RNA–Protein interactions for RNA: ENST00000538994.1

CPT1A-204, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5 BASIC

Gene CPT1A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-204ENST00000538994 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
CPT1A-204ENST00000538994 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
CPT1A-204ENST00000538994 CDC42BPGQ6DT37 1551 aa16.15■□□□□ 0.18
CPT1A-204ENST00000538994 LAMC1P11047 1609 aa16.14■□□□□ 0.17
CPT1A-204ENST00000538994 SHPRHQ149N8 1683 aa16.13■□□□□ 0.17
CPT1A-204ENST00000538994 SOCS7O14512 581 aa16.12■□□□□ 0.17
CPT1A-204ENST00000538994 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
CPT1A-204ENST00000538994 POTEAQ6S8J7 498 aa16.11■□□□□ 0.17
CPT1A-204ENST00000538994 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
CPT1A-204ENST00000538994 NUTM2FA1L443 756 aa16.1■□□□□ 0.17
CPT1A-204ENST00000538994 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
CPT1A-204ENST00000538994 FMN2Q9NZ56 1722 aa16.09■□□□□ 0.17
CPT1A-204ENST00000538994 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
CPT1A-204ENST00000538994 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
CPT1A-204ENST00000538994 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
CPT1A-204ENST00000538994 SAFB2Q14151 953 aaKnown RBP eCLIP16.08■□□□□ 0.16
CPT1A-204ENST00000538994 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
CPT1A-204ENST00000538994 PNPLA6Q8IY17 1366 aa16.08■□□□□ 0.16
CPT1A-204ENST00000538994 ESCO1Q5FWF5 840 aa16.07■□□□□ 0.16
CPT1A-204ENST00000538994 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
CPT1A-204ENST00000538994 PXDNQ92626 1479 aa16.06■□□□□ 0.16
CPT1A-204ENST00000538994 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
CPT1A-204ENST00000538994 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
CPT1A-204ENST00000538994 NUTM2BA6NNL0 878 aaPredicted RBP16.04■□□□□ 0.16
CPT1A-204ENST00000538994 NUTM2EB1AL46 878 aaPredicted RBP16.04■□□□□ 0.16
CPT1A-204ENST00000538994 FOXO3O43524 673 aa16.04■□□□□ 0.16
CPT1A-204ENST00000538994 XPCQ01831 940 aaPredicted RBP16.04■□□□□ 0.16
CPT1A-204ENST00000538994 NBPF1Q3BBV0 1214 aa16.04■□□□□ 0.16
CPT1A-204ENST00000538994 NUTM2AQ8IVF1 878 aaPredicted RBP16.04■□□□□ 0.16
CPT1A-204ENST00000538994 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
CPT1A-204ENST00000538994 RGPD8O14715 1765 aaPredicted RBP16.04■□□□□ 0.16
CPT1A-204ENST00000538994 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
CPT1A-204ENST00000538994 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
CPT1A-204ENST00000538994 ADGRB2O60241 1585 aa16.02■□□□□ 0.16
CPT1A-204ENST00000538994 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.15
CPT1A-204ENST00000538994 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
CPT1A-204ENST00000538994 POGKQ9P215 609 aa16■□□□□ 0.15
CPT1A-204ENST00000538994 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
CPT1A-204ENST00000538994 MINK1Q8N4C8 1332 aaPredicted RBP15.99■□□□□ 0.15
CPT1A-204ENST00000538994 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
CPT1A-204ENST00000538994 COL22A1Q8NFW1 1626 aaPredicted RBP15.98■□□□□ 0.15
CPT1A-204ENST00000538994 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
CPT1A-204ENST00000538994 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
CPT1A-204ENST00000538994 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
CPT1A-204ENST00000538994 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.15
CPT1A-204ENST00000538994 KIF1AQ12756 1690 aa15.95■□□□□ 0.14
CPT1A-204ENST00000538994 AFF2P51816 1311 aa15.95■□□□□ 0.14
CPT1A-204ENST00000538994 WASLO00401 505 aaPredicted RBP15.95■□□□□ 0.14
CPT1A-204ENST00000538994 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
CPT1A-204ENST00000538994 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
CPT1A-204ENST00000538994 ANKARQ7Z5J8 1434 aa15.94■□□□□ 0.14
CPT1A-204ENST00000538994 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
CPT1A-204ENST00000538994 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
CPT1A-204ENST00000538994 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
CPT1A-204ENST00000538994 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
CPT1A-204ENST00000538994 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
CPT1A-204ENST00000538994 ATP7BP35670 1465 aa15.91■□□□□ 0.14
CPT1A-204ENST00000538994 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
CPT1A-204ENST00000538994 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
CPT1A-204ENST00000538994 TRPM3Q9HCF6 1732 aaPredicted RBP15.9■□□□□ 0.14
CPT1A-204ENST00000538994 TNS3Q68CZ2 1445 aa15.89■□□□□ 0.13
CPT1A-204ENST00000538994 CDK19Q9BWU1 502 aa15.89■□□□□ 0.13
CPT1A-204ENST00000538994 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
CPT1A-204ENST00000538994 CABLES1Q8TDN4 633 aa15.88■□□□□ 0.13
CPT1A-204ENST00000538994 NUDT16Q96DE0 195 aaKnown RBP15.88■□□□□ 0.13
CPT1A-204ENST00000538994 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
CPT1A-204ENST00000538994 NGLY1Q96IV0 654 aa15.87■□□□□ 0.13
CPT1A-204ENST00000538994 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
CPT1A-204ENST00000538994 QTRT2Q9H974 415 aaKnown RBP15.86■□□□□ 0.13
CPT1A-204ENST00000538994 TOPAZ1Q8N9V7 1692 aa15.86■□□□□ 0.13
CPT1A-204ENST00000538994 ALS2Q96Q42 1657 aa15.86■□□□□ 0.13
CPT1A-204ENST00000538994 MARF1Q9Y4F3 1742 aaKnown RBP15.85■□□□□ 0.13
CPT1A-204ENST00000538994 PSME1Q06323 249 aa15.85■□□□□ 0.13
CPT1A-204ENST00000538994 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
CPT1A-204ENST00000538994 ABCA3Q99758 1704 aa15.85■□□□□ 0.13
CPT1A-204ENST00000538994 RXRBP28702 533 aa15.84■□□□□ 0.13
CPT1A-204ENST00000538994 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
CPT1A-204ENST00000538994 GPRASP1Q5JY77 1395 aa15.84■□□□□ 0.13
CPT1A-204ENST00000538994 QRICH2Q9H0J4 1663 aa15.83■□□□□ 0.13
CPT1A-204ENST00000538994 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
CPT1A-204ENST00000538994 CABP2Q9NPB3 220 aa15.83■□□□□ 0.12
CPT1A-204ENST00000538994 USP21Q9UK80 565 aa15.83■□□□□ 0.12
CPT1A-204ENST00000538994 RGS12O14924 1447 aa15.83■□□□□ 0.12
CPT1A-204ENST00000538994 ATRNO75882 1429 aa15.83■□□□□ 0.12
CPT1A-204ENST00000538994 POLR3AO14802 1390 aaPredicted RBP15.82■□□□□ 0.12
CPT1A-204ENST00000538994 ROCK2O75116 1388 aaKnown RBP15.82■□□□□ 0.12
CPT1A-204ENST00000538994 SLIT2O94813 1529 aa15.82■□□□□ 0.12
CPT1A-204ENST00000538994 CRYBG1Q9Y4K1 1723 aa15.82■□□□□ 0.12
CPT1A-204ENST00000538994 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
CPT1A-204ENST00000538994 ACEP12821 1306 aa15.81■□□□□ 0.12
CPT1A-204ENST00000538994 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
CPT1A-204ENST00000538994 CDK12Q9NYV4 1490 aaPredicted RBP15.81■□□□□ 0.12
CPT1A-204ENST00000538994 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
CPT1A-204ENST00000538994 RBM6P78332 1123 aaKnown RBP15.8■□□□□ 0.12
CPT1A-204ENST00000538994 LMOD2Q6P5Q4 547 aa15.8■□□□□ 0.12
CPT1A-204ENST00000538994 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
CPT1A-204ENST00000538994 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
CPT1A-204ENST00000538994 TONSLQ96HA7 1378 aa15.77■□□□□ 0.12
CPT1A-204ENST00000538994 FAM83GA6ND36 823 aa15.77■□□□□ 0.12
CPT1A-204ENST00000538994 TRPC5Q9UL62 973 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms