RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PHLPP1O60346 1717 aa24.44■■□□□ 1.5
CD9-209ENST00000540891 PRAM1Q96QH2 718 aa24.43■■□□□ 1.5
CD9-209ENST00000540891 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
CD9-209ENST00000540891 TRAK1Q9UPV9 953 aa24.43■■□□□ 1.5
CD9-209ENST00000540891 KIAA1210Q9ULL0 1709 aa24.43■■□□□ 1.5
CD9-209ENST00000540891 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
CD9-209ENST00000540891 NBPF1Q3BBV0 1214 aa24.39■■□□□ 1.49
CD9-209ENST00000540891 MED1Q15648 1581 aaPredicted RBP24.38■■□□□ 1.49
CD9-209ENST00000540891 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.49
CD9-209ENST00000540891 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
CD9-209ENST00000540891 NHSL1Q5SYE7 1610 aa24.38■■□□□ 1.49
CD9-209ENST00000540891 FMN2Q9NZ56 1722 aa24.36■■□□□ 1.49
CD9-209ENST00000540891 POGKQ9P215 609 aa24.36■■□□□ 1.49
CD9-209ENST00000540891 ARHGEF28Q8N1W1 1705 aaKnown RBP24.35■■□□□ 1.49
CD9-209ENST00000540891 DISP3Q9P2K9 1392 aa24.35■■□□□ 1.49
CD9-209ENST00000540891 DDX17Q92841 729 aaKnown RBP24.35■■□□□ 1.49
CD9-209ENST00000540891 ADGRB2O60241 1585 aa24.33■■□□□ 1.49
CD9-209ENST00000540891 NUTM2FA1L443 756 aa24.33■■□□□ 1.49
CD9-209ENST00000540891 JCADQ9P266 1359 aa24.32■■□□□ 1.48
CD9-209ENST00000540891 TRPM1Q7Z4N2 1603 aa24.32■■□□□ 1.48
CD9-209ENST00000540891 NBPF8Q3BBV2 869 aa24.3■■□□□ 1.48
CD9-209ENST00000540891 ESCO1Q5FWF5 840 aa24.3■■□□□ 1.48
CD9-209ENST00000540891 HIRIP3Q9BW71 556 aaPredicted RBP24.29■■□□□ 1.48
CD9-209ENST00000540891 MINK1Q8N4C8 1332 aaPredicted RBP24.29■■□□□ 1.48
CD9-209ENST00000540891 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
CD9-209ENST00000540891 SOS2Q07890 1332 aaPredicted RBP24.27■■□□□ 1.48
CD9-209ENST00000540891 USP32Q8NFA0 1604 aa24.26■■□□□ 1.47
CD9-209ENST00000540891 SHPRHQ149N8 1683 aa24.26■■□□□ 1.47
CD9-209ENST00000540891 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
CD9-209ENST00000540891 WASLO00401 505 aaPredicted RBP24.23■■□□□ 1.47
CD9-209ENST00000540891 ANKARQ7Z5J8 1434 aa24.23■■□□□ 1.47
CD9-209ENST00000540891 PXDNQ92626 1479 aa24.22■■□□□ 1.47
CD9-209ENST00000540891 ROCK2O75116 1388 aaKnown RBP24.22■■□□□ 1.47
CD9-209ENST00000540891 FOXO3O43524 673 aa24.22■■□□□ 1.47
CD9-209ENST00000540891 LRRC59Q96AG4 307 aaKnown RBP24.22■■□□□ 1.47
CD9-209ENST00000540891 NPHP3Q7Z494 1330 aa24.21■■□□□ 1.47
CD9-209ENST00000540891 PRR36Q9H6K5 1346 aa24.21■■□□□ 1.47
CD9-209ENST00000540891 KIF1AQ12756 1690 aa24.21■■□□□ 1.47
CD9-209ENST00000540891 LRP6O75581 1613 aa24.21■■□□□ 1.47
CD9-209ENST00000540891 TULP4Q9NRJ4 1543 aa24.2■■□□□ 1.47
CD9-209ENST00000540891 GPRASP1Q5JY77 1395 aa24.2■■□□□ 1.46
CD9-209ENST00000540891 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.46
CD9-209ENST00000540891 PNPLA6Q8IY17 1366 aa24.19■■□□□ 1.46
CD9-209ENST00000540891 CENPJQ9HC77 1338 aaPredicted RBP24.18■■□□□ 1.46
CD9-209ENST00000540891 PHF8Q9UPP1 1060 aa24.18■■□□□ 1.46
CD9-209ENST00000540891 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
CD9-209ENST00000540891 XPCQ01831 940 aaPredicted RBP24.17■■□□□ 1.46
CD9-209ENST00000540891 RALGAPBQ86X10 1494 aa24.17■■□□□ 1.46
CD9-209ENST00000540891 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
CD9-209ENST00000540891 ILDR2Q71H61 639 aa24.16■■□□□ 1.46
CD9-209ENST00000540891 ATP7BP35670 1465 aa24.15■■□□□ 1.46
CD9-209ENST00000540891 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
CD9-209ENST00000540891 RGS17Q9UGC6 210 aaPredicted RBP24.15■■□□□ 1.46
CD9-209ENST00000540891 CDK19Q9BWU1 502 aa24.14■■□□□ 1.45
CD9-209ENST00000540891 QRICH2Q9H0J4 1663 aa24.14■■□□□ 1.45
CD9-209ENST00000540891 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
CD9-209ENST00000540891 KRT28Q7Z3Y7 464 aa24.11■■□□□ 1.45
CD9-209ENST00000540891 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
CD9-209ENST00000540891 NUTM2BA6NNL0 878 aaPredicted RBP24.1■■□□□ 1.45
CD9-209ENST00000540891 NUTM2EB1AL46 878 aaPredicted RBP24.1■■□□□ 1.45
CD9-209ENST00000540891 NUTM2AQ8IVF1 878 aaPredicted RBP24.1■■□□□ 1.45
CD9-209ENST00000540891 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
CD9-209ENST00000540891 CARD11Q9BXL7 1154 aa24.09■■□□□ 1.45
CD9-209ENST00000540891 SPATA31A3Q5VYP0 1347 aa24.08■■□□□ 1.44
CD9-209ENST00000540891 TOPAZ1Q8N9V7 1692 aa24.07■■□□□ 1.44
CD9-209ENST00000540891 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
CD9-209ENST00000540891 ITSN1Q15811 1721 aa24.06■■□□□ 1.44
CD9-209ENST00000540891 TIMELESSQ9UNS1 1208 aa24.05■■□□□ 1.44
CD9-209ENST00000540891 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
CD9-209ENST00000540891 TNS3Q68CZ2 1445 aa24.04■■□□□ 1.44
CD9-209ENST00000540891 PSME1Q06323 249 aa24.04■■□□□ 1.44
CD9-209ENST00000540891 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
CD9-209ENST00000540891 CABP2Q9NPB3 220 aa24.04■■□□□ 1.44
CD9-209ENST00000540891 CCDC61Q9Y6R9 512 aa24.03■■□□□ 1.44
CD9-209ENST00000540891 TRPM3Q9HCF6 1732 aaPredicted RBP24.03■■□□□ 1.44
CD9-209ENST00000540891 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
CD9-209ENST00000540891 POTEAQ6S8J7 498 aa24.01■■□□□ 1.43
CD9-209ENST00000540891 SBNO2Q9Y2G9 1366 aa24.01■■□□□ 1.43
CD9-209ENST00000540891 PLEKHG3A1L390 1219 aa24■■□□□ 1.43
CD9-209ENST00000540891 NGDNQ8NEJ9 315 aaKnown RBP24■■□□□ 1.43
CD9-209ENST00000540891 POLR3AO14802 1390 aaPredicted RBP24■■□□□ 1.43
CD9-209ENST00000540891 EVC2Q86UK5 1308 aa23.99■■□□□ 1.43
CD9-209ENST00000540891 ADAMTS2O95450 1211 aa23.98■■□□□ 1.43
CD9-209ENST00000540891 ACEP12821 1306 aa23.97■■□□□ 1.43
CD9-209ENST00000540891 PPIP5K1Q6PFW1 1433 aa23.97■■□□□ 1.43
CD9-209ENST00000540891 ALS2Q96Q42 1657 aa23.96■■□□□ 1.43
CD9-209ENST00000540891 ARHGEF10O15013 1369 aa23.95■■□□□ 1.42
CD9-209ENST00000540891 C8orf37Q96NL8 207 aa23.95■■□□□ 1.42
CD9-209ENST00000540891 AFF2P51816 1311 aa23.94■■□□□ 1.42
CD9-209ENST00000540891 CABP1Q9NZU7 370 aa23.93■■□□□ 1.42
CD9-209ENST00000540891 ZNF772Q68DY9 489 aaPredicted RBP23.92■■□□□ 1.42
CD9-209ENST00000540891 LMOD2Q6P5Q4 547 aa23.92■■□□□ 1.42
CD9-209ENST00000540891 CABLES1Q8TDN4 633 aa23.92■■□□□ 1.42
CD9-209ENST00000540891 ABCA3Q99758 1704 aa23.91■■□□□ 1.42
CD9-209ENST00000540891 ST20-MTHFSA0A0A6YYL1 179 aa23.91■■□□□ 1.42
CD9-209ENST00000540891 TESK2Q96S53 571 aa23.91■■□□□ 1.42
CD9-209ENST00000540891 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
CD9-209ENST00000540891 PAK3O75914 559 aaPredicted RBP23.89■■□□□ 1.41
CD9-209ENST00000540891 NGLY1Q96IV0 654 aa23.89■■□□□ 1.41
CD9-209ENST00000540891 USP47Q96K76 1375 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms