RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 G3V3G9 751 aa7.31□□□□□ -1.24
SPARCL1-209ENST00000541496 RYDENQ9NUL5 291 aaKnown RBP7.31□□□□□ -1.24
SPARCL1-209ENST00000541496 PLA2R1Q13018 1463 aa7.3□□□□□ -1.24
SPARCL1-209ENST00000541496 SLC52A1Q9NWF4 448 aa7.3□□□□□ -1.24
SPARCL1-209ENST00000541496 ADAMTSL3P82987 1691 aa7.3□□□□□ -1.24
SPARCL1-209ENST00000541496 ZC3H13Q5T200 1668 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-209ENST00000541496 PTPRMP28827 1452 aa7.3□□□□□ -1.24
SPARCL1-209ENST00000541496 ERVK-7P63135 1459 aa7.3□□□□□ -1.24
SPARCL1-209ENST00000541496 FBXO31Q5XUX0 539 aaPredicted RBP7.29□□□□□ -1.24
SPARCL1-209ENST00000541496 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-209ENST00000541496 TET3O43151 1660 aa7.28□□□□□ -1.24
SPARCL1-209ENST00000541496 CEBPAP49715 358 aaPredicted RBP7.28□□□□□ -1.24
SPARCL1-209ENST00000541496 TNRQ92752 1358 aa7.28□□□□□ -1.24
SPARCL1-209ENST00000541496 SPATA31D1Q6ZQQ2 1576 aa7.28□□□□□ -1.24
SPARCL1-209ENST00000541496 C3orf67Q6ZVT6 689 aa7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 CCER1Q8TC90 406 aaPredicted RBP7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 PHF8Q9UPP1 1060 aa7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 NLRP1Q9C000 1473 aa7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 MADDQ8WXG6 1647 aa7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 TRPM2O94759 1503 aa7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 CCDC144AA2RUR9 1427 aa7.27□□□□□ -1.25
SPARCL1-209ENST00000541496 MROH2AA6NES4 1674 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 IDI1Q13907 227 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 FBXO22Q8NEZ5 403 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 MFRPQ9BY79 579 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 PCDH10Q9P2E7 1040 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 CAMSAP1Q5T5Y3 1602 aa7.26□□□□□ -1.25
SPARCL1-209ENST00000541496 ST18O60284 1047 aa7.25□□□□□ -1.25
SPARCL1-209ENST00000541496 TIMELESSQ9UNS1 1208 aa7.25□□□□□ -1.25
SPARCL1-209ENST00000541496 MS4A4AQ96JQ5 239 aa7.24□□□□□ -1.25
SPARCL1-209ENST00000541496 STAC3Q96MF2 364 aa7.24□□□□□ -1.25
SPARCL1-209ENST00000541496 E9PCH4 1651 aa7.24□□□□□ -1.25
SPARCL1-209ENST00000541496 CLTCQ00610 1675 aaKnown RBP7.24□□□□□ -1.25
SPARCL1-209ENST00000541496 SPATA31E1Q6ZUB1 1445 aa7.24□□□□□ -1.25
SPARCL1-209ENST00000541496 SYNMO15061 1565 aa7.24□□□□□ -1.25
SPARCL1-209ENST00000541496 TMEM121BQ9BXQ6 578 aaPredicted RBP7.23□□□□□ -1.25
SPARCL1-209ENST00000541496 NEURL4Q96JN8 1562 aa7.23□□□□□ -1.25
SPARCL1-209ENST00000541496 RPGRIP1LQ68CZ1 1315 aa7.23□□□□□ -1.25
SPARCL1-209ENST00000541496 A2ML1A8K2U0 1454 aa7.23□□□□□ -1.25
SPARCL1-209ENST00000541496 CEP152O94986 1710 aa7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 UHRF1BP1Q6BDS2 1440 aa7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 DPY19L2Q6NUT2 758 aa7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 THEMISQ8N1K5 641 aaPredicted RBP7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 SIN3AQ96ST3 1273 aa7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 FER1L4A9Z1Z3 1794 aa7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 RIMS1Q86UR5 1692 aaKnown RBP7.22□□□□□ -1.25
SPARCL1-209ENST00000541496 UGGT1Q9NYU2 1555 aa7.21□□□□□ -1.25
SPARCL1-209ENST00000541496 PIK3C2BO00750 1634 aa7.21□□□□□ -1.26
SPARCL1-209ENST00000541496 SNPHO15079 494 aa7.21□□□□□ -1.26
SPARCL1-209ENST00000541496 CDAN1Q8IWY9 1227 aa7.21□□□□□ -1.26
SPARCL1-209ENST00000541496 MICALL2Q8IY33 904 aa7.21□□□□□ -1.26
SPARCL1-209ENST00000541496 C3P01024 1663 aa7.21□□□□□ -1.26
SPARCL1-209ENST00000541496 ADGRB3O60242 1522 aa7.21□□□□□ -1.26
SPARCL1-209ENST00000541496 TMEM2Q9UHN6 1383 aa7.2□□□□□ -1.26
SPARCL1-209ENST00000541496 PREX1Q8TCU6 1659 aa7.2□□□□□ -1.26
SPARCL1-209ENST00000541496 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
SPARCL1-209ENST00000541496 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
SPARCL1-209ENST00000541496 L3MBTL2Q969R5 705 aa7.2□□□□□ -1.26
SPARCL1-209ENST00000541496 CLTCL1P53675 1640 aa7.19□□□□□ -1.26
SPARCL1-209ENST00000541496 ZFYVE9O95405 1425 aa7.19□□□□□ -1.26
SPARCL1-209ENST00000541496 ARHGAP23Q9P227 1491 aa7.19□□□□□ -1.26
SPARCL1-209ENST00000541496 HDGFP51858 240 aaKnown RBP7.19□□□□□ -1.26
SPARCL1-209ENST00000541496 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.19□□□□□ -1.26
SPARCL1-209ENST00000541496 TONSLQ96HA7 1378 aa7.19□□□□□ -1.26
SPARCL1-209ENST00000541496 LMTK3Q96Q04 1460 aa7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 SLIT1O75093 1534 aa7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 CEP170BQ9Y4F5 1589 aaPredicted RBP7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 NKX1-1Q15270 411 aaPredicted RBP7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 RGL3Q3MIN7 710 aa7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 MARVELD3Q96A59 401 aa7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 SPHKAPQ2M3C7 1700 aa7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 RIMS2Q9UQ26 1411 aa7.18□□□□□ -1.26
SPARCL1-209ENST00000541496 MYOM2P54296 1465 aa7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 ZEB1P37275 1124 aaPredicted RBP7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 ZNF326Q5BKZ1 582 aaKnown RBP7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 DCAF11Q8TEB1 546 aa7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 EID1Q9Y6B2 187 aa7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
SPARCL1-209ENST00000541496 TMEM131LA2VDJ0 1609 aa7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 MYO3AQ8NEV4 1616 aa7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 KDM5AP29375 1690 aaKnown RBP7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 PPP1R15AO75807 674 aaPredicted RBP7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 LTKP29376 864 aa7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 TXNDC2Q86VQ3 553 aa7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 ANKLE2Q86XL3 938 aa7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 SCAF11Q99590 1463 aaKnown RBP7.16□□□□□ -1.26
SPARCL1-209ENST00000541496 ADGRF5Q8IZF2 1346 aa7.15□□□□□ -1.26
SPARCL1-209ENST00000541496 PLEKHG1Q9ULL1 1385 aa7.15□□□□□ -1.26
SPARCL1-209ENST00000541496 PRAG1Q86YV5 1406 aa7.15□□□□□ -1.27
SPARCL1-209ENST00000541496 NEXMIFQ5QGS0 1516 aa7.15□□□□□ -1.27
SPARCL1-209ENST00000541496 ZNF142P52746 1687 aaPredicted RBP7.15□□□□□ -1.27
SPARCL1-209ENST00000541496 GTPBP6O43824 516 aaPredicted RBP7.14□□□□□ -1.27
SPARCL1-209ENST00000541496 MED14O60244 1454 aa7.14□□□□□ -1.27
SPARCL1-209ENST00000541496 PIK3C2GO75747 1445 aa7.14□□□□□ -1.27
SPARCL1-209ENST00000541496 HSPA2P54652 639 aa7.13□□□□□ -1.27
SPARCL1-209ENST00000541496 C14orf93Q9H972 538 aaKnown RBP7.13□□□□□ -1.27
SPARCL1-209ENST00000541496 KDM2AQ9Y2K7 1162 aa7.13□□□□□ -1.27
SPARCL1-209ENST00000541496 TBX22Q9Y458 520 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms