RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
SCAPER-203ENST00000538941 TRAK1Q9UPV9 953 aa8.43□□□□□ -1.06
SCAPER-203ENST00000538941 PER1O15534 1290 aaPredicted RBP8.43□□□□□ -1.06
SCAPER-203ENST00000538941 PANK2Q9BZ23 570 aa8.43□□□□□ -1.06
SCAPER-203ENST00000538941 CCDC141Q6ZP82 1450 aa8.43□□□□□ -1.06
SCAPER-203ENST00000538941 GOLGA6L6A8MZA4 724 aa8.42□□□□□ -1.06
SCAPER-203ENST00000538941 MAGI3Q5TCQ9 1506 aa8.42□□□□□ -1.06
SCAPER-203ENST00000538941 COL17A1Q9UMD9 1497 aaPredicted RBP8.42□□□□□ -1.06
SCAPER-203ENST00000538941 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
SCAPER-203ENST00000538941 REC8O95072 547 aa8.42□□□□□ -1.06
SCAPER-203ENST00000538941 KIF3BO15066 747 aa8.42□□□□□ -1.06
SCAPER-203ENST00000538941 SAFB2Q14151 953 aaKnown RBP eCLIP8.42□□□□□ -1.06
SCAPER-203ENST00000538941 FOXD4L5Q5VV16 416 aaPredicted RBP8.42□□□□□ -1.06
SCAPER-203ENST00000538941 FOXD4L4Q8WXT5 416 aaPredicted RBP8.42□□□□□ -1.06
SCAPER-203ENST00000538941 TERF2IPQ9NYB0 399 aa8.42□□□□□ -1.06
SCAPER-203ENST00000538941 PTPRGP23470 1445 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 ARHGEF11O15085 1522 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 HMMRO75330 724 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 RABEP1Q15276 862 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 INTS3Q68E01 1043 aaKnown RBP8.41□□□□□ -1.06
SCAPER-203ENST00000538941 DRC7Q8IY82 874 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 SENP3Q9H4L4 574 aaPredicted RBP8.41□□□□□ -1.06
SCAPER-203ENST00000538941 GPRASP1Q5JY77 1395 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 ARHGAP5Q13017 1502 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 TNPO1Q92973 898 aaKnown RBP8.41□□□□□ -1.06
SCAPER-203ENST00000538941 GCC1Q96CN9 775 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 RAPGEF6Q8TEU7 1601 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 EIF2AK4Q9P2K8 1649 aaKnown RBP8.41□□□□□ -1.06
SCAPER-203ENST00000538941 MTHFSP49914 203 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 EVC2Q86UK5 1308 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 GOLGA6L4A6NEF3 574 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 RIPK4P57078 832 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
SCAPER-203ENST00000538941 NUP160Q12769 1436 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 ASXL1Q8IXJ9 1541 aa8.41□□□□□ -1.06
SCAPER-203ENST00000538941 UQCRHLA0A096LP55 91 aa8.4□□□□□ -1.06
SCAPER-203ENST00000538941 SEC24BO95487 1268 aa8.4□□□□□ -1.06
SCAPER-203ENST00000538941 UQCRHP07919 91 aa8.4□□□□□ -1.06
SCAPER-203ENST00000538941 LMOD3Q0VAK6 560 aa8.4□□□□□ -1.06
SCAPER-203ENST00000538941 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
SCAPER-203ENST00000538941 ATF7IPQ6VMQ6 1270 aa8.4□□□□□ -1.06
SCAPER-203ENST00000538941 MBD3O95983 291 aa8.4□□□□□ -1.07
SCAPER-203ENST00000538941 ADGRL2O95490 1459 aa8.4□□□□□ -1.07
SCAPER-203ENST00000538941 CHD1LQ86WJ1 897 aa8.4□□□□□ -1.07
SCAPER-203ENST00000538941 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.07
SCAPER-203ENST00000538941 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
SCAPER-203ENST00000538941 API5Q9BZZ5 524 aaKnown RBP8.39□□□□□ -1.07
SCAPER-203ENST00000538941 CWC22Q9HCG8 908 aaKnown RBP8.39□□□□□ -1.07
SCAPER-203ENST00000538941 NUP153P49790 1475 aaKnown RBP8.39□□□□□ -1.07
SCAPER-203ENST00000538941 TAF7LQ5H9L4 462 aa8.39□□□□□ -1.07
SCAPER-203ENST00000538941 MBD5Q9P267 1494 aa8.39□□□□□ -1.07
SCAPER-203ENST00000538941 ADGBQ8N7X0 1667 aa8.39□□□□□ -1.07
SCAPER-203ENST00000538941 NOL8Q76FK4 1167 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 TESK2Q96S53 571 aa8.38□□□□□ -1.07
SCAPER-203ENST00000538941 SCAF11Q99590 1463 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 ZRSR1Q15695 479 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 POLR1AO95602 1720 aaPredicted RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
SCAPER-203ENST00000538941 DIAPH1O60610 1272 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 HMGN5P82970 282 aaKnown RBP8.38□□□□□ -1.07
SCAPER-203ENST00000538941 PLB1Q6P1J6 1458 aa8.38□□□□□ -1.07
SCAPER-203ENST00000538941 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 STK26Q9P289 416 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 DENND4BO75064 1496 aaPredicted RBP8.37□□□□□ -1.07
SCAPER-203ENST00000538941 FAM135AQ9P2D6 1515 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 TRIM6-TRIM34B2RNG4 842 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 NRDCO43847 1150 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 TSPY26PQ9H489 355 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 RNF214Q8ND24 703 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 ATP6V1DQ9Y5K8 247 aa8.37□□□□□ -1.07
SCAPER-203ENST00000538941 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 BCORL1Q5H9F3 1711 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
SCAPER-203ENST00000538941 HOMEZQ8IX15 550 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 SNX21Q969T3 373 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 ZMYM3Q14202 1370 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 NSD3Q9BZ95 1437 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 KCNJ4P48050 445 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 KLHL40Q2TBA0 621 aa8.36□□□□□ -1.07
SCAPER-203ENST00000538941 SSFA2P28290 1259 aa8.35□□□□□ -1.07
SCAPER-203ENST00000538941 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
SCAPER-203ENST00000538941 DIAPH3Q9NSV4 1193 aa8.35□□□□□ -1.07
SCAPER-203ENST00000538941 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
SCAPER-203ENST00000538941 GNAI1P63096 354 aa8.35□□□□□ -1.07
SCAPER-203ENST00000538941 NCBP3Q53F19 620 aaKnown RBP8.35□□□□□ -1.07
SCAPER-203ENST00000538941 SASS6Q6UVJ0 657 aa8.35□□□□□ -1.07
SCAPER-203ENST00000538941 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
SCAPER-203ENST00000538941 KIAA0556O60303 1618 aa8.35□□□□□ -1.07
SCAPER-203ENST00000538941 MCM5P33992 734 aa8.34□□□□□ -1.07
SCAPER-203ENST00000538941 MCM2P49736 904 aa8.34□□□□□ -1.07
SCAPER-203ENST00000538941 OS9Q13438 667 aaPredicted RBP8.34□□□□□ -1.07
SCAPER-203ENST00000538941 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
SCAPER-203ENST00000538941 GGT6Q6P531 493 aa8.34□□□□□ -1.07
SCAPER-203ENST00000538941 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
SCAPER-203ENST00000538941 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
SCAPER-203ENST00000538941 TPM3P06753 285 aa8.34□□□□□ -1.07
SCAPER-203ENST00000538941 RAB3GAP1Q15042 981 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms