RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
TRERF1-205ENST00000541110 EVC2Q86UK5 1308 aa12.06□□□□□ -0.48
TRERF1-205ENST00000541110 CUX2O14529 1486 aa12.06□□□□□ -0.48
TRERF1-205ENST00000541110 SART3Q15020 963 aaKnown RBP12.06□□□□□ -0.48
TRERF1-205ENST00000541110 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
TRERF1-205ENST00000541110 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
TRERF1-205ENST00000541110 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
TRERF1-205ENST00000541110 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
TRERF1-205ENST00000541110 TSPYL4Q9UJ04 414 aa12.05□□□□□ -0.48
TRERF1-205ENST00000541110 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
TRERF1-205ENST00000541110 ACBD3Q9H3P7 528 aa12.05□□□□□ -0.48
TRERF1-205ENST00000541110 TRIM21P19474 475 aaKnown RBP12.05□□□□□ -0.48
TRERF1-205ENST00000541110 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
TRERF1-205ENST00000541110 ATP2B1P20020 1258 aa12.05□□□□□ -0.48
TRERF1-205ENST00000541110 MPHOSPH9Q99550 1183 aa12.04□□□□□ -0.48
TRERF1-205ENST00000541110 TXLNAP40222 546 aa12.04□□□□□ -0.48
TRERF1-205ENST00000541110 CNNM1Q9NRU3 951 aa12.04□□□□□ -0.48
TRERF1-205ENST00000541110 REC8O95072 547 aa12.04□□□□□ -0.48
TRERF1-205ENST00000541110 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
TRERF1-205ENST00000541110 MNS1Q8NEH6 495 aa12.04□□□□□ -0.48
TRERF1-205ENST00000541110 DESP17661 470 aa12.04□□□□□ -0.48
TRERF1-205ENST00000541110 CA8P35219 290 aa12.03□□□□□ -0.48
TRERF1-205ENST00000541110 CCDC73Q6ZRK6 1079 aa12.03□□□□□ -0.48
TRERF1-205ENST00000541110 ERC2O15083 957 aa12.03□□□□□ -0.48
TRERF1-205ENST00000541110 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
TRERF1-205ENST00000541110 HSP90B2PQ58FF3 399 aa12.03□□□□□ -0.48
TRERF1-205ENST00000541110 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
TRERF1-205ENST00000541110 SEPT11Q9NVA2 429 aaKnown RBP12.03□□□□□ -0.48
TRERF1-205ENST00000541110 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
TRERF1-205ENST00000541110 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 WDHD1O75717 1129 aaPredicted RBP12.02□□□□□ -0.49
TRERF1-205ENST00000541110 HSP90AA2PQ14568 343 aaPredicted RBP12.02□□□□□ -0.49
TRERF1-205ENST00000541110 NOM1Q5C9Z4 860 aaKnown RBP12.02□□□□□ -0.49
TRERF1-205ENST00000541110 ROCK1Q13464 1354 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 H0YHG0 523 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 FAM161AQ3B820 660 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 TTC39AQ5SRH9 613 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 NAT10Q9H0A0 1025 aaKnown RBP12.02□□□□□ -0.49
TRERF1-205ENST00000541110 SETD5Q9C0A6 1442 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 ERLIN2O94905 339 aa12.02□□□□□ -0.49
TRERF1-205ENST00000541110 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
TRERF1-205ENST00000541110 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
TRERF1-205ENST00000541110 GBP2P32456 591 aaPredicted RBP12.01□□□□□ -0.49
TRERF1-205ENST00000541110 RBM19Q9Y4C8 960 aaKnown RBP12.01□□□□□ -0.49
TRERF1-205ENST00000541110 SCLT1Q96NL6 688 aa12.01□□□□□ -0.49
TRERF1-205ENST00000541110 ZKSCAN2Q63HK3 967 aa12.01□□□□□ -0.49
TRERF1-205ENST00000541110 DRC1Q96MC2 740 aa12.01□□□□□ -0.49
TRERF1-205ENST00000541110 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
TRERF1-205ENST00000541110 ERC1Q8IUD2 1116 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 UACAQ9BZF9 1416 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 NINLQ9Y2I6 1382 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 SKOR2Q2VWA4 1001 aaPredicted RBP12□□□□□ -0.49
TRERF1-205ENST00000541110 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 ZNF76P36508 570 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 PSMD1Q99460 953 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 HMOX1P09601 288 aa12□□□□□ -0.49
TRERF1-205ENST00000541110 SSR1P43307 286 aaKnown RBP12□□□□□ -0.49
TRERF1-205ENST00000541110 SMARCE1Q969G3 411 aa11.99□□□□□ -0.49
TRERF1-205ENST00000541110 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
TRERF1-205ENST00000541110 RIPK4P57078 832 aa11.99□□□□□ -0.49
TRERF1-205ENST00000541110 ARGLU1Q9NWB6 273 aaPredicted RBP11.99□□□□□ -0.49
TRERF1-205ENST00000541110 FILIP1LQ4L180 1135 aa11.98□□□□□ -0.49
TRERF1-205ENST00000541110 SDF4Q9BRK5 362 aa11.98□□□□□ -0.49
TRERF1-205ENST00000541110 PANK3Q9H999 370 aa11.98□□□□□ -0.49
TRERF1-205ENST00000541110 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
TRERF1-205ENST00000541110 SMC2O95347 1197 aa11.98□□□□□ -0.49
TRERF1-205ENST00000541110 ESCO1Q5FWF5 840 aa11.98□□□□□ -0.49
TRERF1-205ENST00000541110 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
TRERF1-205ENST00000541110 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
TRERF1-205ENST00000541110 DEF6Q9H4E7 631 aa11.97□□□□□ -0.49
TRERF1-205ENST00000541110 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
TRERF1-205ENST00000541110 EZRP15311 586 aaKnown RBP11.96□□□□□ -0.49
TRERF1-205ENST00000541110 CCER2I3L3R5 266 aa11.96□□□□□ -0.49
TRERF1-205ENST00000541110 TAX1BP1Q86VP1 789 aa11.96□□□□□ -0.49
TRERF1-205ENST00000541110 DNAI2Q9GZS0 605 aa11.96□□□□□ -0.49
TRERF1-205ENST00000541110 CNTROBQ8N137 903 aa11.96□□□□□ -0.49
TRERF1-205ENST00000541110 ANAPC15P60006 121 aa11.96□□□□□ -0.49
TRERF1-205ENST00000541110 CCDC181Q5TID7 509 aa11.96□□□□□ -0.5
TRERF1-205ENST00000541110 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.5
TRERF1-205ENST00000541110 FSD1Q9BTV5 496 aa11.96□□□□□ -0.5
TRERF1-205ENST00000541110 GOLGA6L10A6NI86 522 aa11.96□□□□□ -0.5
TRERF1-205ENST00000541110 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 CENPHQ9H3R5 247 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
TRERF1-205ENST00000541110 GRM1Q13255 1194 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 PSMA5P28066 241 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 CEBPZQ03701 1054 aaKnown RBP11.95□□□□□ -0.5
TRERF1-205ENST00000541110 AXDND1Q5T1B0 1012 aaPredicted RBP11.95□□□□□ -0.5
TRERF1-205ENST00000541110 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
TRERF1-205ENST00000541110 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
TRERF1-205ENST00000541110 FAM69CQ0P6D2 419 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 TSPYL1Q9H0U9 437 aa11.95□□□□□ -0.5
TRERF1-205ENST00000541110 USP5P45974 858 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 SOGA3Q5TF21 947 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 ERCC4Q92889 916 aaPredicted RBP11.94□□□□□ -0.5
TRERF1-205ENST00000541110 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 FMNL2Q96PY5 1086 aa11.94□□□□□ -0.5
TRERF1-205ENST00000541110 ZNHIT6Q9NWK9 470 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms