RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 NUTM2FA1L443 756 aa20.67■□□□□ 0.9
LTBR-209ENST00000541102 SOCS7O14512 581 aa20.67■□□□□ 0.9
LTBR-209ENST00000541102 RGS17Q9UGC6 210 aaPredicted RBP20.66■□□□□ 0.9
LTBR-209ENST00000541102 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
LTBR-209ENST00000541102 ESCO1Q5FWF5 840 aa20.65■□□□□ 0.9
LTBR-209ENST00000541102 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
LTBR-209ENST00000541102 LRRC59Q96AG4 307 aaKnown RBP20.64■□□□□ 0.89
LTBR-209ENST00000541102 STAC3Q96MF2 364 aa20.64■□□□□ 0.89
LTBR-209ENST00000541102 NUTM2BA6NNL0 878 aaPredicted RBP20.63■□□□□ 0.89
LTBR-209ENST00000541102 NUTM2EB1AL46 878 aaPredicted RBP20.63■□□□□ 0.89
LTBR-209ENST00000541102 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
LTBR-209ENST00000541102 NUTM2AQ8IVF1 878 aaPredicted RBP20.63■□□□□ 0.89
LTBR-209ENST00000541102 PRAM1Q96QH2 718 aa20.63■□□□□ 0.89
LTBR-209ENST00000541102 POGKQ9P215 609 aa20.63■□□□□ 0.89
LTBR-209ENST00000541102 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
LTBR-209ENST00000541102 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
LTBR-209ENST00000541102 LAMC1P11047 1609 aa20.61■□□□□ 0.89
LTBR-209ENST00000541102 TRAK1Q9UPV9 953 aa20.61■□□□□ 0.89
LTBR-209ENST00000541102 KNDC1Q76NI1 1749 aa20.61■□□□□ 0.89
LTBR-209ENST00000541102 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
LTBR-209ENST00000541102 CDC42BPGQ6DT37 1551 aa20.59■□□□□ 0.89
LTBR-209ENST00000541102 FOXO3O43524 673 aa20.57■□□□□ 0.88
LTBR-209ENST00000541102 POTEAQ6S8J7 498 aa20.57■□□□□ 0.88
LTBR-209ENST00000541102 LRP6O75581 1613 aa20.56■□□□□ 0.88
LTBR-209ENST00000541102 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
LTBR-209ENST00000541102 SHPRHQ149N8 1683 aa20.56■□□□□ 0.88
LTBR-209ENST00000541102 SOS2Q07890 1332 aaPredicted RBP20.55■□□□□ 0.88
LTBR-209ENST00000541102 ADGRB1O14514 1584 aa20.55■□□□□ 0.88
LTBR-209ENST00000541102 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
LTBR-209ENST00000541102 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
LTBR-209ENST00000541102 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
LTBR-209ENST00000541102 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
LTBR-209ENST00000541102 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
LTBR-209ENST00000541102 DLC1Q96QB1 1528 aa20.52■□□□□ 0.87
LTBR-209ENST00000541102 L3MBTL2Q969R5 705 aa20.51■□□□□ 0.87
LTBR-209ENST00000541102 FMN2Q9NZ56 1722 aa20.5■□□□□ 0.87
LTBR-209ENST00000541102 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
LTBR-209ENST00000541102 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
LTBR-209ENST00000541102 NBPF1Q3BBV0 1214 aa20.48■□□□□ 0.87
LTBR-209ENST00000541102 ZNF772Q68DY9 489 aaPredicted RBP20.48■□□□□ 0.87
LTBR-209ENST00000541102 KRT28Q7Z3Y7 464 aa20.47■□□□□ 0.87
LTBR-209ENST00000541102 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
LTBR-209ENST00000541102 PXDNQ92626 1479 aa20.45■□□□□ 0.86
LTBR-209ENST00000541102 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
LTBR-209ENST00000541102 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
LTBR-209ENST00000541102 AFF2P51816 1311 aa20.45■□□□□ 0.86
LTBR-209ENST00000541102 WASLO00401 505 aaPredicted RBP20.44■□□□□ 0.86
LTBR-209ENST00000541102 NGLY1Q96IV0 654 aa20.44■□□□□ 0.86
LTBR-209ENST00000541102 RGPD8O14715 1765 aaPredicted RBP20.44■□□□□ 0.86
LTBR-209ENST00000541102 PSME1Q06323 249 aa20.43■□□□□ 0.86
LTBR-209ENST00000541102 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
LTBR-209ENST00000541102 ANKARQ7Z5J8 1434 aa20.41■□□□□ 0.86
LTBR-209ENST00000541102 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
LTBR-209ENST00000541102 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
LTBR-209ENST00000541102 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
LTBR-209ENST00000541102 PRR36Q9H6K5 1346 aa20.4■□□□□ 0.86
LTBR-209ENST00000541102 KIAA1210Q9ULL0 1709 aa20.39■□□□□ 0.86
LTBR-209ENST00000541102 ADGRB2O60241 1585 aa20.39■□□□□ 0.85
LTBR-209ENST00000541102 EIF3AQ14152 1382 aaKnown RBP20.39■□□□□ 0.85
LTBR-209ENST00000541102 ARHGEF28Q8N1W1 1705 aaKnown RBP20.39■□□□□ 0.85
LTBR-209ENST00000541102 RXRBP28702 533 aa20.38■□□□□ 0.85
LTBR-209ENST00000541102 CDK19Q9BWU1 502 aa20.38■□□□□ 0.85
LTBR-209ENST00000541102 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
LTBR-209ENST00000541102 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
LTBR-209ENST00000541102 USP32Q8NFA0 1604 aa20.37■□□□□ 0.85
LTBR-209ENST00000541102 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
LTBR-209ENST00000541102 CLSPNQ9HAW4 1339 aa20.35■□□□□ 0.85
LTBR-209ENST00000541102 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
LTBR-209ENST00000541102 HAP1P54257 671 aaPredicted RBP20.34■□□□□ 0.85
LTBR-209ENST00000541102 CABLES1Q8TDN4 633 aa20.34■□□□□ 0.85
LTBR-209ENST00000541102 USP21Q9UK80 565 aa20.34■□□□□ 0.85
LTBR-209ENST00000541102 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
LTBR-209ENST00000541102 GPRASP1Q5JY77 1395 aa20.34■□□□□ 0.85
LTBR-209ENST00000541102 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.85
LTBR-209ENST00000541102 TNS3Q68CZ2 1445 aa20.32■□□□□ 0.84
LTBR-209ENST00000541102 SBNO1A3KN83 1393 aa20.32■□□□□ 0.84
LTBR-209ENST00000541102 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
LTBR-209ENST00000541102 NBPF8Q3BBV2 869 aa20.31■□□□□ 0.84
LTBR-209ENST00000541102 FNBP4Q8N3X1 1017 aaPredicted RBP20.31■□□□□ 0.84
LTBR-209ENST00000541102 PAK3O75914 559 aaPredicted RBP20.3■□□□□ 0.84
LTBR-209ENST00000541102 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
LTBR-209ENST00000541102 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
LTBR-209ENST00000541102 SRPK2P78362 688 aaKnown RBP20.29■□□□□ 0.84
LTBR-209ENST00000541102 CCDC61Q9Y6R9 512 aa20.28■□□□□ 0.84
LTBR-209ENST00000541102 ARHGEF10O15013 1369 aa20.28■□□□□ 0.84
LTBR-209ENST00000541102 ATP7BP35670 1465 aa20.27■□□□□ 0.84
LTBR-209ENST00000541102 CABP2Q9NPB3 220 aa20.27■□□□□ 0.84
LTBR-209ENST00000541102 TRPC5Q9UL62 973 aaPredicted RBP20.27■□□□□ 0.84
LTBR-209ENST00000541102 TRPM1Q7Z4N2 1603 aa20.26■□□□□ 0.83
LTBR-209ENST00000541102 ACEP12821 1306 aa20.25■□□□□ 0.83
LTBR-209ENST00000541102 PLEKHG3A1L390 1219 aa20.22■□□□□ 0.83
LTBR-209ENST00000541102 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
LTBR-209ENST00000541102 BCL9LQ86UU0 1499 aa20.22■□□□□ 0.83
LTBR-209ENST00000541102 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
LTBR-209ENST00000541102 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
LTBR-209ENST00000541102 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
LTBR-209ENST00000541102 QRICH2Q9H0J4 1663 aa20.21■□□□□ 0.83
LTBR-209ENST00000541102 TRPM3Q9HCF6 1732 aaPredicted RBP20.21■□□□□ 0.83
LTBR-209ENST00000541102 ATRNO75882 1429 aa20.2■□□□□ 0.82
LTBR-209ENST00000541102 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms