RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 SRCAPQ6ZRS2 3230 aa21.47■■□□□ 1.03
PBX3-212ENST00000538998 NPHP3Q7Z494 1330 aa21.47■■□□□ 1.03
PBX3-212ENST00000538998 CCDC125Q86Z20 511 aa21.46■■□□□ 1.03
PBX3-212ENST00000538998 RPGRIP1LQ68CZ1 1315 aa21.46■■□□□ 1.03
PBX3-212ENST00000538998 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
PBX3-212ENST00000538998 CDC42BPGQ6DT37 1551 aa21.44■■□□□ 1.02
PBX3-212ENST00000538998 ESCO1Q5FWF5 840 aa21.42■■□□□ 1.02
PBX3-212ENST00000538998 PXDNQ92626 1479 aa21.42■■□□□ 1.02
PBX3-212ENST00000538998 LRPPRCP42704 1394 aaKnown RBP21.39■■□□□ 1.02
PBX3-212ENST00000538998 GJD4Q96KN9 370 aaPredicted RBP21.39■■□□□ 1.01
PBX3-212ENST00000538998 NAIPQ13075 1403 aa21.38■■□□□ 1.01
PBX3-212ENST00000538998 FOXO3O43524 673 aa21.37■■□□□ 1.01
PBX3-212ENST00000538998 MARF1Q9Y4F3 1742 aaKnown RBP21.37■■□□□ 1.01
PBX3-212ENST00000538998 EP400Q96L91 3159 aa21.36■■□□□ 1.01
PBX3-212ENST00000538998 PPLO60437 1756 aa21.36■■□□□ 1.01
PBX3-212ENST00000538998 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
PBX3-212ENST00000538998 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.35■■□□□ 1.01
PBX3-212ENST00000538998 BLMP54132 1417 aaPredicted RBP21.33■■□□□ 1.01
PBX3-212ENST00000538998 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
PBX3-212ENST00000538998 TECPR2O15040 1411 aa21.32■■□□□ 1
PBX3-212ENST00000538998 UNC5CLQ8IV45 518 aa21.32■■□□□ 1
PBX3-212ENST00000538998 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
PBX3-212ENST00000538998 SLIT2O94813 1529 aa21.31■■□□□ 1
PBX3-212ENST00000538998 SLC4A1APQ9BWU0 796 aaKnown RBP21.31■■□□□ 1
PBX3-212ENST00000538998 RRBP1Q9P2E9 1410 aaKnown RBP21.3■■□□□ 1
PBX3-212ENST00000538998 GLI3P10071 1580 aa21.29■■□□□ 1
PBX3-212ENST00000538998 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
PBX3-212ENST00000538998 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
PBX3-212ENST00000538998 NUTM2FA1L443 756 aa21.28■■□□□ 1
PBX3-212ENST00000538998 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
PBX3-212ENST00000538998 STK26Q9P289 416 aa21.27■■□□□ 1
PBX3-212ENST00000538998 ADGRF5Q8IZF2 1346 aa21.27■□□□□ 0.99
PBX3-212ENST00000538998 USP32Q8NFA0 1604 aa21.26■□□□□ 0.99
PBX3-212ENST00000538998 ABCC11Q96J66 1382 aa21.26■□□□□ 0.99
PBX3-212ENST00000538998 KIF1AQ12756 1690 aa21.26■□□□□ 0.99
PBX3-212ENST00000538998 SF3B2Q13435 895 aaKnown RBP21.25■□□□□ 0.99
PBX3-212ENST00000538998 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
PBX3-212ENST00000538998 KNDC1Q76NI1 1749 aa21.23■□□□□ 0.99
PBX3-212ENST00000538998 FMN2Q9NZ56 1722 aa21.23■□□□□ 0.99
PBX3-212ENST00000538998 PLEKHH1Q9ULM0 1364 aa21.23■□□□□ 0.99
PBX3-212ENST00000538998 HAP1P54257 671 aaPredicted RBP21.22■□□□□ 0.99
PBX3-212ENST00000538998 KRT28Q7Z3Y7 464 aa21.22■□□□□ 0.99
PBX3-212ENST00000538998 SEPT12Q8IYM1 358 aa21.22■□□□□ 0.99
PBX3-212ENST00000538998 TNS3Q68CZ2 1445 aa21.21■□□□□ 0.99
PBX3-212ENST00000538998 VPS72Q15906 364 aa21.21■□□□□ 0.99
PBX3-212ENST00000538998 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
PBX3-212ENST00000538998 PIK3C2GO75747 1445 aa21.2■□□□□ 0.98
PBX3-212ENST00000538998 SPATA31E1Q6ZUB1 1445 aa21.2■□□□□ 0.98
PBX3-212ENST00000538998 PSME1Q06323 249 aa21.19■□□□□ 0.98
PBX3-212ENST00000538998 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
PBX3-212ENST00000538998 TMEM132EQ6IEE7 984 aa21.19■□□□□ 0.98
PBX3-212ENST00000538998 YTHDC2Q9H6S0 1430 aaKnown RBP21.19■□□□□ 0.98
PBX3-212ENST00000538998 LRP5O75197 1615 aa21.18■□□□□ 0.98
PBX3-212ENST00000538998 BRWD3Q6RI45 1802 aa21.18■□□□□ 0.98
PBX3-212ENST00000538998 ONECUT3O60422 494 aaPredicted RBP21.17■□□□□ 0.98
PBX3-212ENST00000538998 PHF8Q9UPP1 1060 aa21.17■□□□□ 0.98
PBX3-212ENST00000538998 IFT172Q9UG01 1749 aa21.17■□□□□ 0.98
PBX3-212ENST00000538998 NWD2Q9ULI1 1742 aa21.16■□□□□ 0.98
PBX3-212ENST00000538998 SBNO1A3KN83 1393 aa21.16■□□□□ 0.98
PBX3-212ENST00000538998 KRT27Q7Z3Y8 459 aa21.16■□□□□ 0.98
PBX3-212ENST00000538998 SIRT1Q96EB6 747 aa21.16■□□□□ 0.98
PBX3-212ENST00000538998 CCDC9Q9Y3X0 531 aaKnown RBP21.16■□□□□ 0.98
PBX3-212ENST00000538998 PLCH1Q4KWH8 1693 aa21.15■□□□□ 0.98
PBX3-212ENST00000538998 ARHGEF10O15013 1369 aa21.15■□□□□ 0.98
PBX3-212ENST00000538998 CABLES1Q8TDN4 633 aa21.14■□□□□ 0.97
PBX3-212ENST00000538998 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
PBX3-212ENST00000538998 BAG6P46379 1132 aa21.11■□□□□ 0.97
PBX3-212ENST00000538998 LMOD2Q6P5Q4 547 aa21.11■□□□□ 0.97
PBX3-212ENST00000538998 ABCA3Q99758 1704 aa21.1■□□□□ 0.97
PBX3-212ENST00000538998 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
PBX3-212ENST00000538998 A0A0G2JS52 829 aa21.09■□□□□ 0.97
PBX3-212ENST00000538998 MYT1Q01538 1121 aa21.09■□□□□ 0.97
PBX3-212ENST00000538998 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
PBX3-212ENST00000538998 FAM83GA6ND36 823 aa21.08■□□□□ 0.97
PBX3-212ENST00000538998 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
PBX3-212ENST00000538998 ANKARQ7Z5J8 1434 aa21.06■□□□□ 0.96
PBX3-212ENST00000538998 RGPD8O14715 1765 aaPredicted RBP21.06■□□□□ 0.96
PBX3-212ENST00000538998 HRCP23327 699 aa21.06■□□□□ 0.96
PBX3-212ENST00000538998 MPHOSPH9Q99550 1183 aa21.06■□□□□ 0.96
PBX3-212ENST00000538998 PSDA5PKW4 1024 aaPredicted RBP21.05■□□□□ 0.96
PBX3-212ENST00000538998 FAM98CQ17RN3 349 aaKnown RBP21.05■□□□□ 0.96
PBX3-212ENST00000538998 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
PBX3-212ENST00000538998 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
PBX3-212ENST00000538998 SAFB2Q14151 953 aaKnown RBP eCLIP21.03■□□□□ 0.96
PBX3-212ENST00000538998 BTG4Q9NY30 223 aa21.03■□□□□ 0.96
PBX3-212ENST00000538998 CFAP70Q5T0N1 1121 aa21.02■□□□□ 0.96
PBX3-212ENST00000538998 PMFBP1Q8TBY8 1022 aa21.02■□□□□ 0.96
PBX3-212ENST00000538998 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
PBX3-212ENST00000538998 ADGRB2O60241 1585 aa21.01■□□□□ 0.95
PBX3-212ENST00000538998 COL14A1Q05707 1796 aaKnown RBP21■□□□□ 0.95
PBX3-212ENST00000538998 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
PBX3-212ENST00000538998 POGKQ9P215 609 aa21■□□□□ 0.95
PBX3-212ENST00000538998 RGPD1P0DJD0 1748 aa21■□□□□ 0.95
PBX3-212ENST00000538998 DISP2A7MBM2 1401 aa20.99■□□□□ 0.95
PBX3-212ENST00000538998 TRPM3Q9HCF6 1732 aaPredicted RBP20.98■□□□□ 0.95
PBX3-212ENST00000538998 EN1Q05925 392 aaPredicted RBP20.98■□□□□ 0.95
PBX3-212ENST00000538998 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
PBX3-212ENST00000538998 SPATA31A5Q5VU36 1347 aa20.97■□□□□ 0.95
PBX3-212ENST00000538998 SPATA31A7Q8IWB4 1347 aa20.97■□□□□ 0.95
PBX3-212ENST00000538998 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms