RNA–Protein interactions for RNA: ENST00000540009.1

ZNF664-208, Transcript of zinc finger protein 664, human

TSL 3

Gene ZNF664, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF664-208	ENST00000540009	PRAM1	Q96QH2	718 aa		32.8	■■■□□ 2.84
ZNF664-208	ENST00000540009	DLC1	Q96QB1	1528 aa		32.8	■■■□□ 2.84
ZNF664-208	ENST00000540009	DISP3	Q9P2K9	1392 aa		32.8	■■■□□ 2.84
ZNF664-208	ENST00000540009	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.78	■■■□□ 2.84
ZNF664-208	ENST00000540009	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.77	■■■□□ 2.84
ZNF664-208	ENST00000540009	COL16A1	Q07092	1604 aa	Predicted RBP	32.77	■■■□□ 2.84
ZNF664-208	ENST00000540009	PCGF6	Q9BYE7	350 aa		32.76	■■■□□ 2.83
ZNF664-208	ENST00000540009	POGK	Q9P215	609 aa		32.76	■■■□□ 2.83
ZNF664-208	ENST00000540009	MED1	Q15648	1581 aa	Predicted RBP	32.75	■■■□□ 2.83
ZNF664-208	ENST00000540009	ORAI2	Q96SN7	254 aa		32.74	■■■□□ 2.83
ZNF664-208	ENST00000540009	KIAA1210	Q9ULL0	1709 aa		32.74	■■■□□ 2.83
ZNF664-208	ENST00000540009	NHSL1	Q5SYE7	1610 aa		32.71	■■■□□ 2.83
ZNF664-208	ENST00000540009	NUTM2F	A1L443	756 aa		32.71	■■■□□ 2.83
ZNF664-208	ENST00000540009	NBPF1	Q3BBV0	1214 aa		32.71	■■■□□ 2.83
ZNF664-208	ENST00000540009	DDX17	Q92841	729 aa	Known RBP	32.71	■■■□□ 2.83
ZNF664-208	ENST00000540009	JCAD	Q9P266	1359 aa		32.68	■■■□□ 2.82
ZNF664-208	ENST00000540009	FMN2	Q9NZ56	1722 aa		32.67	■■■□□ 2.82
ZNF664-208	ENST00000540009	ESCO1	Q5FWF5	840 aa		32.66	■■■□□ 2.82
ZNF664-208	ENST00000540009	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.65	■■■□□ 2.82
ZNF664-208	ENST00000540009	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.62	■■■□□ 2.81
ZNF664-208	ENST00000540009	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.62	■■■□□ 2.81
ZNF664-208	ENST00000540009	TONSL	Q96HA7	1378 aa		32.61	■■■□□ 2.81
ZNF664-208	ENST00000540009	ADGRB2	O60241	1585 aa		32.6	■■■□□ 2.81
ZNF664-208	ENST00000540009	TRPM1	Q7Z4N2	1603 aa		32.58	■■■□□ 2.81
ZNF664-208	ENST00000540009	LRRC59	Q96AG4	307 aa	Known RBP	32.57	■■■□□ 2.8
ZNF664-208	ENST00000540009	PHF23	Q9BUL5	403 aa	Predicted RBP	32.56	■■■□□ 2.8
ZNF664-208	ENST00000540009	SHPRH	Q149N8	1683 aa		32.56	■■■□□ 2.8
ZNF664-208	ENST00000540009	SOS2	Q07890	1332 aa	Predicted RBP	32.55	■■■□□ 2.8
ZNF664-208	ENST00000540009	NBPF8	Q3BBV2	869 aa		32.55	■■■□□ 2.8
ZNF664-208	ENST00000540009	FOXO3	O43524	673 aa		32.54	■■■□□ 2.8
ZNF664-208	ENST00000540009	RGPD8	O14715	1765 aa	Predicted RBP	32.54	■■■□□ 2.8
ZNF664-208	ENST00000540009	NPHP3	Q7Z494	1330 aa		32.53	■■■□□ 2.8
ZNF664-208	ENST00000540009	SPATA31A6	Q5VVP1	1343 aa		32.52	■■■□□ 2.8
ZNF664-208	ENST00000540009	WASL	O00401	505 aa	Predicted RBP	32.52	■■■□□ 2.8
ZNF664-208	ENST00000540009	ROCK2	O75116	1388 aa	Known RBP	32.51	■■■□□ 2.79
ZNF664-208	ENST00000540009	USP32	Q8NFA0	1604 aa		32.5	■■■□□ 2.79
ZNF664-208	ENST00000540009	XPC	Q01831	940 aa	Predicted RBP	32.49	■■■□□ 2.79
ZNF664-208	ENST00000540009	PHF8	Q9UPP1	1060 aa		32.49	■■■□□ 2.79
ZNF664-208	ENST00000540009	ANKAR	Q7Z5J8	1434 aa		32.49	■■■□□ 2.79
ZNF664-208	ENST00000540009	KIF1A	Q12756	1690 aa		32.49	■■■□□ 2.79
ZNF664-208	ENST00000540009	ILDR2	Q71H61	639 aa		32.48	■■■□□ 2.79
ZNF664-208	ENST00000540009	PNPLA6	Q8IY17	1366 aa		32.47	■■■□□ 2.79
ZNF664-208	ENST00000540009	LRP6	O75581	1613 aa		32.47	■■■□□ 2.79
ZNF664-208	ENST00000540009	PXDN	Q92626	1479 aa		32.47	■■■□□ 2.79
ZNF664-208	ENST00000540009	EIF3A	Q14152	1382 aa	Known RBP	32.46	■■■□□ 2.79
ZNF664-208	ENST00000540009	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.46	■■■□□ 2.79
ZNF664-208	ENST00000540009	TULP4	Q9NRJ4	1543 aa		32.46	■■■□□ 2.79
ZNF664-208	ENST00000540009	PRR36	Q9H6K5	1346 aa		32.45	■■■□□ 2.78
ZNF664-208	ENST00000540009	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.44	■■■□□ 2.78
ZNF664-208	ENST00000540009	NUTM2E	B1AL46	878 aa	Predicted RBP	32.44	■■■□□ 2.78
ZNF664-208	ENST00000540009	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.44	■■■□□ 2.78
ZNF664-208	ENST00000540009	PMFBP1	Q8TBY8	1022 aa		32.42	■■■□□ 2.78
ZNF664-208	ENST00000540009	CDK19	Q9BWU1	502 aa		32.42	■■■□□ 2.78
ZNF664-208	ENST00000540009	RGS17	Q9UGC6	210 aa	Predicted RBP	32.41	■■■□□ 2.78
ZNF664-208	ENST00000540009	KRT28	Q7Z3Y7	464 aa		32.4	■■■□□ 2.78
ZNF664-208	ENST00000540009	MEX3C	Q5U5Q3	659 aa	Known RBP	32.39	■■■□□ 2.78
ZNF664-208	ENST00000540009	GPRASP1	Q5JY77	1395 aa		32.39	■■■□□ 2.78
ZNF664-208	ENST00000540009	QRICH2	Q9H0J4	1663 aa		32.38	■■■□□ 2.77
ZNF664-208	ENST00000540009	CLSPN	Q9HAW4	1339 aa		32.38	■■■□□ 2.77
ZNF664-208	ENST00000540009	RALGAPB	Q86X10	1494 aa		32.36	■■■□□ 2.77
ZNF664-208	ENST00000540009	NUDT16	Q96DE0	195 aa	Known RBP	32.36	■■■□□ 2.77
ZNF664-208	ENST00000540009	ATP7B	P35670	1465 aa		32.35	■■■□□ 2.77
ZNF664-208	ENST00000540009	CARD11	Q9BXL7	1154 aa		32.35	■■■□□ 2.77
ZNF664-208	ENST00000540009	PSME1	Q06323	249 aa		32.34	■■■□□ 2.77
ZNF664-208	ENST00000540009	SPATA31A3	Q5VYP0	1347 aa		32.32	■■■□□ 2.76
ZNF664-208	ENST00000540009	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.32	■■■□□ 2.76
ZNF664-208	ENST00000540009	CCER1	Q8TC90	406 aa	Predicted RBP	32.31	■■■□□ 2.76
ZNF664-208	ENST00000540009	SRPK2	P78362	688 aa	Known RBP	32.3	■■■□□ 2.76
ZNF664-208	ENST00000540009	ITSN1	Q15811	1721 aa		32.3	■■■□□ 2.76
ZNF664-208	ENST00000540009	NGDN	Q8NEJ9	315 aa	Known RBP	32.28	■■■□□ 2.76
ZNF664-208	ENST00000540009	CABP2	Q9NPB3	220 aa		32.28	■■■□□ 2.76
ZNF664-208	ENST00000540009	ADAMTS2	O95450	1211 aa		32.27	■■■□□ 2.76
ZNF664-208	ENST00000540009	CCDC61	Q9Y6R9	512 aa		32.27	■■■□□ 2.76
ZNF664-208	ENST00000540009	TNS3	Q68CZ2	1445 aa		32.26	■■■□□ 2.76
ZNF664-208	ENST00000540009	SBNO1	A3KN83	1393 aa		32.26	■■■□□ 2.75
ZNF664-208	ENST00000540009	POTEA	Q6S8J7	498 aa		32.25	■■■□□ 2.75
ZNF664-208	ENST00000540009	TOPAZ1	Q8N9V7	1692 aa		32.24	■■■□□ 2.75
ZNF664-208	ENST00000540009	TIMELESS	Q9UNS1	1208 aa		32.24	■■■□□ 2.75
ZNF664-208	ENST00000540009	C8orf37	Q96NL8	207 aa		32.23	■■■□□ 2.75
ZNF664-208	ENST00000540009	EVC2	Q86UK5	1308 aa		32.23	■■■□□ 2.75
ZNF664-208	ENST00000540009	LMOD2	Q6P5Q4	547 aa		32.22	■■■□□ 2.75
ZNF664-208	ENST00000540009	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.2	■■■□□ 2.75
ZNF664-208	ENST00000540009	PLEKHG3	A1L390	1219 aa		32.19	■■■□□ 2.74
ZNF664-208	ENST00000540009	ZNF772	Q68DY9	489 aa	Predicted RBP	32.19	■■■□□ 2.74
ZNF664-208	ENST00000540009	AFF2	P51816	1311 aa		32.19	■■■□□ 2.74
ZNF664-208	ENST00000540009	PPIP5K1	Q6PFW1	1433 aa		32.18	■■■□□ 2.74
ZNF664-208	ENST00000540009	ACE	P12821	1306 aa		32.18	■■■□□ 2.74
ZNF664-208	ENST00000540009	POLR3A	O14802	1390 aa	Predicted RBP	32.17	■■■□□ 2.74
ZNF664-208	ENST00000540009	ARHGEF10	O15013	1369 aa		32.17	■■■□□ 2.74
ZNF664-208	ENST00000540009	PLEKHG5	O94827	1062 aa		32.16	■■■□□ 2.74
ZNF664-208	ENST00000540009	NGLY1	Q96IV0	654 aa		32.16	■■■□□ 2.74
ZNF664-208	ENST00000540009	PAK3	O75914	559 aa	Predicted RBP	32.15	■■■□□ 2.74
ZNF664-208	ENST00000540009	SBNO2	Q9Y2G9	1366 aa		32.15	■■■□□ 2.74
ZNF664-208	ENST00000540009	CABLES1	Q8TDN4	633 aa		32.14	■■■□□ 2.74
ZNF664-208	ENST00000540009	ALS2	Q96Q42	1657 aa		32.12	■■■□□ 2.73
ZNF664-208	ENST00000540009	CABP1	Q9NZU7	370 aa		32.12	■■■□□ 2.73
ZNF664-208	ENST00000540009	HAP1	P54257	671 aa	Predicted RBP	32.1	■■■□□ 2.73
ZNF664-208	ENST00000540009	MARF1	Q9Y4F3	1742 aa	Known RBP	32.09	■■■□□ 2.73
ZNF664-208	ENST00000540009	SOCS7	O14512	581 aa		32.08	■■■□□ 2.73
ZNF664-208	ENST00000540009	ST20-MTHFS	A0A0A6YYL1	179 aa		32.07	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms