RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 TECPR2O15040 1411 aa28.64■■■□□ 2.18
SOD2-212ENST00000540491 RBM6P78332 1123 aaKnown RBP28.64■■■□□ 2.18
SOD2-212ENST00000540491 NPHP3Q7Z494 1330 aa28.64■■■□□ 2.17
SOD2-212ENST00000540491 ABCC11Q96J66 1382 aa28.63■■■□□ 2.17
SOD2-212ENST00000540491 NGLY1Q96IV0 654 aa28.63■■■□□ 2.17
SOD2-212ENST00000540491 QTRT2Q9H974 415 aaKnown RBP28.63■■■□□ 2.17
SOD2-212ENST00000540491 LRPPRCP42704 1394 aaKnown RBP28.62■■■□□ 2.17
SOD2-212ENST00000540491 CDC42BPGQ6DT37 1551 aa28.61■■■□□ 2.17
SOD2-212ENST00000540491 ESCO1Q5FWF5 840 aa28.6■■■□□ 2.17
SOD2-212ENST00000540491 SIRT1Q96EB6 747 aa28.59■■■□□ 2.17
SOD2-212ENST00000540491 ADAMTS2O95450 1211 aa28.57■■■□□ 2.16
SOD2-212ENST00000540491 PIK3C2GO75747 1445 aa28.56■■■□□ 2.16
SOD2-212ENST00000540491 STK26Q9P289 416 aa28.56■■■□□ 2.16
SOD2-212ENST00000540491 FNBP4Q8N3X1 1017 aaPredicted RBP28.55■■■□□ 2.16
SOD2-212ENST00000540491 WAPLQ7Z5K2 1190 aa28.53■■■□□ 2.16
SOD2-212ENST00000540491 TRPC5Q9UL62 973 aaPredicted RBP28.53■■■□□ 2.16
SOD2-212ENST00000540491 USP21Q9UK80 565 aa28.52■■■□□ 2.16
SOD2-212ENST00000540491 C14orf93Q9H972 538 aaKnown RBP28.51■■■□□ 2.15
SOD2-212ENST00000540491 FOXO3O43524 673 aa28.5■■■□□ 2.15
SOD2-212ENST00000540491 TMEM132EQ6IEE7 984 aa28.5■■■□□ 2.15
SOD2-212ENST00000540491 YTHDC2Q9H6S0 1430 aaKnown RBP28.5■■■□□ 2.15
SOD2-212ENST00000540491 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
SOD2-212ENST00000540491 COL22A1Q8NFW1 1626 aaPredicted RBP28.49■■■□□ 2.15
SOD2-212ENST00000540491 RGS12O14924 1447 aa28.48■■■□□ 2.15
SOD2-212ENST00000540491 DHX57Q6P158 1386 aaKnown RBP28.47■■■□□ 2.15
SOD2-212ENST00000540491 MYOM2P54296 1465 aa28.46■■■□□ 2.15
SOD2-212ENST00000540491 PXDNQ92626 1479 aa28.46■■■□□ 2.15
SOD2-212ENST00000540491 KNDC1Q76NI1 1749 aa28.46■■■□□ 2.15
SOD2-212ENST00000540491 NRXN1Q9ULB1 1477 aa28.44■■■□□ 2.14
SOD2-212ENST00000540491 PLEKHH1Q9ULM0 1364 aa28.42■■■□□ 2.14
SOD2-212ENST00000540491 NUTM2FA1L443 756 aa28.4■■■□□ 2.14
SOD2-212ENST00000540491 STAC3Q96MF2 364 aa28.4■■■□□ 2.14
SOD2-212ENST00000540491 ATRNO75882 1429 aa28.4■■■□□ 2.14
SOD2-212ENST00000540491 ATAD2Q6PL18 1390 aa28.39■■■□□ 2.14
SOD2-212ENST00000540491 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.13
SOD2-212ENST00000540491 XPCQ01831 940 aaPredicted RBP28.38■■■□□ 2.13
SOD2-212ENST00000540491 PSME1Q06323 249 aa28.38■■■□□ 2.13
SOD2-212ENST00000540491 CFAP70Q5T0N1 1121 aa28.38■■■□□ 2.13
SOD2-212ENST00000540491 KIF1AQ12756 1690 aa28.36■■■□□ 2.13
SOD2-212ENST00000540491 KRT28Q7Z3Y7 464 aa28.36■■■□□ 2.13
SOD2-212ENST00000540491 RAB3GAP2Q9H2M9 1393 aa28.36■■■□□ 2.13
SOD2-212ENST00000540491 PHF8Q9UPP1 1060 aa28.35■■■□□ 2.13
SOD2-212ENST00000540491 FMN2Q9NZ56 1722 aa28.35■■■□□ 2.13
SOD2-212ENST00000540491 BCL9LQ86UU0 1499 aa28.34■■■□□ 2.13
SOD2-212ENST00000540491 HRCP23327 699 aa28.33■■■□□ 2.13
SOD2-212ENST00000540491 GJD4Q96KN9 370 aaPredicted RBP28.32■■■□□ 2.12
SOD2-212ENST00000540491 PRAM1Q96QH2 718 aa28.32■■■□□ 2.12
SOD2-212ENST00000540491 CCDC125Q86Z20 511 aa28.31■■■□□ 2.12
SOD2-212ENST00000540491 POGKQ9P215 609 aa28.31■■■□□ 2.12
SOD2-212ENST00000540491 DLC1Q96QB1 1528 aa28.31■■■□□ 2.12
SOD2-212ENST00000540491 UNC5CLQ8IV45 518 aa28.3■■■□□ 2.12
SOD2-212ENST00000540491 SBNO1A3KN83 1393 aa28.29■■■□□ 2.12
SOD2-212ENST00000540491 ANKARQ7Z5J8 1434 aa28.28■■■□□ 2.12
SOD2-212ENST00000540491 TNS3Q68CZ2 1445 aa28.26■■■□□ 2.12
SOD2-212ENST00000540491 MARF1Q9Y4F3 1742 aaKnown RBP28.26■■■□□ 2.11
SOD2-212ENST00000540491 ARHGEF10O15013 1369 aa28.25■■■□□ 2.11
SOD2-212ENST00000540491 EIF3AQ14152 1382 aaKnown RBP28.25■■■□□ 2.11
SOD2-212ENST00000540491 SLIT2O94813 1529 aa28.25■■■□□ 2.11
SOD2-212ENST00000540491 HAP1P54257 671 aaPredicted RBP28.25■■■□□ 2.11
SOD2-212ENST00000540491 SAFB2Q14151 953 aaKnown RBP eCLIP28.23■■■□□ 2.11
SOD2-212ENST00000540491 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.21■■■□□ 2.11
SOD2-212ENST00000540491 DCAF11Q8TEB1 546 aa28.2■■■□□ 2.1
SOD2-212ENST00000540491 ADGRB1O14514 1584 aa28.2■■■□□ 2.1
SOD2-212ENST00000540491 TRAK1Q9UPV9 953 aa28.19■■■□□ 2.1
SOD2-212ENST00000540491 ADGRB2O60241 1585 aa28.19■■■□□ 2.1
SOD2-212ENST00000540491 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
SOD2-212ENST00000540491 VPS72Q15906 364 aa28.16■■■□□ 2.1
SOD2-212ENST00000540491 KDM2AQ9Y2K7 1162 aa28.16■■■□□ 2.1
SOD2-212ENST00000540491 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
SOD2-212ENST00000540491 GPRASP1Q5JY77 1395 aa28.15■■■□□ 2.1
SOD2-212ENST00000540491 LMOD2Q6P5Q4 547 aa28.15■■■□□ 2.1
SOD2-212ENST00000540491 PMFBP1Q8TBY8 1022 aa28.14■■■□□ 2.1
SOD2-212ENST00000540491 WASLO00401 505 aaPredicted RBP28.13■■■□□ 2.09
SOD2-212ENST00000540491 RGPD8O14715 1765 aaPredicted RBP28.12■■■□□ 2.09
SOD2-212ENST00000540491 ONECUT3O60422 494 aaPredicted RBP28.12■■■□□ 2.09
SOD2-212ENST00000540491 CABLES1Q8TDN4 633 aa28.12■■■□□ 2.09
SOD2-212ENST00000540491 ZRANB1Q9UGI0 708 aa28.12■■■□□ 2.09
SOD2-212ENST00000540491 MINK1Q8N4C8 1332 aaPredicted RBP28.1■■■□□ 2.09
SOD2-212ENST00000540491 EP400Q96L91 3159 aa28.09■■■□□ 2.09
SOD2-212ENST00000540491 HIRIP3Q9BW71 556 aaPredicted RBP28.09■■■□□ 2.09
SOD2-212ENST00000540491 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
SOD2-212ENST00000540491 GLI3P10071 1580 aa28.07■■■□□ 2.08
SOD2-212ENST00000540491 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
SOD2-212ENST00000540491 NWD2Q9ULI1 1742 aa28.06■■■□□ 2.08
SOD2-212ENST00000540491 FAM83GA6ND36 823 aa28.06■■■□□ 2.08
SOD2-212ENST00000540491 SEPT12Q8IYM1 358 aa28.06■■■□□ 2.08
SOD2-212ENST00000540491 NGDNQ8NEJ9 315 aaKnown RBP28.06■■■□□ 2.08
SOD2-212ENST00000540491 PRR36Q9H6K5 1346 aa28.05■■■□□ 2.08
SOD2-212ENST00000540491 CCDC9Q9Y3X0 531 aaKnown RBP28.05■■■□□ 2.08
SOD2-212ENST00000540491 SF3B2Q13435 895 aaKnown RBP28.02■■■□□ 2.08
SOD2-212ENST00000540491 PLEKHG5O94827 1062 aa27.99■■■□□ 2.07
SOD2-212ENST00000540491 KRT27Q7Z3Y8 459 aa27.99■■■□□ 2.07
SOD2-212ENST00000540491 TRPM3Q9HCF6 1732 aaPredicted RBP27.98■■■□□ 2.07
SOD2-212ENST00000540491 NUDT16Q96DE0 195 aaKnown RBP27.98■■■□□ 2.07
SOD2-212ENST00000540491 BTG4Q9NY30 223 aa27.98■■■□□ 2.07
SOD2-212ENST00000540491 ABCA3Q99758 1704 aa27.98■■■□□ 2.07
SOD2-212ENST00000540491 SRCAPQ6ZRS2 3230 aa27.97■■■□□ 2.07
SOD2-212ENST00000540491 PLCH1Q4KWH8 1693 aa27.97■■■□□ 2.07
SOD2-212ENST00000540491 PAK3O75914 559 aaPredicted RBP27.96■■■□□ 2.07
SOD2-212ENST00000540491 ALS2Q96Q42 1657 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms