RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 AHDC1Q5TGY3 1603 aaPredicted RBP12.26□□□□□ -0.45
SPARC-208ENST00000538026 ILDR2Q71H61 639 aa12.25□□□□□ -0.45
SPARC-208ENST00000538026 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
SPARC-208ENST00000538026 MED1Q15648 1581 aaPredicted RBP12.25□□□□□ -0.45
SPARC-208ENST00000538026 NHSL1Q5SYE7 1610 aa12.24□□□□□ -0.45
SPARC-208ENST00000538026 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
SPARC-208ENST00000538026 PRAM1Q96QH2 718 aa12.24□□□□□ -0.45
SPARC-208ENST00000538026 DISP3Q9P2K9 1392 aa12.24□□□□□ -0.45
SPARC-208ENST00000538026 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
SPARC-208ENST00000538026 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
SPARC-208ENST00000538026 CDC42BPGQ6DT37 1551 aa12.23□□□□□ -0.45
SPARC-208ENST00000538026 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
SPARC-208ENST00000538026 SAFB2Q14151 953 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPARC-208ENST00000538026 RGS17Q9UGC6 210 aaPredicted RBP12.22□□□□□ -0.45
SPARC-208ENST00000538026 KIAA1210Q9ULL0 1709 aa12.22□□□□□ -0.45
SPARC-208ENST00000538026 FMN2Q9NZ56 1722 aa12.21□□□□□ -0.45
SPARC-208ENST00000538026 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
SPARC-208ENST00000538026 NBPF8Q3BBV2 869 aa12.21□□□□□ -0.45
SPARC-208ENST00000538026 ARHGEF28Q8N1W1 1705 aaKnown RBP12.2□□□□□ -0.46
SPARC-208ENST00000538026 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
SPARC-208ENST00000538026 LRP6O75581 1613 aa12.19□□□□□ -0.46
SPARC-208ENST00000538026 JCADQ9P266 1359 aa12.18□□□□□ -0.46
SPARC-208ENST00000538026 SOS2Q07890 1332 aaPredicted RBP12.18□□□□□ -0.46
SPARC-208ENST00000538026 HIRIP3Q9BW71 556 aaPredicted RBP12.18□□□□□ -0.46
SPARC-208ENST00000538026 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
SPARC-208ENST00000538026 SHPRHQ149N8 1683 aa12.17□□□□□ -0.46
SPARC-208ENST00000538026 PCGF6Q9BYE7 350 aa12.17□□□□□ -0.46
SPARC-208ENST00000538026 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
SPARC-208ENST00000538026 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
SPARC-208ENST00000538026 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
SPARC-208ENST00000538026 POGKQ9P215 609 aa12.16□□□□□ -0.46
SPARC-208ENST00000538026 ADGRB2O60241 1585 aa12.16□□□□□ -0.46
SPARC-208ENST00000538026 PXDNQ92626 1479 aa12.15□□□□□ -0.46
SPARC-208ENST00000538026 FOXO3O43524 673 aa12.15□□□□□ -0.46
SPARC-208ENST00000538026 PNPLA6Q8IY17 1366 aa12.15□□□□□ -0.46
SPARC-208ENST00000538026 XPCQ01831 940 aaPredicted RBP12.14□□□□□ -0.47
SPARC-208ENST00000538026 WASLO00401 505 aaPredicted RBP12.13□□□□□ -0.47
SPARC-208ENST00000538026 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
SPARC-208ENST00000538026 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
SPARC-208ENST00000538026 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
SPARC-208ENST00000538026 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
SPARC-208ENST00000538026 GPRASP1Q5JY77 1395 aa12.1□□□□□ -0.47
SPARC-208ENST00000538026 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
SPARC-208ENST00000538026 CDK19Q9BWU1 502 aa12.1□□□□□ -0.47
SPARC-208ENST00000538026 ANKARQ7Z5J8 1434 aa12.1□□□□□ -0.47
SPARC-208ENST00000538026 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
SPARC-208ENST00000538026 ATP7BP35670 1465 aa12.09□□□□□ -0.47
SPARC-208ENST00000538026 NUTM2BA6NNL0 878 aaPredicted RBP12.09□□□□□ -0.47
SPARC-208ENST00000538026 NUTM2EB1AL46 878 aaPredicted RBP12.09□□□□□ -0.47
SPARC-208ENST00000538026 KRT28Q7Z3Y7 464 aa12.09□□□□□ -0.47
SPARC-208ENST00000538026 NUTM2AQ8IVF1 878 aaPredicted RBP12.09□□□□□ -0.47
SPARC-208ENST00000538026 TULP4Q9NRJ4 1543 aa12.09□□□□□ -0.47
SPARC-208ENST00000538026 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
SPARC-208ENST00000538026 EP400Q96L91 3159 aa12.09□□□□□ -0.47
SPARC-208ENST00000538026 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
SPARC-208ENST00000538026 NUDT16Q96DE0 195 aaKnown RBP12.08□□□□□ -0.48
SPARC-208ENST00000538026 SPATA31A3Q5VYP0 1347 aa12.08□□□□□ -0.48
SPARC-208ENST00000538026 CENPJQ9HC77 1338 aaPredicted RBP12.08□□□□□ -0.48
SPARC-208ENST00000538026 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
SPARC-208ENST00000538026 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
SPARC-208ENST00000538026 TRPM3Q9HCF6 1732 aaPredicted RBP12.07□□□□□ -0.48
SPARC-208ENST00000538026 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
SPARC-208ENST00000538026 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
SPARC-208ENST00000538026 RALGAPBQ86X10 1494 aa12.06□□□□□ -0.48
SPARC-208ENST00000538026 TOPAZ1Q8N9V7 1692 aa12.06□□□□□ -0.48
SPARC-208ENST00000538026 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
SPARC-208ENST00000538026 ADAMTS2O95450 1211 aa12.04□□□□□ -0.48
SPARC-208ENST00000538026 SBNO1A3KN83 1393 aa12.04□□□□□ -0.48
SPARC-208ENST00000538026 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
SPARC-208ENST00000538026 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
SPARC-208ENST00000538026 PSME1Q06323 249 aa12.03□□□□□ -0.48
SPARC-208ENST00000538026 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
SPARC-208ENST00000538026 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
SPARC-208ENST00000538026 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
SPARC-208ENST00000538026 SOCS7O14512 581 aa12.02□□□□□ -0.49
SPARC-208ENST00000538026 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
SPARC-208ENST00000538026 CARD11Q9BXL7 1154 aa12.02□□□□□ -0.49
SPARC-208ENST00000538026 AFF2P51816 1311 aa12.02□□□□□ -0.49
SPARC-208ENST00000538026 ITSN1Q15811 1721 aa12.02□□□□□ -0.49
SPARC-208ENST00000538026 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
SPARC-208ENST00000538026 EIF3AQ14152 1382 aaKnown RBP12.02□□□□□ -0.49
SPARC-208ENST00000538026 MARF1Q9Y4F3 1742 aaKnown RBP12.01□□□□□ -0.49
SPARC-208ENST00000538026 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
SPARC-208ENST00000538026 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
SPARC-208ENST00000538026 ACEP12821 1306 aa12.01□□□□□ -0.49
SPARC-208ENST00000538026 ABCA3Q99758 1704 aa12□□□□□ -0.49
SPARC-208ENST00000538026 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
SPARC-208ENST00000538026 TESK2Q96S53 571 aa12□□□□□ -0.49
SPARC-208ENST00000538026 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
SPARC-208ENST00000538026 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
SPARC-208ENST00000538026 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
SPARC-208ENST00000538026 CABP1Q9NZU7 370 aa11.99□□□□□ -0.49
SPARC-208ENST00000538026 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
SPARC-208ENST00000538026 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
SPARC-208ENST00000538026 SBNO2Q9Y2G9 1366 aa11.98□□□□□ -0.49
SPARC-208ENST00000538026 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
SPARC-208ENST00000538026 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
SPARC-208ENST00000538026 SSH2Q76I76 1423 aa11.97□□□□□ -0.49
SPARC-208ENST00000538026 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
SPARC-208ENST00000538026 ZNF772Q68DY9 489 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms