00000541846 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
LMO3-228ENST00000541846 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
LMO3-228ENST00000541846 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
LMO3-228ENST00000541846 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
LMO3-228ENST00000541846 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
LMO3-228ENST00000541846 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
LMO3-228ENST00000541846 TMF1P82094 1093 aa17.42■□□□□ 0.38
LMO3-228ENST00000541846 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
LMO3-228ENST00000541846 SLC24A1O60721 1099 aa17.4■□□□□ 0.38
LMO3-228ENST00000541846 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
LMO3-228ENST00000541846 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
LMO3-228ENST00000541846 ADGRB2O60241 1585 aa17.39■□□□□ 0.37
LMO3-228ENST00000541846 TMEM94Q12767 1356 aa17.39■□□□□ 0.37
LMO3-228ENST00000541846 MYOM1P52179 1685 aa17.38■□□□□ 0.37
LMO3-228ENST00000541846 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
LMO3-228ENST00000541846 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
LMO3-228ENST00000541846 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
LMO3-228ENST00000541846 C19orf44Q9H6X5 657 aa17.36■□□□□ 0.37
LMO3-228ENST00000541846 EVC2Q86UK5 1308 aa17.36■□□□□ 0.37
LMO3-228ENST00000541846 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
LMO3-228ENST00000541846 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
LMO3-228ENST00000541846 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
LMO3-228ENST00000541846 ADGRL3Q9HAR2 1447 aa17.34■□□□□ 0.37
LMO3-228ENST00000541846 WASLO00401 505 aaPredicted RBP17.33■□□□□ 0.36
LMO3-228ENST00000541846 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
LMO3-228ENST00000541846 DCCP43146 1447 aa17.3■□□□□ 0.36
LMO3-228ENST00000541846 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
LMO3-228ENST00000541846 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
LMO3-228ENST00000541846 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
LMO3-228ENST00000541846 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
LMO3-228ENST00000541846 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
LMO3-228ENST00000541846 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
LMO3-228ENST00000541846 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
LMO3-228ENST00000541846 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
LMO3-228ENST00000541846 RGPD8O14715 1765 aaPredicted RBP17.28■□□□□ 0.36
LMO3-228ENST00000541846 MSH6P52701 1360 aa17.28■□□□□ 0.36
LMO3-228ENST00000541846 TOPAZ1Q8N9V7 1692 aa17.27■□□□□ 0.36
LMO3-228ENST00000541846 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.36
LMO3-228ENST00000541846 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
LMO3-228ENST00000541846 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
LMO3-228ENST00000541846 ATP7BP35670 1465 aa17.26■□□□□ 0.35
LMO3-228ENST00000541846 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
LMO3-228ENST00000541846 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
LMO3-228ENST00000541846 ATF3P18847 181 aa17.25■□□□□ 0.35
LMO3-228ENST00000541846 PRR36Q9H6K5 1346 aa17.23■□□□□ 0.35
LMO3-228ENST00000541846 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
LMO3-228ENST00000541846 NUDT16Q96DE0 195 aaKnown RBP17.23■□□□□ 0.35
LMO3-228ENST00000541846 TMC1Q8TDI8 760 aa17.22■□□□□ 0.35
LMO3-228ENST00000541846 SLC12A5Q9H2X9 1139 aa17.22■□□□□ 0.35
LMO3-228ENST00000541846 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
LMO3-228ENST00000541846 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
LMO3-228ENST00000541846 NINLQ9Y2I6 1382 aa17.22■□□□□ 0.35
LMO3-228ENST00000541846 MST1RQ04912 1400 aa17.21■□□□□ 0.35
LMO3-228ENST00000541846 PANK3Q9H999 370 aa17.21■□□□□ 0.35
LMO3-228ENST00000541846 AKAP12Q02952 1782 aa17.2■□□□□ 0.34
LMO3-228ENST00000541846 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
LMO3-228ENST00000541846 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
LMO3-228ENST00000541846 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
LMO3-228ENST00000541846 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
LMO3-228ENST00000541846 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
LMO3-228ENST00000541846 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
LMO3-228ENST00000541846 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
LMO3-228ENST00000541846 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
LMO3-228ENST00000541846 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
LMO3-228ENST00000541846 TOM1O60784 492 aa17.16■□□□□ 0.34
LMO3-228ENST00000541846 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
LMO3-228ENST00000541846 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
LMO3-228ENST00000541846 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
LMO3-228ENST00000541846 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
LMO3-228ENST00000541846 ESCO1Q5FWF5 840 aa17.14■□□□□ 0.33
LMO3-228ENST00000541846 BRINP3Q76B58 766 aa17.14■□□□□ 0.33
LMO3-228ENST00000541846 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
LMO3-228ENST00000541846 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
LMO3-228ENST00000541846 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
LMO3-228ENST00000541846 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
LMO3-228ENST00000541846 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
LMO3-228ENST00000541846 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
LMO3-228ENST00000541846 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
LMO3-228ENST00000541846 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
LMO3-228ENST00000541846 KIF1AQ12756 1690 aa17.11■□□□□ 0.33
LMO3-228ENST00000541846 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
LMO3-228ENST00000541846 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
LMO3-228ENST00000541846 ACEP12821 1306 aa17.11■□□□□ 0.33
LMO3-228ENST00000541846 ANP32CO43423 234 aa17.1■□□□□ 0.33
LMO3-228ENST00000541846 MIER1Q8N108 512 aa17.1■□□□□ 0.33
LMO3-228ENST00000541846 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
LMO3-228ENST00000541846 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
LMO3-228ENST00000541846 ANKRD26Q9UPS8 1709 aa17.09■□□□□ 0.33
LMO3-228ENST00000541846 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
LMO3-228ENST00000541846 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
LMO3-228ENST00000541846 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
LMO3-228ENST00000541846 USP6P35125 1406 aa17.07■□□□□ 0.32
LMO3-228ENST00000541846 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
LMO3-228ENST00000541846 FOXO3O43524 673 aa17.07■□□□□ 0.32
LMO3-228ENST00000541846 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
LMO3-228ENST00000541846 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
LMO3-228ENST00000541846 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
LMO3-228ENST00000541846 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
LMO3-228ENST00000541846 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms