RNA–Protein interactions for RNA: ENST00000538162.3

PNMA6B-201, Transcript of PNMA family member 6B (pseudogene), humanhuman

BASIC

Gene PNMA6B, Length 1,200 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6B-201ENST00000538162 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.26
PNMA6B-201ENST00000538162 C1orf167Q5SNV9 1468 aa29.2■■■□□ 2.26
PNMA6B-201ENST00000538162 KIAA1210Q9ULL0 1709 aa29.2■■■□□ 2.26
PNMA6B-201ENST00000538162 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.26
PNMA6B-201ENST00000538162 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.26
PNMA6B-201ENST00000538162 NEUROD1Q13562 356 aa29.14■■■□□ 2.26
PNMA6B-201ENST00000538162 PRAM1Q96QH2 718 aa29.13■■■□□ 2.25
PNMA6B-201ENST00000538162 L3MBTL2Q969R5 705 aa29.12■■■□□ 2.25
PNMA6B-201ENST00000538162 TRAK1Q9UPV9 953 aa29.12■■■□□ 2.25
PNMA6B-201ENST00000538162 JCADQ9P266 1359 aa29.11■■■□□ 2.25
PNMA6B-201ENST00000538162 ARHGEF28Q8N1W1 1705 aaKnown RBP29.11■■■□□ 2.25
PNMA6B-201ENST00000538162 POGKQ9P215 609 aa29.1■■■□□ 2.25
PNMA6B-201ENST00000538162 SAFB2Q14151 953 aaKnown RBP eCLIP29.09■■■□□ 2.25
PNMA6B-201ENST00000538162 SHPRHQ149N8 1683 aa29.09■■■□□ 2.25
PNMA6B-201ENST00000538162 ORAI2Q96SN7 254 aa29.08■■■□□ 2.25
PNMA6B-201ENST00000538162 ADGRB2O60241 1585 aa29.07■■■□□ 2.24
PNMA6B-201ENST00000538162 DDX17Q92841 729 aaKnown RBP29.05■■■□□ 2.24
PNMA6B-201ENST00000538162 RGPD8O14715 1765 aaPredicted RBP29.04■■■□□ 2.24
PNMA6B-201ENST00000538162 NUTM2FA1L443 756 aa29.03■■■□□ 2.24
PNMA6B-201ENST00000538162 ESCO1Q5FWF5 840 aa29.03■■■□□ 2.24
PNMA6B-201ENST00000538162 TRPM1Q7Z4N2 1603 aa29.02■■■□□ 2.24
PNMA6B-201ENST00000538162 NBPF1Q3BBV0 1214 aa29.01■■■□□ 2.23
PNMA6B-201ENST00000538162 KIF1AQ12756 1690 aa29■■■□□ 2.23
PNMA6B-201ENST00000538162 PHF23Q9BUL5 403 aaPredicted RBP28.99■■■□□ 2.23
PNMA6B-201ENST00000538162 MINK1Q8N4C8 1332 aaPredicted RBP28.97■■■□□ 2.23
PNMA6B-201ENST00000538162 LRRC59Q96AG4 307 aaKnown RBP28.97■■■□□ 2.23
PNMA6B-201ENST00000538162 SPATA31A6Q5VVP1 1343 aa28.96■■■□□ 2.23
PNMA6B-201ENST00000538162 USP32Q8NFA0 1604 aa28.96■■■□□ 2.23
PNMA6B-201ENST00000538162 HIRIP3Q9BW71 556 aaPredicted RBP28.96■■■□□ 2.23
PNMA6B-201ENST00000538162 PCGF6Q9BYE7 350 aa28.96■■■□□ 2.23
PNMA6B-201ENST00000538162 SOS2Q07890 1332 aaPredicted RBP28.95■■■□□ 2.23
PNMA6B-201ENST00000538162 NPHP3Q7Z494 1330 aa28.94■■■□□ 2.22
PNMA6B-201ENST00000538162 TONSLQ96HA7 1378 aa28.94■■■□□ 2.22
PNMA6B-201ENST00000538162 LRP6O75581 1613 aa28.93■■■□□ 2.22
PNMA6B-201ENST00000538162 ANKARQ7Z5J8 1434 aa28.93■■■□□ 2.22
PNMA6B-201ENST00000538162 ILDR2Q71H61 639 aa28.92■■■□□ 2.22
PNMA6B-201ENST00000538162 PXDNQ92626 1479 aa28.91■■■□□ 2.22
PNMA6B-201ENST00000538162 FOXO3O43524 673 aa28.91■■■□□ 2.22
PNMA6B-201ENST00000538162 EIF3AQ14152 1382 aaKnown RBP28.9■■■□□ 2.22
PNMA6B-201ENST00000538162 PNPLA6Q8IY17 1366 aa28.9■■■□□ 2.22
PNMA6B-201ENST00000538162 TULP4Q9NRJ4 1543 aa28.9■■■□□ 2.22
PNMA6B-201ENST00000538162 WASLO00401 505 aaPredicted RBP28.89■■■□□ 2.22
PNMA6B-201ENST00000538162 PHF8Q9UPP1 1060 aa28.87■■■□□ 2.21
PNMA6B-201ENST00000538162 ROCK2O75116 1388 aaKnown RBP28.87■■■□□ 2.21
PNMA6B-201ENST00000538162 QRICH2Q9H0J4 1663 aa28.86■■■□□ 2.21
PNMA6B-201ENST00000538162 NBPF8Q3BBV2 869 aa28.86■■■□□ 2.21
PNMA6B-201ENST00000538162 XPCQ01831 940 aaPredicted RBP28.85■■■□□ 2.21
PNMA6B-201ENST00000538162 ITSN1Q15811 1721 aa28.85■■■□□ 2.21
PNMA6B-201ENST00000538162 COL22A1Q8NFW1 1626 aaPredicted RBP28.84■■■□□ 2.21
PNMA6B-201ENST00000538162 NUTM2BA6NNL0 878 aaPredicted RBP28.83■■■□□ 2.21
PNMA6B-201ENST00000538162 NUTM2EB1AL46 878 aaPredicted RBP28.83■■■□□ 2.21
PNMA6B-201ENST00000538162 NUTM2AQ8IVF1 878 aaPredicted RBP28.83■■■□□ 2.21
PNMA6B-201ENST00000538162 PRR36Q9H6K5 1346 aa28.83■■■□□ 2.21
PNMA6B-201ENST00000538162 CENPJQ9HC77 1338 aaPredicted RBP28.83■■■□□ 2.21
PNMA6B-201ENST00000538162 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
PNMA6B-201ENST00000538162 RGS17Q9UGC6 210 aaPredicted RBP28.82■■■□□ 2.2
PNMA6B-201ENST00000538162 ATP7BP35670 1465 aa28.8■■■□□ 2.2
PNMA6B-201ENST00000538162 GPRASP1Q5JY77 1395 aa28.79■■■□□ 2.2
PNMA6B-201ENST00000538162 KRT28Q7Z3Y7 464 aa28.78■■■□□ 2.2
PNMA6B-201ENST00000538162 PMFBP1Q8TBY8 1022 aa28.78■■■□□ 2.2
PNMA6B-201ENST00000538162 RALGAPBQ86X10 1494 aa28.78■■■□□ 2.2
PNMA6B-201ENST00000538162 TOPAZ1Q8N9V7 1692 aa28.77■■■□□ 2.2
PNMA6B-201ENST00000538162 CDK19Q9BWU1 502 aa28.77■■■□□ 2.2
PNMA6B-201ENST00000538162 CLSPNQ9HAW4 1339 aa28.74■■■□□ 2.19
PNMA6B-201ENST00000538162 PSME1Q06323 249 aa28.74■■■□□ 2.19
PNMA6B-201ENST00000538162 NUDT16Q96DE0 195 aaKnown RBP28.74■■■□□ 2.19
PNMA6B-201ENST00000538162 SPATA31A3Q5VYP0 1347 aa28.73■■■□□ 2.19
PNMA6B-201ENST00000538162 TRPM3Q9HCF6 1732 aaPredicted RBP28.72■■■□□ 2.19
PNMA6B-201ENST00000538162 TNS3Q68CZ2 1445 aa28.72■■■□□ 2.19
PNMA6B-201ENST00000538162 SBNO1A3KN83 1393 aa28.71■■■□□ 2.19
PNMA6B-201ENST00000538162 MARF1Q9Y4F3 1742 aaKnown RBP28.7■■■□□ 2.19
PNMA6B-201ENST00000538162 CARD11Q9BXL7 1154 aa28.7■■■□□ 2.18
PNMA6B-201ENST00000538162 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
PNMA6B-201ENST00000538162 ADAMTS2O95450 1211 aa28.68■■■□□ 2.18
PNMA6B-201ENST00000538162 NGDNQ8NEJ9 315 aaKnown RBP28.68■■■□□ 2.18
PNMA6B-201ENST00000538162 SRPK2P78362 688 aaKnown RBP28.67■■■□□ 2.18
PNMA6B-201ENST00000538162 ZNF772Q68DY9 489 aaPredicted RBP28.66■■■□□ 2.18
PNMA6B-201ENST00000538162 C8orf37Q96NL8 207 aa28.66■■■□□ 2.18
PNMA6B-201ENST00000538162 CCDC61Q9Y6R9 512 aa28.66■■■□□ 2.18
PNMA6B-201ENST00000538162 ALS2Q96Q42 1657 aa28.66■■■□□ 2.18
PNMA6B-201ENST00000538162 ABCA3Q99758 1704 aa28.64■■■□□ 2.18
PNMA6B-201ENST00000538162 CABP2Q9NPB3 220 aa28.64■■■□□ 2.18
PNMA6B-201ENST00000538162 AFF2P51816 1311 aa28.64■■■□□ 2.17
PNMA6B-201ENST00000538162 ARHGEF10O15013 1369 aa28.63■■■□□ 2.17
PNMA6B-201ENST00000538162 EVC2Q86UK5 1308 aa28.63■■■□□ 2.17
PNMA6B-201ENST00000538162 LMOD2Q6P5Q4 547 aa28.62■■■□□ 2.17
PNMA6B-201ENST00000538162 POLR3AO14802 1390 aaPredicted RBP28.62■■■□□ 2.17
PNMA6B-201ENST00000538162 SOCS7O14512 581 aa28.61■■■□□ 2.17
PNMA6B-201ENST00000538162 PPIP5K1Q6PFW1 1433 aa28.6■■■□□ 2.17
PNMA6B-201ENST00000538162 PLEKHG3A1L390 1219 aa28.6■■■□□ 2.17
PNMA6B-201ENST00000538162 CCER1Q8TC90 406 aaPredicted RBP28.6■■■□□ 2.17
PNMA6B-201ENST00000538162 NGLY1Q96IV0 654 aa28.6■■■□□ 2.17
PNMA6B-201ENST00000538162 TIMELESSQ9UNS1 1208 aa28.6■■■□□ 2.17
PNMA6B-201ENST00000538162 ACEP12821 1306 aa28.59■■■□□ 2.17
PNMA6B-201ENST00000538162 SBNO2Q9Y2G9 1366 aa28.59■■■□□ 2.17
PNMA6B-201ENST00000538162 PAK3O75914 559 aaPredicted RBP28.55■■■□□ 2.16
PNMA6B-201ENST00000538162 HAP1P54257 671 aaPredicted RBP28.54■■■□□ 2.16
PNMA6B-201ENST00000538162 CABLES1Q8TDN4 633 aa28.54■■■□□ 2.16
PNMA6B-201ENST00000538162 CRYBG1Q9Y4K1 1723 aa28.54■■■□□ 2.16
PNMA6B-201ENST00000538162 PLEKHG5O94827 1062 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms