RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SHPRHQ149N8 1683 aa24.69■■□□□ 1.54
DDB1-215ENST00000539712 POTEAQ6S8J7 498 aa24.69■■□□□ 1.54
DDB1-215ENST00000539712 KNDC1Q76NI1 1749 aa24.66■■□□□ 1.54
DDB1-215ENST00000539712 LAMC1P11047 1609 aa24.66■■□□□ 1.54
DDB1-215ENST00000539712 SIRT1Q96EB6 747 aa24.66■■□□□ 1.54
DDB1-215ENST00000539712 CDC42BPGQ6DT37 1551 aa24.66■■□□□ 1.54
DDB1-215ENST00000539712 LRRC59Q96AG4 307 aaKnown RBP24.64■■□□□ 1.54
DDB1-215ENST00000539712 DHX57Q6P158 1386 aaKnown RBP24.63■■□□□ 1.53
DDB1-215ENST00000539712 SOS2Q07890 1332 aaPredicted RBP24.61■■□□□ 1.53
DDB1-215ENST00000539712 PNPLA6Q8IY17 1366 aa24.6■■□□□ 1.53
DDB1-215ENST00000539712 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
DDB1-215ENST00000539712 ADGRB1O14514 1584 aa24.59■■□□□ 1.53
DDB1-215ENST00000539712 KDM2AQ9Y2K7 1162 aa24.59■■□□□ 1.53
DDB1-215ENST00000539712 NUTM2BA6NNL0 878 aaPredicted RBP24.57■■□□□ 1.52
DDB1-215ENST00000539712 NUTM2EB1AL46 878 aaPredicted RBP24.57■■□□□ 1.52
DDB1-215ENST00000539712 ESCO1Q5FWF5 840 aa24.57■■□□□ 1.52
DDB1-215ENST00000539712 NUTM2AQ8IVF1 878 aaPredicted RBP24.57■■□□□ 1.52
DDB1-215ENST00000539712 NUTM2FA1L443 756 aa24.55■■□□□ 1.52
DDB1-215ENST00000539712 STAC3Q96MF2 364 aa24.55■■□□□ 1.52
DDB1-215ENST00000539712 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
DDB1-215ENST00000539712 MEX3CQ5U5Q3 659 aaKnown RBP24.54■■□□□ 1.52
DDB1-215ENST00000539712 DLC1Q96QB1 1528 aa24.53■■□□□ 1.52
DDB1-215ENST00000539712 FMN2Q9NZ56 1722 aa24.52■■□□□ 1.52
DDB1-215ENST00000539712 FOXO3O43524 673 aa24.52■■□□□ 1.52
DDB1-215ENST00000539712 PXDNQ92626 1479 aa24.51■■□□□ 1.51
DDB1-215ENST00000539712 SAFB2Q14151 953 aaKnown RBP eCLIP24.5■■□□□ 1.51
DDB1-215ENST00000539712 NPHP3Q7Z494 1330 aa24.5■■□□□ 1.51
DDB1-215ENST00000539712 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
DDB1-215ENST00000539712 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
DDB1-215ENST00000539712 ZNF772Q68DY9 489 aaPredicted RBP24.48■■□□□ 1.51
DDB1-215ENST00000539712 POGKQ9P215 609 aa24.46■■□□□ 1.51
DDB1-215ENST00000539712 AFF2P51816 1311 aa24.45■■□□□ 1.5
DDB1-215ENST00000539712 COL22A1Q8NFW1 1626 aaPredicted RBP24.43■■□□□ 1.5
DDB1-215ENST00000539712 RGPD8O14715 1765 aaPredicted RBP24.43■■□□□ 1.5
DDB1-215ENST00000539712 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
DDB1-215ENST00000539712 C8orf37Q96NL8 207 aa24.42■■□□□ 1.5
DDB1-215ENST00000539712 ADGRB2O60241 1585 aa24.42■■□□□ 1.5
DDB1-215ENST00000539712 USP32Q8NFA0 1604 aa24.4■■□□□ 1.5
DDB1-215ENST00000539712 HIRIP3Q9BW71 556 aaPredicted RBP24.4■■□□□ 1.5
DDB1-215ENST00000539712 PHF8Q9UPP1 1060 aa24.4■■□□□ 1.5
DDB1-215ENST00000539712 KIF1AQ12756 1690 aa24.4■■□□□ 1.5
DDB1-215ENST00000539712 SPATA31A3Q5VYP0 1347 aa24.38■■□□□ 1.49
DDB1-215ENST00000539712 MINK1Q8N4C8 1332 aaPredicted RBP24.38■■□□□ 1.49
DDB1-215ENST00000539712 KRT28Q7Z3Y7 464 aa24.38■■□□□ 1.49
DDB1-215ENST00000539712 ANKARQ7Z5J8 1434 aa24.37■■□□□ 1.49
DDB1-215ENST00000539712 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
DDB1-215ENST00000539712 NBPF1Q3BBV0 1214 aa24.36■■□□□ 1.49
DDB1-215ENST00000539712 NGLY1Q96IV0 654 aa24.36■■□□□ 1.49
DDB1-215ENST00000539712 RXRBP28702 533 aa24.35■■□□□ 1.49
DDB1-215ENST00000539712 SIN3AQ96ST3 1273 aa24.35■■□□□ 1.49
DDB1-215ENST00000539712 ARHGEF28Q8N1W1 1705 aaKnown RBP24.35■■□□□ 1.49
DDB1-215ENST00000539712 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
DDB1-215ENST00000539712 FNBP4Q8N3X1 1017 aaPredicted RBP24.34■■□□□ 1.49
DDB1-215ENST00000539712 KIAA1210Q9ULL0 1709 aa24.34■■□□□ 1.49
DDB1-215ENST00000539712 L3MBTL2Q969R5 705 aa24.33■■□□□ 1.49
DDB1-215ENST00000539712 QTRT2Q9H974 415 aaKnown RBP24.33■■□□□ 1.49
DDB1-215ENST00000539712 PMFBP1Q8TBY8 1022 aa24.32■■□□□ 1.48
DDB1-215ENST00000539712 CDK12Q9NYV4 1490 aaPredicted RBP24.3■■□□□ 1.48
DDB1-215ENST00000539712 TULP4Q9NRJ4 1543 aa24.3■■□□□ 1.48
DDB1-215ENST00000539712 SBNO1A3KN83 1393 aa24.29■■□□□ 1.48
DDB1-215ENST00000539712 TNS3Q68CZ2 1445 aa24.28■■□□□ 1.48
DDB1-215ENST00000539712 PSME1Q06323 249 aa24.28■■□□□ 1.48
DDB1-215ENST00000539712 USP21Q9UK80 565 aa24.28■■□□□ 1.48
DDB1-215ENST00000539712 RBM6P78332 1123 aaKnown RBP24.27■■□□□ 1.48
DDB1-215ENST00000539712 EIF3AQ14152 1382 aaKnown RBP24.27■■□□□ 1.48
DDB1-215ENST00000539712 BCL9LQ86UU0 1499 aa24.26■■□□□ 1.47
DDB1-215ENST00000539712 MARF1Q9Y4F3 1742 aaKnown RBP24.25■■□□□ 1.47
DDB1-215ENST00000539712 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
DDB1-215ENST00000539712 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
DDB1-215ENST00000539712 ATP7BP35670 1465 aa24.24■■□□□ 1.47
DDB1-215ENST00000539712 NUDT16Q96DE0 195 aaKnown RBP24.23■■□□□ 1.47
DDB1-215ENST00000539712 CDK19Q9BWU1 502 aa24.23■■□□□ 1.47
DDB1-215ENST00000539712 RGS12O14924 1447 aa24.23■■□□□ 1.47
DDB1-215ENST00000539712 ATRNO75882 1429 aa24.23■■□□□ 1.47
DDB1-215ENST00000539712 TRPM3Q9HCF6 1732 aaPredicted RBP24.23■■□□□ 1.47
DDB1-215ENST00000539712 TRPC5Q9UL62 973 aaPredicted RBP24.22■■□□□ 1.47
DDB1-215ENST00000539712 ARHGEF10O15013 1369 aa24.2■■□□□ 1.46
DDB1-215ENST00000539712 UPF1Q92900 1129 aaKnown RBP eCLIP24.19■■□□□ 1.46
DDB1-215ENST00000539712 SLIT2O94813 1529 aa24.19■■□□□ 1.46
DDB1-215ENST00000539712 LMOD2Q6P5Q4 547 aa24.18■■□□□ 1.46
DDB1-215ENST00000539712 GPRASP1Q5JY77 1395 aa24.17■■□□□ 1.46
DDB1-215ENST00000539712 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
DDB1-215ENST00000539712 ALS2Q96Q42 1657 aa24.17■■□□□ 1.46
DDB1-215ENST00000539712 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
DDB1-215ENST00000539712 ABCA3Q99758 1704 aa24.15■■□□□ 1.46
DDB1-215ENST00000539712 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
DDB1-215ENST00000539712 TRPM1Q7Z4N2 1603 aa24.15■■□□□ 1.46
DDB1-215ENST00000539712 PLEKHG5O94827 1062 aa24.15■■□□□ 1.46
DDB1-215ENST00000539712 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
DDB1-215ENST00000539712 NBPF8Q3BBV2 869 aa24.14■■□□□ 1.45
DDB1-215ENST00000539712 UNC5CLQ8IV45 518 aa24.14■■□□□ 1.45
DDB1-215ENST00000539712 EP400Q96L91 3159 aa24.13■■□□□ 1.45
DDB1-215ENST00000539712 PLEKHG3A1L390 1219 aa24.13■■□□□ 1.45
DDB1-215ENST00000539712 TOPAZ1Q8N9V7 1692 aa24.13■■□□□ 1.45
DDB1-215ENST00000539712 POLR3AO14802 1390 aaPredicted RBP24.13■■□□□ 1.45
DDB1-215ENST00000539712 ITSN1Q15811 1721 aa24.13■■□□□ 1.45
DDB1-215ENST00000539712 FAM83GA6ND36 823 aa24.12■■□□□ 1.45
DDB1-215ENST00000539712 GJD4Q96KN9 370 aaPredicted RBP24.12■■□□□ 1.45
DDB1-215ENST00000539712 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.12■■□□□ 1.45
DDB1-215ENST00000539712 ACEP12821 1306 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms