RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 MS4A1P11836 297 aa19.31■□□□□ 0.68
VARS2-211ENST00000541562 APBB1O00213 710 aa19.31■□□□□ 0.68
VARS2-211ENST00000541562 RARSP54136 660 aaKnown RBP19.3■□□□□ 0.68
VARS2-211ENST00000541562 CGNL1Q0VF96 1302 aa19.3■□□□□ 0.68
VARS2-211ENST00000541562 ERVK-7P63135 1459 aa19.3■□□□□ 0.68
VARS2-211ENST00000541562 ZMYM4Q5VZL5 1548 aa19.3■□□□□ 0.68
VARS2-211ENST00000541562 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
VARS2-211ENST00000541562 IQGAP3Q86VI3 1631 aa19.29■□□□□ 0.68
VARS2-211ENST00000541562 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
VARS2-211ENST00000541562 MAPK8IP3Q9UPT6 1336 aa19.28■□□□□ 0.68
VARS2-211ENST00000541562 RIPK4P57078 832 aa19.28■□□□□ 0.68
VARS2-211ENST00000541562 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
VARS2-211ENST00000541562 UNC13BO14795 1591 aa19.28■□□□□ 0.68
VARS2-211ENST00000541562 CD109Q6YHK3 1445 aa19.28■□□□□ 0.68
VARS2-211ENST00000541562 C14orf93Q9H972 538 aaKnown RBP19.28■□□□□ 0.68
VARS2-211ENST00000541562 PDZRN3Q9UPQ7 1066 aa19.28■□□□□ 0.68
VARS2-211ENST00000541562 GZF1Q9H116 711 aaPredicted RBP19.27■□□□□ 0.68
VARS2-211ENST00000541562 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
VARS2-211ENST00000541562 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
VARS2-211ENST00000541562 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
VARS2-211ENST00000541562 ZFYVE16Q7Z3T8 1539 aa19.24■□□□□ 0.67
VARS2-211ENST00000541562 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
VARS2-211ENST00000541562 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
VARS2-211ENST00000541562 RRS1Q15050 365 aaKnown RBP19.24■□□□□ 0.67
VARS2-211ENST00000541562 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
VARS2-211ENST00000541562 DDRGK1Q96HY6 314 aa19.23■□□□□ 0.67
VARS2-211ENST00000541562 TXNDC2Q86VQ3 553 aa19.23■□□□□ 0.67
VARS2-211ENST00000541562 MADDQ8WXG6 1647 aa19.23■□□□□ 0.67
VARS2-211ENST00000541562 NPATQ14207 1427 aa19.23■□□□□ 0.67
VARS2-211ENST00000541562 CDK19Q9BWU1 502 aa19.22■□□□□ 0.67
VARS2-211ENST00000541562 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
VARS2-211ENST00000541562 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
VARS2-211ENST00000541562 LNPKQ9C0E8 428 aa19.21■□□□□ 0.67
VARS2-211ENST00000541562 EMILIN1Q9Y6C2 1016 aa19.21■□□□□ 0.67
VARS2-211ENST00000541562 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
VARS2-211ENST00000541562 FYB1O15117 783 aa19.19■□□□□ 0.66
VARS2-211ENST00000541562 PRKAR2BP31323 418 aa19.19■□□□□ 0.66
VARS2-211ENST00000541562 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
VARS2-211ENST00000541562 TRMT2AQ8IZ69 625 aaKnown RBP19.18■□□□□ 0.66
VARS2-211ENST00000541562 PTPRTO14522 1441 aa19.18■□□□□ 0.66
VARS2-211ENST00000541562 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
VARS2-211ENST00000541562 TMPOP42166 694 aaKnown RBP19.18■□□□□ 0.66
VARS2-211ENST00000541562 DZIP1LQ8IYY4 767 aaKnown RBP19.17■□□□□ 0.66
VARS2-211ENST00000541562 PHACTR3Q96KR7 559 aa19.17■□□□□ 0.66
VARS2-211ENST00000541562 TRPM2O94759 1503 aa19.17■□□□□ 0.66
VARS2-211ENST00000541562 NME9Q86XW9 330 aa19.17■□□□□ 0.66
VARS2-211ENST00000541562 ZNF428Q96B54 188 aa19.17■□□□□ 0.66
VARS2-211ENST00000541562 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
VARS2-211ENST00000541562 TRIM27P14373 513 aa19.16■□□□□ 0.66
VARS2-211ENST00000541562 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
VARS2-211ENST00000541562 KRT24Q2M2I5 525 aa19.15■□□□□ 0.66
VARS2-211ENST00000541562 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
VARS2-211ENST00000541562 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
VARS2-211ENST00000541562 RBM33Q96EV2 1170 aaKnown RBP19.14■□□□□ 0.66
VARS2-211ENST00000541562 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.66
VARS2-211ENST00000541562 A0A1W2PP64 1363 aa19.14■□□□□ 0.66
VARS2-211ENST00000541562 DIAPH1O60610 1272 aaKnown RBP19.14■□□□□ 0.65
VARS2-211ENST00000541562 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
VARS2-211ENST00000541562 TSPYL6Q8N831 410 aa19.14■□□□□ 0.65
VARS2-211ENST00000541562 MIS18AQ9NYP9 233 aa19.14■□□□□ 0.65
VARS2-211ENST00000541562 YEATS2Q9ULM3 1422 aa19.13■□□□□ 0.65
VARS2-211ENST00000541562 ATAD2Q6PL18 1390 aa19.13■□□□□ 0.65
VARS2-211ENST00000541562 NECTIN2Q92692 538 aa19.13■□□□□ 0.65
VARS2-211ENST00000541562 SPHKAPQ2M3C7 1700 aa19.13■□□□□ 0.65
VARS2-211ENST00000541562 ESF1Q9H501 851 aaKnown RBP19.12■□□□□ 0.65
VARS2-211ENST00000541562 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
VARS2-211ENST00000541562 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
VARS2-211ENST00000541562 ABCA6Q8N139 1617 aa19.12■□□□□ 0.65
VARS2-211ENST00000541562 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
VARS2-211ENST00000541562 TRIM35Q9UPQ4 493 aa19.12■□□□□ 0.65
VARS2-211ENST00000541562 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
VARS2-211ENST00000541562 GSE1Q14687 1217 aa19.11■□□□□ 0.65
VARS2-211ENST00000541562 UPF2Q9HAU5 1272 aaKnown RBP19.11■□□□□ 0.65
VARS2-211ENST00000541562 TERF2IPQ9NYB0 399 aa19.11■□□□□ 0.65
VARS2-211ENST00000541562 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
VARS2-211ENST00000541562 INSRP06213 1382 aa19.1■□□□□ 0.65
VARS2-211ENST00000541562 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
VARS2-211ENST00000541562 CEP152O94986 1710 aa19.09■□□□□ 0.65
VARS2-211ENST00000541562 MVPQ14764 893 aaKnown RBP19.09■□□□□ 0.65
VARS2-211ENST00000541562 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
VARS2-211ENST00000541562 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.65
VARS2-211ENST00000541562 CEBPAP49715 358 aaPredicted RBP19.08■□□□□ 0.64
VARS2-211ENST00000541562 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
VARS2-211ENST00000541562 USP19O94966 1318 aa19.07■□□□□ 0.64
VARS2-211ENST00000541562 KDM5AP29375 1690 aaKnown RBP19.07■□□□□ 0.64
VARS2-211ENST00000541562 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
VARS2-211ENST00000541562 PMFBP1Q8TBY8 1022 aa19.06■□□□□ 0.64
VARS2-211ENST00000541562 SLC26A8Q96RN1 970 aa19.06■□□□□ 0.64
VARS2-211ENST00000541562 POLR3AO14802 1390 aaPredicted RBP19.06■□□□□ 0.64
VARS2-211ENST00000541562 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
VARS2-211ENST00000541562 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
VARS2-211ENST00000541562 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
VARS2-211ENST00000541562 ZNF518AQ6AHZ1 1483 aa19.06■□□□□ 0.64
VARS2-211ENST00000541562 SYNMO15061 1565 aa19.05■□□□□ 0.64
VARS2-211ENST00000541562 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
VARS2-211ENST00000541562 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
VARS2-211ENST00000541562 PPRC1Q5VV67 1664 aaKnown RBP19.04■□□□□ 0.64
VARS2-211ENST00000541562 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
VARS2-211ENST00000541562 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
VARS2-211ENST00000541562 ATF7IPQ6VMQ6 1270 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms