RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TRIM32Q13049 653 aa6.3□□□□□ -1.4
CBX3P4-201ENST00000538909 METTL3Q86U44 580 aaKnown RBP6.3□□□□□ -1.4
CBX3P4-201ENST00000538909 ZSCAN1Q8NBB4 408 aa6.3□□□□□ -1.4
CBX3P4-201ENST00000538909 NLRP7Q8WX94 980 aa6.3□□□□□ -1.4
CBX3P4-201ENST00000538909 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
CBX3P4-201ENST00000538909 VEGFBP49765 207 aa6.29□□□□□ -1.4
CBX3P4-201ENST00000538909 BRICD5Q6PL45 260 aa6.29□□□□□ -1.4
CBX3P4-201ENST00000538909 RNF19BQ6ZMZ0 732 aa6.29□□□□□ -1.4
CBX3P4-201ENST00000538909 ARHGEF1Q92888 912 aaKnown RBP6.28□□□□□ -1.4
CBX3P4-201ENST00000538909 KCNV2Q8TDN2 545 aa6.27□□□□□ -1.41
CBX3P4-201ENST00000538909 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
CBX3P4-201ENST00000538909 DAXXQ9UER7 740 aaPredicted RBP6.27□□□□□ -1.41
CBX3P4-201ENST00000538909 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
CBX3P4-201ENST00000538909 SUZ12Q15022 739 aaKnown RBP6.26□□□□□ -1.41
CBX3P4-201ENST00000538909 MSS51Q4VC12 460 aa6.26□□□□□ -1.41
CBX3P4-201ENST00000538909 BMP1P13497 986 aa6.25□□□□□ -1.41
CBX3P4-201ENST00000538909 GCGRP47871 477 aa6.25□□□□□ -1.41
CBX3P4-201ENST00000538909 IRF7Q92985 503 aa6.25□□□□□ -1.41
CBX3P4-201ENST00000538909 SALL2Q9Y467 1007 aaPredicted RBP6.25□□□□□ -1.41
CBX3P4-201ENST00000538909 ALDH1A1P00352 501 aa6.24□□□□□ -1.41
CBX3P4-201ENST00000538909 RC3H1Q5TC82 1133 aaKnown RBP6.24□□□□□ -1.41
CBX3P4-201ENST00000538909 CCDC24Q8N4L8 307 aa6.24□□□□□ -1.41
CBX3P4-201ENST00000538909 REPIN1Q9BWE0 567 aaKnown RBP6.24□□□□□ -1.41
CBX3P4-201ENST00000538909 ERBB4Q15303 1308 aa6.23□□□□□ -1.41
CBX3P4-201ENST00000538909 SKOR1P84550 965 aa6.22□□□□□ -1.41
CBX3P4-201ENST00000538909 HIC1Q14526 733 aa6.22□□□□□ -1.41
CBX3P4-201ENST00000538909 TRIM46Q7Z4K8 759 aa6.22□□□□□ -1.41
CBX3P4-201ENST00000538909 MMP16P51512 607 aa6.21□□□□□ -1.42
CBX3P4-201ENST00000538909 H3BM21 787 aa6.2□□□□□ -1.42
CBX3P4-201ENST00000538909 SEMA3EO15041 775 aa6.2□□□□□ -1.42
CBX3P4-201ENST00000538909 Q3C1V9 767 aa6.2□□□□□ -1.42
CBX3P4-201ENST00000538909 GRIPAP1Q4V328 841 aa6.2□□□□□ -1.42
CBX3P4-201ENST00000538909 SULF1Q8IWU6 871 aa6.2□□□□□ -1.42
CBX3P4-201ENST00000538909 CAPN5O15484 640 aaPredicted RBP6.19□□□□□ -1.42
CBX3P4-201ENST00000538909 DXOO77932 396 aaKnown RBP6.19□□□□□ -1.42
CBX3P4-201ENST00000538909 WNT7BP56706 349 aa6.18□□□□□ -1.42
CBX3P4-201ENST00000538909 RBM26Q5T8P6 1007 aaKnown RBP6.18□□□□□ -1.42
CBX3P4-201ENST00000538909 NPAS3Q8IXF0 933 aa6.18□□□□□ -1.42
CBX3P4-201ENST00000538909 USB1Q9BQ65 265 aaKnown RBP6.18□□□□□ -1.42
CBX3P4-201ENST00000538909 GNPATO15228 680 aa6.17□□□□□ -1.42
CBX3P4-201ENST00000538909 KCTD17Q8N5Z5 321 aa6.17□□□□□ -1.42
CBX3P4-201ENST00000538909 PHOX2BQ99453 314 aa6.17□□□□□ -1.42
CBX3P4-201ENST00000538909 WASF2Q9Y6W5 498 aa6.17□□□□□ -1.42
CBX3P4-201ENST00000538909 EHBP1Q8NDI1 1231 aa6.16□□□□□ -1.42
CBX3P4-201ENST00000538909 HLA-CQ95604 372 aa6.16□□□□□ -1.42
CBX3P4-201ENST00000538909 TSHZ2Q9NRE2 1034 aa6.16□□□□□ -1.42
CBX3P4-201ENST00000538909 ZFP42Q96MM3 310 aa6.15□□□□□ -1.42
CBX3P4-201ENST00000538909 SOBPA7XYQ1 873 aa6.13□□□□□ -1.43
CBX3P4-201ENST00000538909 SIAH2O43255 324 aa6.13□□□□□ -1.43
CBX3P4-201ENST00000538909 GPR37O15354 613 aa6.12□□□□□ -1.43
CBX3P4-201ENST00000538909 KDM4AO75164 1064 aa6.12□□□□□ -1.43
CBX3P4-201ENST00000538909 GUCA2AQ02747 115 aa6.11□□□□□ -1.43
CBX3P4-201ENST00000538909 PTCRAQ6ISU1 281 aaPredicted RBP6.11□□□□□ -1.43
CBX3P4-201ENST00000538909 CD46P15529 392 aa6.1□□□□□ -1.43
CBX3P4-201ENST00000538909 JUNDP17535 347 aa6.1□□□□□ -1.43
CBX3P4-201ENST00000538909 SYMPKQ92797 1274 aaKnown RBP6.1□□□□□ -1.43
CBX3P4-201ENST00000538909 PURBQ96QR8 312 aaKnown RBP6.1□□□□□ -1.43
CBX3P4-201ENST00000538909 TLL2Q9Y6L7 1015 aa6.1□□□□□ -1.43
CBX3P4-201ENST00000538909 KCNMA1Q12791 1236 aa6.09□□□□□ -1.43
CBX3P4-201ENST00000538909 P3H3Q8IVL6 736 aa6.09□□□□□ -1.43
CBX3P4-201ENST00000538909 NUDT12Q9BQG2 462 aa6.09□□□□□ -1.43
CBX3P4-201ENST00000538909 GSK3AP49840 483 aa6.08□□□□□ -1.44
CBX3P4-201ENST00000538909 SH3BP2P78314 561 aa6.08□□□□□ -1.44
CBX3P4-201ENST00000538909 SCARF1Q14162 830 aa6.08□□□□□ -1.44
CBX3P4-201ENST00000538909 LINC01559Q495D7 138 aa6.08□□□□□ -1.44
CBX3P4-201ENST00000538909 MRPL14Q6P1L8 145 aaKnown RBP6.08□□□□□ -1.44
CBX3P4-201ENST00000538909 TESPA1A2RU30 521 aaPredicted RBP6.07□□□□□ -1.44
CBX3P4-201ENST00000538909 HOXA2O43364 376 aa6.07□□□□□ -1.44
CBX3P4-201ENST00000538909 TMEM151AQ8N4L1 468 aa6.07□□□□□ -1.44
CBX3P4-201ENST00000538909 GDF11O95390 407 aa6.06□□□□□ -1.44
CBX3P4-201ENST00000538909 VSIG8P0DPA2 414 aa6.06□□□□□ -1.44
CBX3P4-201ENST00000538909 NNTQ13423 1086 aa6.06□□□□□ -1.44
CBX3P4-201ENST00000538909 SMYD5Q6GMV2 418 aa6.06□□□□□ -1.44
CBX3P4-201ENST00000538909 WDR4P57081 412 aaKnown RBP6.05□□□□□ -1.44
CBX3P4-201ENST00000538909 USP46P62068 366 aa6.05□□□□□ -1.44
CBX3P4-201ENST00000538909 RASSF7Q02833 373 aa6.05□□□□□ -1.44
CBX3P4-201ENST00000538909 MAN1A2O60476 641 aa6.04□□□□□ -1.44
CBX3P4-201ENST00000538909 TIMP2P16035 220 aa6.04□□□□□ -1.44
CBX3P4-201ENST00000538909 MDM2Q00987 491 aaPredicted RBP6.04□□□□□ -1.44
CBX3P4-201ENST00000538909 C6orf118Q5T5N4 469 aa6.04□□□□□ -1.44
CBX3P4-201ENST00000538909 CCNYL3P0C7X3 344 aa6.03□□□□□ -1.44
CBX3P4-201ENST00000538909 BAP1Q92560 729 aa6.03□□□□□ -1.44
CBX3P4-201ENST00000538909 PLEKHG3A1L390 1219 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 PPFIA3O75145 1194 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 ADH1CP00326 375 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 MS4A1P11836 297 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 RETREG3Q86VR2 466 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 GPIHBP1Q8IV16 184 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 UNC93B1Q9H1C4 597 aa6.02□□□□□ -1.45
CBX3P4-201ENST00000538909 C6orf229H3BNL8 230 aa6□□□□□ -1.45
CBX3P4-201ENST00000538909 GPAT2Q6NUI2 795 aa6□□□□□ -1.45
CBX3P4-201ENST00000538909 CNTNAP3BQ96NU0 1288 aa6□□□□□ -1.45
CBX3P4-201ENST00000538909 CNTNAP3Q9BZ76 1288 aa6□□□□□ -1.45
CBX3P4-201ENST00000538909 ZFAND3Q9H8U3 227 aa6□□□□□ -1.45
CBX3P4-201ENST00000538909 ADAMTS8Q9UP79 889 aa6□□□□□ -1.45
CBX3P4-201ENST00000538909 VARSP26640 1264 aaKnown RBP5.99□□□□□ -1.45
CBX3P4-201ENST00000538909 KRT76Q01546 638 aa5.99□□□□□ -1.45
CBX3P4-201ENST00000538909 ARID5BQ14865 1188 aa5.99□□□□□ -1.45
CBX3P4-201ENST00000538909 ZNF511Q8NB15 262 aa5.99□□□□□ -1.45
CBX3P4-201ENST00000538909 RNF225M0QZC1 329 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms