RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 DAXXQ9UER7 740 aaPredicted RBP9.48□□□□□ -0.89
KNTC1-211ENST00000541427 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
KNTC1-211ENST00000541427 HIC1Q14526 733 aa9.47□□□□□ -0.89
KNTC1-211ENST00000541427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.47□□□□□ -0.89
KNTC1-211ENST00000541427 SNIP1Q8TAD8 396 aaKnown RBP9.47□□□□□ -0.89
KNTC1-211ENST00000541427 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
KNTC1-211ENST00000541427 WNT7AO00755 349 aa9.46□□□□□ -0.9
KNTC1-211ENST00000541427 TERTO14746 1132 aaKnown RBP9.46□□□□□ -0.9
KNTC1-211ENST00000541427 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
KNTC1-211ENST00000541427 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
KNTC1-211ENST00000541427 SMYD5Q6GMV2 418 aa9.45□□□□□ -0.9
KNTC1-211ENST00000541427 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
KNTC1-211ENST00000541427 FECHP22830 423 aa9.44□□□□□ -0.9
KNTC1-211ENST00000541427 GCGRP47871 477 aa9.44□□□□□ -0.9
KNTC1-211ENST00000541427 MSS51Q4VC12 460 aa9.44□□□□□ -0.9
KNTC1-211ENST00000541427 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
KNTC1-211ENST00000541427 J3QL48 77 aa9.43□□□□□ -0.9
KNTC1-211ENST00000541427 TRIM32Q13049 653 aa9.43□□□□□ -0.9
KNTC1-211ENST00000541427 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
KNTC1-211ENST00000541427 NLRP7Q8WX94 980 aa9.43□□□□□ -0.9
KNTC1-211ENST00000541427 MRGPRX2Q96LB1 330 aa9.43□□□□□ -0.9
KNTC1-211ENST00000541427 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
KNTC1-211ENST00000541427 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
KNTC1-211ENST00000541427 HPS1Q92902 700 aa9.4□□□□□ -0.9
KNTC1-211ENST00000541427 GNPATO15228 680 aa9.39□□□□□ -0.91
KNTC1-211ENST00000541427 KIFC2Q96AC6 838 aa9.38□□□□□ -0.91
KNTC1-211ENST00000541427 GPR37O15354 613 aa9.37□□□□□ -0.91
KNTC1-211ENST00000541427 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
KNTC1-211ENST00000541427 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
KNTC1-211ENST00000541427 MMP16P51512 607 aa9.36□□□□□ -0.91
KNTC1-211ENST00000541427 GPIHBP1Q8IV16 184 aa9.36□□□□□ -0.91
KNTC1-211ENST00000541427 Q3C1V9 767 aa9.35□□□□□ -0.91
KNTC1-211ENST00000541427 PHOX2BQ99453 314 aa9.35□□□□□ -0.91
KNTC1-211ENST00000541427 FAM181BA6NEQ2 426 aa9.33□□□□□ -0.92
KNTC1-211ENST00000541427 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
KNTC1-211ENST00000541427 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
KNTC1-211ENST00000541427 ZC3H15Q8WU90 426 aaKnown RBP9.33□□□□□ -0.92
KNTC1-211ENST00000541427 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
KNTC1-211ENST00000541427 SKOR1P84550 965 aa9.31□□□□□ -0.92
KNTC1-211ENST00000541427 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
KNTC1-211ENST00000541427 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
KNTC1-211ENST00000541427 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
KNTC1-211ENST00000541427 GMPRP36959 345 aa9.3□□□□□ -0.92
KNTC1-211ENST00000541427 ALDH1A1P00352 501 aa9.29□□□□□ -0.92
KNTC1-211ENST00000541427 WNT7BP56706 349 aa9.29□□□□□ -0.92
KNTC1-211ENST00000541427 ZSCAN1Q8NBB4 408 aa9.28□□□□□ -0.92
KNTC1-211ENST00000541427 ZMYND10O75800 440 aa9.27□□□□□ -0.93
KNTC1-211ENST00000541427 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
KNTC1-211ENST00000541427 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
KNTC1-211ENST00000541427 IRF7Q92985 503 aa9.26□□□□□ -0.93
KNTC1-211ENST00000541427 KDM4AO75164 1064 aa9.25□□□□□ -0.93
KNTC1-211ENST00000541427 BMP1P13497 986 aa9.25□□□□□ -0.93
KNTC1-211ENST00000541427 CD46P15529 392 aa9.25□□□□□ -0.93
KNTC1-211ENST00000541427 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
KNTC1-211ENST00000541427 VEGFBP49765 207 aa9.24□□□□□ -0.93
KNTC1-211ENST00000541427 TRIM46Q7Z4K8 759 aa9.24□□□□□ -0.93
KNTC1-211ENST00000541427 NPAS3Q8IXF0 933 aa9.24□□□□□ -0.93
KNTC1-211ENST00000541427 LOC100996750A0A140TA64 210 aa9.23□□□□□ -0.93
KNTC1-211ENST00000541427 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
KNTC1-211ENST00000541427 HLA-CQ95604 372 aa9.23□□□□□ -0.93
KNTC1-211ENST00000541427 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
KNTC1-211ENST00000541427 CAPN5O15484 640 aaPredicted RBP9.22□□□□□ -0.93
KNTC1-211ENST00000541427 H3BM21 787 aa9.21□□□□□ -0.94
KNTC1-211ENST00000541427 SIAH2O43255 324 aa9.21□□□□□ -0.94
KNTC1-211ENST00000541427 WASF2Q9Y6W5 498 aa9.2□□□□□ -0.94
KNTC1-211ENST00000541427 USP46P62068 366 aa9.19□□□□□ -0.94
KNTC1-211ENST00000541427 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
KNTC1-211ENST00000541427 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
KNTC1-211ENST00000541427 ERBB4Q15303 1308 aa9.19□□□□□ -0.94
KNTC1-211ENST00000541427 JUNDP17535 347 aa9.18□□□□□ -0.94
KNTC1-211ENST00000541427 HOXA2O43364 376 aa9.17□□□□□ -0.94
KNTC1-211ENST00000541427 PTCRAQ6ISU1 281 aaPredicted RBP9.17□□□□□ -0.94
KNTC1-211ENST00000541427 IRF6O14896 467 aa9.16□□□□□ -0.94
KNTC1-211ENST00000541427 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
KNTC1-211ENST00000541427 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
KNTC1-211ENST00000541427 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
KNTC1-211ENST00000541427 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
KNTC1-211ENST00000541427 CCDC102AQ96A19 550 aa9.15□□□□□ -0.94
KNTC1-211ENST00000541427 ZFP42Q96MM3 310 aa9.15□□□□□ -0.94
KNTC1-211ENST00000541427 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
KNTC1-211ENST00000541427 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
KNTC1-211ENST00000541427 SH3BP2P78314 561 aa9.13□□□□□ -0.95
KNTC1-211ENST00000541427 MDM2Q00987 491 aaPredicted RBP9.13□□□□□ -0.95
KNTC1-211ENST00000541427 RETREG3Q86VR2 466 aa9.11□□□□□ -0.95
KNTC1-211ENST00000541427 AK7Q96M32 723 aa9.09□□□□□ -0.95
KNTC1-211ENST00000541427 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
KNTC1-211ENST00000541427 TRIM66O15016 1216 aa9.08□□□□□ -0.96
KNTC1-211ENST00000541427 SUZ12Q15022 739 aaKnown RBP9.08□□□□□ -0.96
KNTC1-211ENST00000541427 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
KNTC1-211ENST00000541427 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
KNTC1-211ENST00000541427 SOBPA7XYQ1 873 aa9.06□□□□□ -0.96
KNTC1-211ENST00000541427 MS4A1P11836 297 aa9.06□□□□□ -0.96
KNTC1-211ENST00000541427 NNTQ13423 1086 aa9.06□□□□□ -0.96
KNTC1-211ENST00000541427 SCARF1Q14162 830 aa9.06□□□□□ -0.96
KNTC1-211ENST00000541427 PURBQ96QR8 312 aaKnown RBP9.06□□□□□ -0.96
KNTC1-211ENST00000541427 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
KNTC1-211ENST00000541427 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
KNTC1-211ENST00000541427 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
KNTC1-211ENST00000541427 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
KNTC1-211ENST00000541427 BAP1Q92560 729 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms